FFCP PHASE1:Hg19::chr15:51973935..51973946,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29106 | |EntrezGene=29106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13707 | |HGNC=13707 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=206bp_to_ENST00000558709_5end | |association_with_transcript=206bp_to_ENST00000558709_5end | ||
|cluster_id=chr15:51973935..51973946,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_SCG3_5end | |description=CAGE_peak_5_at_SCG3_5end | ||
|id=chr15:51973935..51973946,+ | |id=chr15:51973935..51973946,+ | ||
|ontology_enrichment_celltype=CL:0002322!3.10e-13!5;CL:0000047!5.88e-08!8;CL:0000540!2.01e-07!6;CL:0000031!2.01e-07!6;CL:0000404!2.01e-07!6 | |ontology_enrichment_celltype=CL:0002322!3.10e-13!5;CL:0000047!5.88e-08!8;CL:0000540!2.01e-07!6;CL:0000031!2.01e-07!6;CL:0000404!2.01e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.38e-13;5!CL:0000540;3.58e-07;6!CL:0000404;3.58e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.45e-13,5;CL:0000540,3.82e-07,6;CL:0000031,3.82e-07,6;CL:0000404,3.82e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.19e-13;3!UBERON:0006601;3.29e-13;82!CL:0000031;3.58e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;3.15e-49;32!UBERON:0001893;1.43e-48;34!UBERON:0002791;3.85e-45;32!UBERON:0003528;1.58e-43;34!UBERON:0002020;1.58e-43;34!UBERON:0002619;5.06e-42;22!UBERON:0000073;1.45e-40;53!UBERON:0002616;1.45e-40;53!UBERON:0002780;3.06e-39;41!UBERON:0001890;3.06e-39;41!UBERON:0000956;1.00e-36;25!UBERON:0000203;1.00e-36;25!UBERON:0001950;5.73e-35;20!UBERON:0001017;8.42e-26;75!UBERON:0000200;9.58e-24;6!UBERON:0000955;3.60e-23;68!UBERON:0004733;2.96e-20;12!UBERON:0002028;2.96e-20;12!UBERON:0001016;5.65e-20;83!UBERON:0004732;1.34e-18;13!UBERON:0002298;6.25e-16;6!UBERON:0002420;1.14e-15;9!UBERON:0007245;1.14e-15;9!UBERON:0010009;1.14e-15;9!UBERON:0010011;1.14e-15;9!UBERON:0000454;1.14e-15;9!UBERON:0000125;2.22e-15;9!UBERON:0002308;2.22e-15;9!UBERON:0007023;1.92e-14;114!UBERON:0009663;3.91e-14;7!UBERON:0000349;1.12e-13;5!UBERON:0001870;2.69e-13;3!UBERON:0001872;8.55e-13;5!UBERON:0001896;3.45e-12;3!UBERON:0005290;3.45e-12;3!UBERON:0002680;2.56e-11;9!UBERON:0001895;2.56e-11;9!UBERON:0000369;8.34e-10;4!UBERON:0002435;8.34e-10;4!UBERON:0000204;8.34e-10;4!UBERON:0001954;1.16e-09;2!UBERON:0003022;1.16e-09;2!UBERON:0002421;1.16e-09;2!UBERON:0002600;1.16e-09;2!UBERON:0002702;3.05e-09;2!UBERON:0002771;5.63e-09;2!UBERON:0011216;9.17e-09;132!UBERON:0001875;1.09e-08;2!UBERON:0006514;1.09e-08;2!UBERON:0002021;2.63e-08;5!UBERON:0002037;5.07e-07;6 | |||
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| ||
|short_description=p5@SCG3 | |short_description=p5@SCG3 | ||
}} | }} |
Latest revision as of 01:09, 18 September 2015
Short description: | p5@SCG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SCG3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 206bp_to_ENST00000558709_5end |
EntrezGene: | SCG3 |
HGNC: | 13707 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.45e-13 | 5 |
neuron | 3.82e-07 | 6 |
neuroblast | 3.82e-07 | 6 |
electrically signaling cell | 3.82e-07 | 6 |