FFCP PHASE1:Hg19::chr10:104629450..104629461,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:104629450..104629461,+
|short_description=p3@AS3MT
|description=CAGE_peak_3_at_AS3MT_5end
|association_with_transcript=-100bp_to_AB590972,BC160057_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57412 | |EntrezGene=57412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=17452 | |HGNC=17452 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-100bp_to_AB590972,BC160057_5end | |||
|cluster_id=chr10:104629450..104629461,+ | |||
|coexpression_cluster_id=C228 | |||
|description=CAGE_peak_3_at_AS3MT_5end | |||
|id=chr10:104629450..104629461,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.40e-10!5;CL:0000181!1.25e-07!12;CL:0000417!1.25e-07!12;CL:0000668!1.25e-07!12;CL:0000414!1.25e-07!12;CL:0000412!1.25e-07!12;CL:0000182!1.25e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.97e-34;12!CL:0002563;6.78e-18;4!CL:0000511;8.01e-18;1!CL:0002625;8.01e-18;1!CL:0000216;8.01e-18;1!CL:0002322;3.59e-14;5!CL:0002253;7.97e-10;2!CL:0000148;1.52e-07;10!CL:0002231;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.30e-34,12;CL:0000511,5.26e-18,1;CL:0002625,5.26e-18,1;CL:0000216,5.26e-18,1;CL:0002563,6.79e-18,4;CL:0000223,1.10e-17,58;CL:0002322,2.95e-14,5;CL:0002253,7.98e-10,2;CL:0000148,1.37e-07,10;CL:0000541,1.37e-07,10;CL:0002321,4.86e-07,250;CL:0000066,5.23e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.42e-37;11!UBERON:0009497;1.22e-31;13!UBERON:0003104;4.27e-19;31!UBERON:0001041;8.42e-14;30!CL:0000223;1.88e-11;58 | |||
|ontology_enrichment_disease=DOID:3095!3.41e-07!22;DOID:2994!3.41e-07!22 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:7,4.58e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0005057!2.70e-09!26;UBERON:0005743!6.56e-08!86;UBERON:0000073!6.86e-08!94;UBERON:0001016!6.86e-08!94;UBERON:0003929!7.34e-08!54;UBERON:0001017!8.47e-08!82;UBERON:0002107!2.86e-07!19;UBERON:0006925!2.86e-07!19;UBERON:0008836!2.86e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;6.11e-31;19!UBERON:0006925;6.11e-31;19!UBERON:0002423;1.64e-23;25!UBERON:0001242;6.78e-18;4!UBERON:0001262;6.78e-18;4!UBERON:0004786;6.78e-18;4!UBERON:0004808;6.78e-18;4!UBERON:0001277;6.78e-18;4!UBERON:0002365;7.56e-18;31!UBERON:0002330;7.56e-18;31!UBERON:0001136;8.01e-18;1!UBERON:0001343;8.01e-18;1!UBERON:0004910;8.01e-18;1!UBERON:0004813;8.01e-18;1!UBERON:0002368;2.86e-17;33!UBERON:0000949;1.99e-11;43!UBERON:0000485;1.21e-10;7!UBERON:0003929;1.21e-10;7!UBERON:0002530;8.99e-10;57!UBERON:0004909;1.38e-09;2!UBERON:0003350;1.98e-09;8!UBERON:0002417;2.74e-08;58!UBERON:0000916;2.74e-08;58!UBERON:0005172;3.51e-07;52!UBERON:0005173;3.51e-07;52!UBERON:0001007;4.67e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.45e-31,19;UBERON:0006925,6.45e-31,19;UBERON:0008836,6.45e-31,19;UBERON:0008835,1.06e-26,22;UBERON:0003894,1.06e-26,22;UBERON:0009854,1.54e-25,23;UBERON:0003929,4.59e-24,54;UBERON:0007499,1.71e-23,25;UBERON:0009497,1.71e-23,25;UBERON:0000015,1.71e-23,25;UBERON:0002423,1.71e-23,25;UBERON:0006235,1.71e-23,25;UBERON:0004161,1.71e-23,25;UBERON:0009856,1.38e-22,26;UBERON:0002365,6.21e-19,31;UBERON:0002330,6.21e-19,31;UBERON:0001136,5.26e-18,1;UBERON:0001343,5.26e-18,1;UBERON:0004910,5.26e-18,1;UBERON:0005154,5.26e-18,1;UBERON:0005295,5.26e-18,1;UBERON:0004813,5.26e-18,1;UBERON:0005297,5.26e-18,1;UBERON:0005294,5.26e-18,1;UBERON:0010141,5.26e-18,1;UBERON:0005891,5.26e-18,1;UBERON:0001242,6.79e-18,4;UBERON:0001262,6.79e-18,4;UBERON:0004786,6.79e-18,4;UBERON:0004808,6.79e-18,4;UBERON:0001277,6.79e-18,4;UBERON:0002368,9.29e-17,35;UBERON:0005911,1.22e-15,82;UBERON:0002530,2.90e-13,59;UBERON:0000949,5.28e-13,45;UBERON:0005172,8.32e-11,54;UBERON:0005173,8.32e-11,54;UBERON:0004921,1.47e-10,118;UBERON:0000490,2.23e-10,148;UBERON:0002417,1.05e-09,60;UBERON:0000916,1.05e-09,60;UBERON:0004909,1.12e-09,2;UBERON:0003350,1.99e-09,8;UBERON:0000485,1.77e-08,9;UBERON:0001007,1.84e-08,145;UBERON:0001555,1.84e-08,145;UBERON:0007026,1.84e-08,145;UBERON:0005256,4.61e-08,122;UBERON:0003104,1.22e-07,160;UBERON:0009142,1.22e-07,160;UBERON:0004119,1.34e-07,160;UBERON:0000925,1.34e-07,160;UBERON:0006595,1.34e-07,160 | |||
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| ||
|short_description=p3@AS3MT | |||
}} | }} |
Latest revision as of 02:41, 16 September 2015
Short description: | p3@AS3MT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AS3MT_5end |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | -100bp_to_AB590972, BC160057_5end |
EntrezGene: | AS3MT |
HGNC: | 17452 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.30e-34 | 12 |
androgen binding protein secreting cell | 5.26e-18 | 1 |
seminiferous tubule epithelial cell | 5.26e-18 | 1 |
Sertoli cell | 5.26e-18 | 1 |
intestinal epithelial cell | 6.79e-18 | 4 |
endodermal cell | 1.10e-17 | 58 |
embryonic stem cell | 2.95e-14 | 5 |
epithelial cell of large intestine | 7.98e-10 | 2 |
melanocyte | 1.37e-07 | 10 |
melanoblast | 1.37e-07 | 10 |
embryonic cell | 4.86e-07 | 250 |
epithelial cell | 5.23e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 4.58e-07 | 39 |