FFCP PHASE1:Hg19::chr11:118023594..118023635,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6330 | |EntrezGene=6330 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10592 | |HGNC=10592 | ||
|TSSclassifier=strong | |||
|UniProt=E9PPT5,Q8IWT1,B0YJ93 | |UniProt=E9PPT5,Q8IWT1,B0YJ93 | ||
|association_with_transcript=0bp_to_ENST00000529878,NM_001142348,NM_174934,uc001pse.2,uc010rxv.1_5end | |association_with_transcript=0bp_to_ENST00000529878,NM_001142348,NM_174934,uc001pse.2,uc010rxv.1_5end | ||
|cluster_id=chr11:118023594..118023635,- | |||
|coexpression_cluster_id=C3089 | |||
|description=CAGE_peak_2_at_SCN4B_5end | |description=CAGE_peak_2_at_SCN4B_5end | ||
|id=chr11:118023594..118023635,- | |id=chr11:118023594..118023635,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.42e-15;82!UBERON:0006215;6.11e-08;3!UBERON:0006241;3.47e-07;3!UBERON:0003057;3.47e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.27e-53!115;UBERON:0001049!1.06e-44!57;UBERON:0005068!1.06e-44!57;UBERON:0006241!1.06e-44!57;UBERON:0007135!1.06e-44!57;UBERON:0001017!1.50e-37!82;UBERON:0003075!8.79e-37!86;UBERON:0007284!8.79e-37!86;UBERON:0002616!1.92e-36!59;UBERON:0005743!3.41e-36!86;UBERON:0002346!2.54e-35!90;UBERON:0000955!1.11e-33!69;UBERON:0006238!1.11e-33!69;UBERON:0000073!7.56e-33!94;UBERON:0001016!7.56e-33!94;UBERON:0004121!3.27e-32!169;UBERON:0000924!1.28e-31!173;UBERON:0006601!1.28e-31!173;UBERON:0002780!5.04e-31!41;UBERON:0001890!5.04e-31!41;UBERON:0006240!5.04e-31!41;UBERON:0000153!1.75e-30!129;UBERON:0007811!1.75e-30!129;UBERON:0003080!6.19e-30!42;UBERON:0002020!1.01e-29!34;UBERON:0003528!1.01e-29!34;UBERON:0001893!1.54e-29!34;UBERON:0000033!1.20e-28!123;UBERON:0001869!1.40e-28!32;UBERON:0002791!2.03e-28!33;UBERON:0003056!4.47e-22!61;UBERON:0000956!4.93e-21!25;UBERON:0000203!4.93e-21!25;UBERON:0002619!1.35e-18!22;UBERON:0001950!2.67e-17!20;UBERON:0003076!7.94e-16!15;UBERON:0003057!7.94e-16!15;UBERON:0000064!1.67e-13!219;UBERON:0004733!5.83e-13!12;UBERON:0002028!5.83e-13!12;UBERON:0007277!5.83e-13!12;UBERON:0000119!3.92e-12!312;UBERON:0000483!4.89e-12!309;UBERON:0000481!5.99e-12!347;UBERON:0004732!1.25e-11!13;UBERON:0004111!1.40e-11!241;UBERON:0000475!2.22e-11!365;UBERON:0000477!1.68e-10!286;UBERON:0002308!3.63e-10!9;UBERON:0000125!3.63e-10!9;UBERON:0000062!5.52e-10!511;UBERON:0002680!6.07e-10!9;UBERON:0001895!6.07e-10!9;UBERON:0010092!6.07e-10!9;UBERON:0002420!7.19e-10!9;UBERON:0007245!7.19e-10!9;UBERON:0010009!7.19e-10!9;UBERON:0010011!7.19e-10!9;UBERON:0000454!7.19e-10!9;UBERON:0000025!7.44e-10!194;UBERON:0000922!3.91e-09!612;UBERON:0009663!3.31e-08!7;UBERON:0000200!6.28e-08!6;UBERON:0000923!1.25e-07!604;UBERON:0005291!1.25e-07!604;UBERON:0006598!1.25e-07!604;UBERON:0002532!1.25e-07!604;UBERON:0002050!1.52e-07!605;UBERON:0005423!1.52e-07!605;UBERON:0000468!2.26e-07!659;UBERON:0002037!7.60e-07!6;UBERON:0006215!7.60e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.11e-39;32!UBERON:0003528;1.51e-37;34!UBERON:0002020;1.51e-37;34!UBERON:0001893;1.45e-36;34!UBERON:0002791;5.05e-36;32!UBERON:0000073;2.57e-30;53!UBERON:0002616;2.57e-30;53!UBERON:0000956;5.01e-29;25!UBERON:0000203;5.01e-29;25!UBERON:0001950;2.46e-27;20!UBERON:0002780;3.78e-27;41!UBERON:0001890;3.78e-27;41!UBERON:0002619;1.67e-24;22!UBERON:0001017;9.03e-23;75!UBERON:0000955;1.28e-22;68!UBERON:0004733;4.80e-17;12!UBERON:0002028;4.80e-17;12!UBERON:0001016;7.04e-17;83!UBERON:0004732;1.53e-15;13!UBERON:0000125;1.84e-15;9!UBERON:0002308;1.84e-15;9!UBERON:0002420;5.27e-15;9!UBERON:0007245;5.27e-15;9!UBERON:0010009;5.27e-15;9!UBERON:0010011;5.27e-15;9!UBERON:0000454;5.27e-15;9!UBERON:0000200;1.02e-13;6!UBERON:0002298;2.79e-13;6!UBERON:0009663;7.04e-12;7!UBERON:0007023;7.88e-12;114!UBERON:0002680;1.70e-11;9!UBERON:0001895;1.70e-11;9!UBERON:0000369;3.92e-10;4!UBERON:0002435;3.92e-10;4!UBERON:0000204;3.92e-10;4!UBERON:0005383;4.77e-08;3!UBERON:0005382;4.77e-08;3!UBERON:0001872;5.15e-08;5!UBERON:0002021;6.40e-08;5!UBERON:0001870;1.63e-07;3!UBERON:0001896;1.77e-07;3!UBERON:0005290;1.77e-07;3!UBERON:0000988;1.83e-07;3!UBERON:0001871;1.99e-07;6!UBERON:0002240;3.47e-07;3!UBERON:0005174;3.47e-07;3!UBERON:0001137;3.47e-07;3!UBERON:0004121;4.67e-07;165!UBERON:0011216;5.39e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.72e-62,56;UBERON:0005068,9.72e-62,56;UBERON:0006241,9.72e-62,56;UBERON:0007135,9.72e-62,56;UBERON:0000073,2.88e-56,53;UBERON:0002616,2.88e-56,53;UBERON:0010371,7.72e-51,104;UBERON:0001017,5.41e-49,81;UBERON:0003075,1.15e-48,82;UBERON:0007284,1.15e-48,82;UBERON:0000955,1.82e-47,68;UBERON:0006238,1.82e-47,68;UBERON:0002346,9.60e-46,86;UBERON:0003528,4.58e-43,34;UBERON:0002020,4.58e-43,34;UBERON:0001869,6.17e-43,32;UBERON:0007023,7.83e-43,114;UBERON:0001016,9.58e-43,89;UBERON:0002780,3.51e-40,41;UBERON:0001890,3.51e-40,41;UBERON:0003080,3.51e-40,41;UBERON:0006240,3.51e-40,41;UBERON:0001893,5.61e-40,34;UBERON:0002791,2.26e-39,32;UBERON:0004121,4.92e-37,171;UBERON:0000924,4.92e-37,171;UBERON:0006601,4.92e-37,171;UBERON:0010314,9.17e-32,132;UBERON:0003056,6.94e-30,61;UBERON:0000956,4.30e-29,25;UBERON:0000203,4.30e-29,25;UBERON:0001950,2.05e-27,20;UBERON:0002619,1.41e-24,22;UBERON:0011216,1.00e-22,223;UBERON:0003076,1.79e-22,15;UBERON:0003057,1.79e-22,15;UBERON:0004733,4.28e-17,12;UBERON:0002028,4.28e-17,12;UBERON:0007277,4.28e-17,12;UBERON:0004732,1.38e-15,13;UBERON:0000125,1.53e-15,9;UBERON:0002308,1.53e-15,9;UBERON:0002420,5.11e-15,9;UBERON:0007245,5.11e-15,9;UBERON:0010009,5.11e-15,9;UBERON:0010011,5.11e-15,9;UBERON:0000454,5.11e-15,9;UBERON:0000119,5.69e-15,309;UBERON:0000483,1.35e-14,306;UBERON:0000025,1.83e-14,192;UBERON:0000200,9.92e-14,6;UBERON:0002298,2.15e-13,6;UBERON:0004111,4.12e-12,240;UBERON:0009663,7.77e-12,7;UBERON:0002680,1.46e-11,9;UBERON:0001895,1.46e-11,9;UBERON:0010092,1.46e-11,9;UBERON:0000369,3.94e-10,4;UBERON:0002435,3.94e-10,4;UBERON:0000204,3.94e-10,4;UBERON:0010082,3.94e-10,4;UBERON:0000923,5.23e-09,560;UBERON:0010316,5.23e-09,560;UBERON:0005291,5.23e-09,560;UBERON:0006598,5.23e-09,560;UBERON:0010317,5.23e-09,560;UBERON:0002532,5.23e-09,560;UBERON:0002050,8.56e-09,564;UBERON:0000922,2.30e-08,592;UBERON:0005383,4.84e-08,3;UBERON:0005382,4.84e-08,3;UBERON:0001872,4.95e-08,5;UBERON:0005423,6.43e-08,581;UBERON:0002021,6.53e-08,5;UBERON:0000988,1.31e-07,3;UBERON:0001870,1.67e-07,3;UBERON:0001871,1.75e-07,6;UBERON:0001896,1.90e-07,3;UBERON:0005290,1.90e-07,3;UBERON:0010096,1.90e-07,3;UBERON:0002240,3.91e-07,3;UBERON:0005174,3.91e-07,3;UBERON:0001137,3.91e-07,3 | |||
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| ||
|short_description=p2@SCN4B | |short_description=p2@SCN4B | ||
}} | }} |
Latest revision as of 23:13, 15 September 2015
Short description: | p2@SCN4B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCN4B_5end |
Coexpression cluster: | C3089_caudate_pons_diencephalon_locus_parietal_globus_paracentral |
Association with transcript: | 0bp_to_ENST00000529878, NM_001142348, NM_174934, uc001pse.2, uc010rxv.1_5end |
EntrezGene: | SCN4B |
HGNC: | 10592 |
UniProt: | E9PPT5Q8IWT1B0YJ93 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data