FFCP PHASE1:Hg19::chr14:33441162..33441165,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:33441162..33441165,+ | |||
|description=CAGE_peak_at_chr14:33441162..33441165,+ | |description=CAGE_peak_at_chr14:33441162..33441165,+ | ||
|id=chr14:33441162..33441165,+ | |id=chr14:33441162..33441165,+ | ||
|ontology_enrichment_celltype=CL:0002605!1.65e-09!3 | |ontology_enrichment_celltype=CL:0002605!1.65e-09!3 | ||
|ontology_enrichment_celltype_v019=CL:0002605;9.45e-18;3!CL:0000128;2.18e-08;7!CL:0000126;2.18e-08;7!CL:0000127;2.18e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,8.00e-18,3;CL:0000128,2.03e-08,7;CL:0000126,2.03e-08,7;CL:0000127,2.03e-08,7;CL:0002453,2.03e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.46e-50;1!UBERON:0003056;6.76e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!1.64e-37!41;UBERON:0001890!1.64e-37!41;UBERON:0006240!1.64e-37!41;UBERON:0001049!3.05e-37!57;UBERON:0005068!3.05e-37!57;UBERON:0006241!3.05e-37!57;UBERON:0007135!3.05e-37!57;UBERON:0003080!1.85e-36!42;UBERON:0002020!4.61e-36!34;UBERON:0003528!4.61e-36!34;UBERON:0002616!1.07e-35!59;UBERON:0001893!1.08e-35!34;UBERON:0000955!4.79e-35!69;UBERON:0006238!4.79e-35!69;UBERON:0002791!1.19e-33!33;UBERON:0001869!2.01e-31!32;UBERON:0001017!4.39e-30!82;UBERON:0005743!2.90e-28!86;UBERON:0002346!2.29e-27!90;UBERON:0003075!4.03e-27!86;UBERON:0007284!4.03e-27!86;UBERON:0000073!1.35e-26!94;UBERON:0001016!1.35e-26!94;UBERON:0003056!7.61e-25!61;UBERON:0007023!1.68e-23!115;UBERON:0000956!3.32e-23!25;UBERON:0000203!3.32e-23!25;UBERON:0000033!8.16e-21!123;UBERON:0000153!2.17e-19!129;UBERON:0007811!2.17e-19!129;UBERON:0000924!4.83e-17!173;UBERON:0006601!4.83e-17!173;UBERON:0002619!5.40e-17!22;UBERON:0004121!1.43e-16!169;UBERON:0002308!8.94e-15!9;UBERON:0000125!8.94e-15!9;UBERON:0001950!4.27e-13!20;UBERON:0002298!6.12e-12!8;UBERON:0002420!6.09e-11!9;UBERON:0007245!6.09e-11!9;UBERON:0010009!6.09e-11!9;UBERON:0010011!6.09e-11!9;UBERON:0000454!6.09e-11!9;UBERON:0009663!4.63e-10!7;UBERON:0000349!1.99e-09!5;UBERON:0006331!2.11e-09!3;UBERON:0000988!1.24e-08!3;UBERON:0000200!1.65e-07!6;UBERON:0000475!3.48e-07!365;UBERON:0004732!4.31e-07!13;UBERON:0001954!5.64e-07!2;UBERON:0003022!5.64e-07!2;UBERON:0002421!5.64e-07!2;UBERON:0002600!5.64e-07!2;UBERON:0000369!8.24e-07!4;UBERON:0002435!8.24e-07!4;UBERON:0000204!8.24e-07!4;UBERON:0010082!8.24e-07!4;UBERON:0002148!9.08e-07!2;UBERON:0009662!9.08e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.46e-50;1!UBERON:0001785;1.46e-50;1!UBERON:0002464;1.46e-50;1!UBERON:0004904;1.46e-50;1!UBERON:0001021;1.46e-50;1!UBERON:0003714;4.32e-26;2!UBERON:0005162;4.32e-26;2!UBERON:0000122;4.32e-26;2!UBERON:0002148;7.14e-26;2!UBERON:0006331;7.14e-26;2!UBERON:0009662;7.14e-26;2!UBERON:0000988;9.45e-18;3!UBERON:0004732;2.63e-16;13!UBERON:0002298;1.44e-09;6!UBERON:0000010;7.48e-07;8!UBERON:0002680;8.37e-07;9!UBERON:0000125;8.37e-07;9!UBERON:0002308;8.37e-07;9!UBERON:0001895;8.37e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.46e-50,1;UBERON:0001785,1.46e-50,1;UBERON:0002464,1.46e-50,1;UBERON:0004904,1.46e-50,1;UBERON:0001021,1.46e-50,1;UBERON:0003902,1.46e-50,1;UBERON:0005425,1.46e-50,1;UBERON:0003714,4.32e-26,2;UBERON:0005162,4.32e-26,2;UBERON:0000122,4.32e-26,2;UBERON:0002148,9.18e-26,2;UBERON:0006331,9.18e-26,2;UBERON:0009662,9.18e-26,2;UBERON:0000988,1.12e-17,3;UBERON:0004732,2.84e-16,13;UBERON:0001781,8.82e-14,4;UBERON:0000966,1.22e-09,6;UBERON:0005388,1.22e-09,6;UBERON:0001802,1.22e-09,6;UBERON:0002298,1.57e-09,6;UBERON:0000010,7.48e-07,8;UBERON:0002680,8.85e-07,9;UBERON:0000125,8.85e-07,9;UBERON:0002308,8.85e-07,9;UBERON:0001895,8.85e-07,9;UBERON:0010092,8.85e-07,9 | |||
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| ||
|short_description=p@chr14:33441162..33441165,+ | |short_description=p@chr14:33441162..33441165,+ | ||
}} | }} |
Latest revision as of 20:13, 24 July 2015
Short description: | p@chr14:33441162..33441165, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:33441162..33441165, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 8.00e-18 | 3 |
oligodendrocyte | 2.03e-08 | 7 |
macroglial cell | 2.03e-08 | 7 |
astrocyte | 2.03e-08 | 7 |
oligodendrocyte precursor cell | 2.03e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.46e-50 | 1 |
cranial nerve | 1.46e-50 | 1 |
nerve trunk | 1.46e-50 | 1 |
nerve connecting eye with brain | 1.46e-50 | 1 |
nerve | 1.46e-50 | 1 |
retinal neural layer | 1.46e-50 | 1 |
presumptive neural retina | 1.46e-50 | 1 |
neural tissue | 4.32e-26 | 2 |
multi cell component structure | 4.32e-26 | 2 |
neuron projection bundle | 4.32e-26 | 2 |
locus ceruleus | 9.18e-26 | 2 |
brainstem nucleus | 9.18e-26 | 2 |
hindbrain nucleus | 9.18e-26 | 2 |
pons | 1.12e-17 | 3 |
segmental subdivision of nervous system | 2.84e-16 | 13 |
layer of retina | 8.82e-14 | 4 |
retina | 1.22e-09 | 6 |
photoreceptor array | 1.22e-09 | 6 |
posterior segment of eyeball | 1.22e-09 | 6 |
brainstem | 1.57e-09 | 6 |
peripheral nervous system | 7.48e-07 | 8 |
regional part of metencephalon | 8.85e-07 | 9 |
neural nucleus | 8.85e-07 | 9 |
nucleus of brain | 8.85e-07 | 9 |
metencephalon | 8.85e-07 | 9 |
future metencephalon | 8.85e-07 | 9 |