FFCP PHASE1:Hg19::chr14:24047434..24047457,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84502 | |EntrezGene=84502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20156 | |HGNC=20156 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000543864_5end | |association_with_transcript=-5bp_to_ENST00000543864_5end | ||
|cluster_id=chr14:24047434..24047457,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_JPH4_5end | |description=CAGE_peak_3_at_JPH4_5end | ||
|id=chr14:24047434..24047457,- | |id=chr14:24047434..24047457,- | ||
|ontology_enrichment_celltype=CL:0000047!3.39e-12!8;CL:0000540!1.18e-09!6;CL:0000031!1.18e-09!6;CL:0000404!1.18e-09!6;CL:0002322!7.99e-09!5 | |ontology_enrichment_celltype=CL:0000047!3.39e-12!8;CL:0000540!1.18e-09!6;CL:0000031!1.18e-09!6;CL:0000404!1.18e-09!6;CL:0002322!7.99e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000540;4.01e-13;6!CL:0000404;4.01e-13;6!CL:0002322;4.71e-12;5!CL:0002321;1.92e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.05e-16,8;CL:0000540,4.35e-13,6;CL:0000031,4.35e-13,6;CL:0000404,4.35e-13,6;CL:0002322,6.62e-12,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.38e-15;82!CL:0000031;4.01e-13;6!UBERON:0006215;3.45e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.38e-50;32!UBERON:0001893;4.78e-49;34!UBERON:0003528;1.82e-48;34!UBERON:0002020;1.82e-48;34!UBERON:0002619;3.42e-48;22!UBERON:0002791;2.99e-47;32!UBERON:0001950;1.74e-43;20!UBERON:0000956;7.72e-42;25!UBERON:0000203;7.72e-42;25!UBERON:0002780;6.52e-41;41!UBERON:0001890;6.52e-41;41!UBERON:0000073;7.68e-38;53!UBERON:0002616;7.68e-38;53!UBERON:0000955;2.30e-26;68!UBERON:0001017;8.06e-26;75!UBERON:0001016;5.80e-24;83!UBERON:0002420;1.53e-16;9!UBERON:0007245;1.53e-16;9!UBERON:0010009;1.53e-16;9!UBERON:0010011;1.53e-16;9!UBERON:0000454;1.53e-16;9!UBERON:0000125;1.29e-15;9!UBERON:0002308;1.29e-15;9!UBERON:0000200;5.43e-15;6!UBERON:0000349;2.54e-13;5!UBERON:0004732;6.85e-13;13!UBERON:0001872;7.49e-13;5!UBERON:0001871;1.07e-12;6!UBERON:0002021;3.47e-12;5!UBERON:0009663;4.55e-12;7!UBERON:0007023;3.45e-11;114!UBERON:0004733;5.08e-11;12!UBERON:0002028;5.08e-11;12!UBERON:0000369;7.18e-11;4!UBERON:0002435;7.18e-11;4!UBERON:0000204;7.18e-11;4!UBERON:0000922;1.86e-09;49!UBERON:0011216;2.51e-09;132!UBERON:0002298;6.15e-09;6!UBERON:0002680;6.97e-09;9!UBERON:0001895;6.97e-09;9!UBERON:0005383;1.76e-08;3!UBERON:0005382;1.76e-08;3!UBERON:0001870;2.20e-08;3!UBERON:0000988;3.31e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.09e-76,89;UBERON:0001017,1.87e-72,81;UBERON:0000073,4.10e-66,53;UBERON:0002616,4.10e-66,53;UBERON:0001049,3.58e-65,56;UBERON:0005068,3.58e-65,56;UBERON:0006241,3.58e-65,56;UBERON:0007135,3.58e-65,56;UBERON:0000955,3.94e-57,68;UBERON:0006238,3.94e-57,68;UBERON:0001869,5.34e-57,32;UBERON:0001893,6.99e-57,34;UBERON:0003528,1.73e-56,34;UBERON:0002020,1.73e-56,34;UBERON:0002780,2.78e-56,41;UBERON:0001890,2.78e-56,41;UBERON:0003080,2.78e-56,41;UBERON:0006240,2.78e-56,41;UBERON:0002791,1.12e-52,32;UBERON:0002619,3.18e-48,22;UBERON:0002346,4.26e-47,86;UBERON:0003075,2.61e-45,82;UBERON:0007284,2.61e-45,82;UBERON:0001950,1.77e-43,20;UBERON:0000956,7.24e-42,25;UBERON:0000203,7.24e-42,25;UBERON:0003056,1.36e-39,61;UBERON:0004121,7.01e-37,171;UBERON:0000924,7.01e-37,171;UBERON:0006601,7.01e-37,171;UBERON:0007023,3.56e-33,114;UBERON:0010371,3.91e-33,104;UBERON:0011216,7.66e-27,223;UBERON:0010314,5.40e-25,132;UBERON:0002420,1.46e-16,9;UBERON:0007245,1.46e-16,9;UBERON:0010009,1.46e-16,9;UBERON:0010011,1.46e-16,9;UBERON:0000454,1.46e-16,9;UBERON:0000125,9.51e-16,9;UBERON:0002308,9.51e-16,9;UBERON:0000200,5.57e-15,6;UBERON:0000349,2.28e-13,5;UBERON:0004732,5.68e-13,13;UBERON:0001872,7.41e-13,5;UBERON:0001871,1.18e-12,6;UBERON:0002021,3.35e-12,5;UBERON:0009663,4.29e-12,7;UBERON:0000025,1.08e-11,192;UBERON:0004733,4.47e-11,12;UBERON:0002028,4.47e-11,12;UBERON:0007277,4.47e-11,12;UBERON:0000369,7.02e-11,4;UBERON:0002435,7.02e-11,4;UBERON:0000204,7.02e-11,4;UBERON:0010082,7.02e-11,4;UBERON:0003076,8.81e-11,15;UBERON:0003057,8.81e-11,15;UBERON:0002680,5.59e-09,9;UBERON:0001895,5.59e-09,9;UBERON:0010092,5.59e-09,9;UBERON:0002298,5.89e-09,6;UBERON:0005383,1.76e-08,3;UBERON:0005382,1.76e-08,3;UBERON:0001870,2.04e-08,3;UBERON:0000922,5.61e-08,592;UBERON:0004111,7.50e-08,240;UBERON:0000988,2.73e-07,3 | |||
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| ||
|short_description=p3@JPH4 | |short_description=p3@JPH4 | ||
}} | }} |
Latest revision as of 12:22, 19 September 2015
Short description: | p3@JPH4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_JPH4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -5bp_to_ENST00000543864_5end |
EntrezGene: | JPH4 |
HGNC: | 20156 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.05e-16 | 8 |
neuron | 4.35e-13 | 6 |
neuroblast | 4.35e-13 | 6 |
electrically signaling cell | 4.35e-13 | 6 |
embryonic stem cell | 6.62e-12 | 5 |