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FFCP PHASE1:Mm9::chr7:146768691..146768707,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14912
|EntrezGene=14912
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=E9Q9J2,D3Z4R4
|UniProt=E9Q9J2,D3Z4R4
|association_with_transcript=0bp_to_ENSMUST00000039606,ENSMUST00000097974,NM_183248,NR_027857,uc012fvu.1_5end
|association_with_transcript=0bp_to_ENSMUST00000039606,ENSMUST00000097974,NM_183248,NR_027857,uc012fvu.1_5end
|cluster_id=chr7:146768691..146768707,-
|description=CAGE_peak_1_at_Nkx6-2_5end
|description=CAGE_peak_1_at_Nkx6-2_5end
|id=chr7:146768691..146768707,-
|id=chr7:146768691..146768707,-
|ontology_enrichment_celltype=CL:0000117!1.24e-07!23;CL:0000337!1.24e-07!23;CL:0002319!1.78e-07!43;CL:0000221!4.45e-07!44;CL:0000133!4.45e-07!44
|ontology_enrichment_celltype=CL:0000117!1.24e-07!23;CL:0000337!1.24e-07!23;CL:0002319!1.78e-07!43;CL:0000221!4.45e-07!44;CL:0000133!4.45e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000117,2.12e-10,23;CL:0000337,2.12e-10,23;CL:0002319,4.84e-08,43;CL:0000221,9.70e-08,44;CL:0000133,9.70e-08,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.27e-18!75;UBERON:0001016!4.27e-18!75;UBERON:0001017!2.38e-17!73;UBERON:0005743!2.38e-17!73;UBERON:0001049!2.21e-14!52;UBERON:0005068!2.21e-14!52;UBERON:0006241!2.21e-14!52;UBERON:0007135!2.21e-14!52;UBERON:0000955!1.38e-13!50;UBERON:0006238!1.38e-13!50;UBERON:0007811!3.95e-13!86;UBERON:0002616!5.36e-13!49;UBERON:0004121!7.13e-12!102;UBERON:0000924!7.13e-12!102;UBERON:0006601!7.13e-12!102;UBERON:0000033!1.35e-11!63;UBERON:0002346!8.16e-11!71;UBERON:0003075!8.16e-11!71;UBERON:0007284!8.16e-11!71;UBERON:0000153!9.10e-11!94;UBERON:0002020!1.08e-10!34;UBERON:0003076!3.85e-09!12;UBERON:0003057!3.85e-09!12;UBERON:0002791!4.22e-08!29;UBERON:0003528!4.22e-08!29;UBERON:0001893!4.22e-08!29;UBERON:0003056!8.03e-08!49;UBERON:0002021!1.00e-07!10;UBERON:0000411!1.00e-07!10;UBERON:0001950!1.00e-07!10;UBERON:0003080!1.18e-07!40;UBERON:0002780!4.43e-07!39;UBERON:0001890!4.43e-07!39;UBERON:0006240!4.43e-07!39
|ontology_enrichment_uberon=UBERON:0000073!4.27e-18!75;UBERON:0001016!4.27e-18!75;UBERON:0001017!2.38e-17!73;UBERON:0005743!2.38e-17!73;UBERON:0001049!2.21e-14!52;UBERON:0005068!2.21e-14!52;UBERON:0006241!2.21e-14!52;UBERON:0007135!2.21e-14!52;UBERON:0000955!1.38e-13!50;UBERON:0006238!1.38e-13!50;UBERON:0007811!3.95e-13!86;UBERON:0002616!5.36e-13!49;UBERON:0004121!7.13e-12!102;UBERON:0000924!7.13e-12!102;UBERON:0006601!7.13e-12!102;UBERON:0000033!1.35e-11!63;UBERON:0002346!8.16e-11!71;UBERON:0003075!8.16e-11!71;UBERON:0007284!8.16e-11!71;UBERON:0000153!9.10e-11!94;UBERON:0002020!1.08e-10!34;UBERON:0003076!3.85e-09!12;UBERON:0003057!3.85e-09!12;UBERON:0002791!4.22e-08!29;UBERON:0003528!4.22e-08!29;UBERON:0001893!4.22e-08!29;UBERON:0003056!8.03e-08!49;UBERON:0002021!1.00e-07!10;UBERON:0000411!1.00e-07!10;UBERON:0001950!1.00e-07!10;UBERON:0003080!1.18e-07!40;UBERON:0002780!4.43e-07!39;UBERON:0001890!4.43e-07!39;UBERON:0006240!4.43e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.14e-27,73;UBERON:0001016,9.30e-26,75;UBERON:0000073,3.68e-23,54;UBERON:0001049,7.14e-21,52;UBERON:0005068,7.14e-21,52;UBERON:0006241,7.14e-21,52;UBERON:0007135,7.14e-21,52;UBERON:0004121,9.11e-19,95;UBERON:0000924,9.11e-19,95;UBERON:0006601,9.11e-19,95;UBERON:0002346,2.58e-16,64;UBERON:0003075,2.58e-16,64;UBERON:0007284,2.58e-16,64;UBERON:0000955,3.39e-16,47;UBERON:0006238,3.39e-16,47;UBERON:0002616,2.81e-15,46;UBERON:0002020,1.26e-14,34;UBERON:0010371,4.16e-13,73;UBERON:0003076,8.93e-13,12;UBERON:0003057,8.93e-13,12;UBERON:0002021,2.79e-12,10;UBERON:0000411,2.79e-12,10;UBERON:0001950,2.79e-12,10;UBERON:0011216,3.92e-11,194;UBERON:0003080,7.61e-11,40;UBERON:0003528,2.11e-10,29;UBERON:0002791,2.11e-10,29;UBERON:0001893,2.11e-10,29;UBERON:0002780,6.68e-10,39;UBERON:0001890,6.68e-10,39;UBERON:0006240,6.68e-10,39;UBERON:0003056,1.09e-08,49;UBERON:0010314,1.68e-08,92;UBERON:0002619,8.39e-08,17;UBERON:0002240,9.74e-08,6;UBERON:0005174,9.74e-08,6;UBERON:0001137,9.74e-08,6;UBERON:0002950,2.74e-07,4;UBERON:0001891,2.74e-07,4;UBERON:0009616,2.74e-07,4;UBERON:0010286,2.74e-07,4;UBERON:0000956,3.88e-07,21;UBERON:0001869,3.88e-07,21;UBERON:0000203,3.88e-07,21
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.14247797122848,0.439372365468944,0,1.25987779462826,8.62515386189829,0,0,0,0,0,0,4.65327859977075,1.5869729378161,3.80298842103708,0,0,0,0,0,6.5912024314049,11.1423308543251,0,0,0,13.4255962669788,5.07997644188711,0.61245399607477,0.479227355091182,0,6.60695285996332,20.5576614317152,25.1914714540239,1.31886287730194,0.457438218012048,0,29.314214895145,20.8222165711722,20.933359945423,1.17851434189467,1.85083185038834,2.05039390407831,0.530083353332288,0.604572480854284,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0.289198713839823,0,0,0,0,1.86391761218122,5.5628351432194,8.79676168616511,0.255457055208591,0,0,0,18.7238299256028,13.7250180845588,0.125654352112864,7.64827008846016,7.41574826257959,21.1943805450751,20.2801578834697,0.101839363850316,0,0,2.31486041475121,0.130120442962704,0.919608417733892,0.360124259610698,0.150704817835715,0,0,0,0.517406741478031,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0.268412837520744,8.83217783969334,0,0,0,0.639864751605702,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,25.2064426280833,35.9839877838064,0,0,0,0,0,0,0,0,0.404810701674894,0,0.395287777946524,4.4984984299053,0,0,0,0.164970122972535,0,1.21390318077491,2.41858845571801,0.754420319023592,0.885905678642318,0.307435147943927,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,0,1.03135543248187,0,1.8006109403131,0.388076051348264,0,0,0,0,0,2.11204537257339,0,0,0,0,0,0,0,0.582961673259701,32.2640025498287,0,0,0,0,0,0,0,0,0,11.4560474161814,5.21954389408873,1.21991680276109,1.08005340821801,0.418176592028937,1.52853794622324,1.21377911746339,1.32245529160537,4.71160695571253,0,0,3.38215763210514,0,0,0,0.516639293910924,0.168956125490778,0,0,0.104859344425711,1.20792060413003,2.30424005006292,3.16011120628178,0.608175645870493,1.54066435747241,1.94881234466693,0.895133478337407,1.39076948346885,0.240390899039938,0.590758108698309,0.302899349844443,0.304827226619999,0.806609481094724,1.94915761479505,2.21287235772758,2.80504565235765,0,0,0,0.335769232728157,0,0.187682475451182,0,0,0,5.0827665835536,1.84130094602871,5.15605962095457,3.26521046453006,6.85082519770642,6.0431511791176,4.05013500139084,3.60256962579376,8.60970577069989,3.10656187051092,2.90604573235695,0.399024873401031,0.512200817262403,0,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.470546902076653,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0.231867835620421
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.14247797122848,0.439372365468944,0,1.25987779462826,8.62515386189829,0,0,0,0,0,0,4.65327859977075,1.5869729378161,3.80298842103708,0,0,0,0,0,6.5912024314049,11.1423308543251,0,0,0,13.4255962669788,5.07997644188711,0.61245399607477,0.479227355091182,0,6.60695285996332,20.5576614317152,25.1914714540239,1.31886287730194,0.457438218012048,0,29.314214895145,20.8222165711722,20.933359945423,1.17851434189467,1.85083185038834,2.05039390407831,0.530083353332288,0.604572480854284,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0.148442139064825,0,0,0,0.150722640552623,0,0,0,0.289198713839823,0,0,0,0,1.86391761218122,5.5628351432194,8.79676168616511,0.255457055208591,0,0,0,18.7238299256028,13.7250180845588,0.125654352112864,7.64827008846016,7.41574826257959,21.1943805450751,20.2801578834697,0.101839363850316,0,0,2.31486041475121,0.130120442962704,0.919608417733892,0.360124259610698,0.150704817835715,0,0,0,0.517406741478031,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0.268412837520744,8.83217783969334,0,0,0,0.639864751605702,0.232236671860439,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,25.2064426280833,35.9839877838064,0,0,0,0,0,0,0,0,0.404810701674894,0,0.395287777946524,4.4984984299053,0,0,0,0.164970122972535,0,1.21390318077491,2.41858845571801,0.754420319023592,0.885905678642318,0.307435147943927,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,0,1.03135543248187,0,1.8006109403131,0.388076051348264,0,0,0,0,0,2.11204537257339,0,0,0,0,0,0,0,0.582961673259701,32.2640025498287,0,0,0,0,0,0,0,0,0,11.4560474161814,5.21954389408873,1.21991680276109,1.08005340821801,0.418176592028937,1.52853794622324,1.21377911746339,1.32245529160537,4.71160695571253,0,0,3.38215763210514,0,0,0,0.516639293910924,0.168956125490778,0,0,0.104859344425711,1.20792060413003,2.30424005006292,3.16011120628178,0.608175645870493,1.54066435747241,1.94881234466693,0.895133478337407,1.39076948346885,0.240390899039938,0.590758108698309,0.302899349844443,0.304827226619999,0.806609481094724,1.94915761479505,2.21287235772758,2.80504565235765,0,0,0,0.335769232728157,0,0.187682475451182,0,0,0,5.0827665835536,1.84130094602871,5.15605962095457,3.26521046453006,6.85082519770642,6.0431511791176,4.05013500139084,3.60256962579376,8.60970577069989,3.10656187051092,2.90604573235695,0.399024873401031,0.512200817262403,0,0.209613162627982,0.551530525350042,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.470546902076653,0.338458431566706,0.365855945745545,0.263069711437843,0.135804113845862,0,0,0.197008964751127,0,0,0.192906610981141,0,0.467863216890817,0.214871054048298,0,0,0.231867835620421
|short_description=p1@Nkx6-2
|short_description=p1@Nkx6-2
}}
}}

Latest revision as of 02:26, 26 September 2015

Short description:p1@Nkx6-2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nkx6-2_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: 0bp_to_ENSMUST00000039606, ENSMUST00000097974, NM_183248, NR_027857, uc012fvu.1_5end
EntrezGene:Nkx6-2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nkx6-2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.13
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C48.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.65
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E811.14
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F320.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D725.19
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E429.31
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E520.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.93
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I28.80
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A418.72
corpus striatum, adult.CNhs10487.19-21D813.73
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D57.65
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F221.19
diencephalon, neonate N30.CNhs11201.1388-42B220.28
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E88.83
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C225.21
medulla oblongata, neonate N30.CNhs11200.1396-42A335.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C932.26
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E35.22
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C51.95
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A21.95
thymus, neonate N25.CNhs11125.1362-25G72.21
thymus, neonate N30.CNhs11132.1393-42G22.81
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.27
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I82.91
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.12e-1023
neuroblast (sensu Vertebrata)2.12e-1023
neural cell4.84e-0843
ectodermal cell9.70e-0844
neurectodermal cell9.70e-0844

Uber anatomy
Ontology termp-valuen
central nervous system8.14e-2773
nervous system9.30e-2675
regional part of nervous system3.68e-2354
neural tube7.14e-2152
neural rod7.14e-2152
future spinal cord7.14e-2152
neural keel7.14e-2152
ectoderm-derived structure9.11e-1995
ectoderm9.11e-1995
presumptive ectoderm9.11e-1995
neurectoderm2.58e-1664
neural plate2.58e-1664
presumptive neural plate2.58e-1664
brain3.39e-1647
future brain3.39e-1647
regional part of brain2.81e-1546
gray matter1.26e-1434
ecto-epithelium4.16e-1373
posterior neural tube8.93e-1312
chordal neural plate8.93e-1312
occipital lobe2.79e-1210
visual cortex2.79e-1210
neocortex2.79e-1210
organ system subdivision3.92e-11194
anterior neural tube7.61e-1140
brain grey matter2.11e-1029
regional part of telencephalon2.11e-1029
telencephalon2.11e-1029
regional part of forebrain6.68e-1039
forebrain6.68e-1039
future forebrain6.68e-1039
pre-chordal neural plate1.09e-0849
structure with developmental contribution from neural crest1.68e-0892
regional part of cerebral cortex8.39e-0817
spinal cord9.74e-086
dorsal region element9.74e-086
dorsum9.74e-086
regional part of midbrain2.74e-074
midbrain2.74e-074
presumptive midbrain2.74e-074
midbrain neural tube2.74e-074
cerebral cortex3.88e-0721
cerebral hemisphere3.88e-0721
pallium3.88e-0721
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