FFCP PHASE1:Mm9::chr7:31077020..31077031,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76686 | |EntrezGene=76686 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=283 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z2W8 | |UniProt=D3Z2W8 | ||
|association_with_transcript=43bp_to_ENSMUST00000144508_5end | |association_with_transcript=43bp_to_ENSMUST00000144508_5end | ||
|cluster_id=chr7:31077020..31077031,+ | |||
|description=CAGE_peak_10_at_Clip3_5end | |description=CAGE_peak_10_at_Clip3_5end | ||
|id=chr7:31077020..31077031,+ | |id=chr7:31077020..31077031,+ | ||
|ontology_enrichment_celltype=CL:0000221!5.02e-15!44;CL:0000133!5.02e-15!44;CL:0002319!1.66e-14!43;CL:0000055!5.31e-14!50;CL:0002453!5.27e-10!8;CL:0000333!4.90e-09!10;CL:0000095!4.90e-09!10;CL:0000243!4.90e-09!10;CL:0000123!4.90e-09!10;CL:0000125!4.90e-09!10;CL:0000030!4.90e-09!10;CL:0000339!4.90e-09!10;CL:0000393!4.42e-08!39;CL:0000211!4.42e-08!39;CL:0002321!4.53e-08!70;CL:0000220!4.53e-08!70;CL:0000540!6.53e-08!33;CL:0000047!6.53e-08!33;CL:0000031!6.53e-08!33;CL:0000404!6.53e-08!33;CL:0000128!1.64e-07!6;CL:0000126!1.64e-07!6;CL:0000127!1.64e-07!6;CL:0000117!9.02e-07!23;CL:0000337!9.02e-07!23 | |ontology_enrichment_celltype=CL:0000221!5.02e-15!44;CL:0000133!5.02e-15!44;CL:0002319!1.66e-14!43;CL:0000055!5.31e-14!50;CL:0002453!5.27e-10!8;CL:0000333!4.90e-09!10;CL:0000095!4.90e-09!10;CL:0000243!4.90e-09!10;CL:0000123!4.90e-09!10;CL:0000125!4.90e-09!10;CL:0000030!4.90e-09!10;CL:0000339!4.90e-09!10;CL:0000393!4.42e-08!39;CL:0000211!4.42e-08!39;CL:0002321!4.53e-08!70;CL:0000220!4.53e-08!70;CL:0000540!6.53e-08!33;CL:0000047!6.53e-08!33;CL:0000031!6.53e-08!33;CL:0000404!6.53e-08!33;CL:0000128!1.64e-07!6;CL:0000126!1.64e-07!6;CL:0000127!1.64e-07!6;CL:0000117!9.02e-07!23;CL:0000337!9.02e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,4.70e-16,8;CL:0000333,1.19e-12,10;CL:0000095,1.19e-12,10;CL:0000243,1.19e-12,10;CL:0000123,1.19e-12,10;CL:0000125,1.19e-12,10;CL:0000030,1.19e-12,10;CL:0000339,1.19e-12,10;CL:0000128,9.56e-11,6;CL:0000126,9.56e-11,6;CL:0000127,9.56e-11,6;CL:0002319,1.26e-09,43;CL:0000221,2.42e-09,44;CL:0000133,2.42e-09,44;CL:0002610,4.07e-09,3;CL:0000878,3.44e-07,2;CL:0000129,3.44e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.65e-36!73;UBERON:0005743!5.65e-36!73;UBERON:0000073!7.51e-36!75;UBERON:0001016!7.51e-36!75;UBERON:0001049!3.97e-28!52;UBERON:0005068!3.97e-28!52;UBERON:0006241!3.97e-28!52;UBERON:0007135!3.97e-28!52;UBERON:0004121!4.24e-27!102;UBERON:0000924!4.24e-27!102;UBERON:0006601!4.24e-27!102;UBERON:0000955!8.22e-27!50;UBERON:0006238!8.22e-27!50;UBERON:0002616!7.60e-26!49;UBERON:0000033!1.44e-24!63;UBERON:0002346!1.23e-22!71;UBERON:0003075!1.23e-22!71;UBERON:0007284!1.23e-22!71;UBERON:0002020!3.19e-19!34;UBERON:0003080!2.74e-16!40;UBERON:0003056!7.65e-16!49;UBERON:0002780!2.40e-15!39;UBERON:0001890!2.40e-15!39;UBERON:0006240!2.40e-15!39;UBERON:0002791!4.11e-15!29;UBERON:0003528!4.11e-15!29;UBERON:0001893!4.11e-15!29;UBERON:0007811!2.29e-14!86;UBERON:0003076!1.57e-13!12;UBERON:0003057!1.57e-13!12;UBERON:0000956!5.38e-13!21;UBERON:0001869!5.38e-13!21;UBERON:0000203!5.38e-13!21;UBERON:0000153!4.76e-12!94;UBERON:0002619!1.17e-11!17;UBERON:0002021!2.95e-11!10;UBERON:0000411!2.95e-11!10;UBERON:0001950!2.95e-11!10;UBERON:0000025!2.12e-09!114;UBERON:0004111!1.72e-08!122;UBERON:0004733!2.75e-08!6;UBERON:0004732!2.75e-08!6;UBERON:0002028!2.75e-08!6;UBERON:0007277!2.75e-08!6;UBERON:0002298!3.75e-08!6;UBERON:0002240!8.37e-07!6;UBERON:0005174!8.37e-07!6;UBERON:0001137!8.37e-07!6 | |ontology_enrichment_uberon=UBERON:0001017!5.65e-36!73;UBERON:0005743!5.65e-36!73;UBERON:0000073!7.51e-36!75;UBERON:0001016!7.51e-36!75;UBERON:0001049!3.97e-28!52;UBERON:0005068!3.97e-28!52;UBERON:0006241!3.97e-28!52;UBERON:0007135!3.97e-28!52;UBERON:0004121!4.24e-27!102;UBERON:0000924!4.24e-27!102;UBERON:0006601!4.24e-27!102;UBERON:0000955!8.22e-27!50;UBERON:0006238!8.22e-27!50;UBERON:0002616!7.60e-26!49;UBERON:0000033!1.44e-24!63;UBERON:0002346!1.23e-22!71;UBERON:0003075!1.23e-22!71;UBERON:0007284!1.23e-22!71;UBERON:0002020!3.19e-19!34;UBERON:0003080!2.74e-16!40;UBERON:0003056!7.65e-16!49;UBERON:0002780!2.40e-15!39;UBERON:0001890!2.40e-15!39;UBERON:0006240!2.40e-15!39;UBERON:0002791!4.11e-15!29;UBERON:0003528!4.11e-15!29;UBERON:0001893!4.11e-15!29;UBERON:0007811!2.29e-14!86;UBERON:0003076!1.57e-13!12;UBERON:0003057!1.57e-13!12;UBERON:0000956!5.38e-13!21;UBERON:0001869!5.38e-13!21;UBERON:0000203!5.38e-13!21;UBERON:0000153!4.76e-12!94;UBERON:0002619!1.17e-11!17;UBERON:0002021!2.95e-11!10;UBERON:0000411!2.95e-11!10;UBERON:0001950!2.95e-11!10;UBERON:0000025!2.12e-09!114;UBERON:0004111!1.72e-08!122;UBERON:0004733!2.75e-08!6;UBERON:0004732!2.75e-08!6;UBERON:0002028!2.75e-08!6;UBERON:0007277!2.75e-08!6;UBERON:0002298!3.75e-08!6;UBERON:0002240!8.37e-07!6;UBERON:0005174!8.37e-07!6;UBERON:0001137!8.37e-07!6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.13e-31,73;UBERON:0001016,2.09e-30,75;UBERON:0000073,1.09e-29,54;UBERON:0001049,5.10e-26,52;UBERON:0005068,5.10e-26,52;UBERON:0006241,5.10e-26,52;UBERON:0007135,5.10e-26,52;UBERON:0004121,1.86e-24,95;UBERON:0000924,1.86e-24,95;UBERON:0006601,1.86e-24,95;UBERON:0002616,2.78e-22,46;UBERON:0002346,5.13e-22,64;UBERON:0003075,5.13e-22,64;UBERON:0007284,5.13e-22,64;UBERON:0000955,1.04e-21,47;UBERON:0006238,1.04e-21,47;UBERON:0010371,1.20e-18,73;UBERON:0002020,9.15e-15,34;UBERON:0003076,2.62e-14,12;UBERON:0003057,2.62e-14,12;UBERON:0003080,4.30e-14,40;UBERON:0010314,1.08e-13,92;UBERON:0003528,3.19e-13,29;UBERON:0002791,3.19e-13,29;UBERON:0001893,3.19e-13,29;UBERON:0002780,1.24e-12,39;UBERON:0001890,1.24e-12,39;UBERON:0006240,1.24e-12,39;UBERON:0003056,2.36e-12,49;UBERON:0004733,3.43e-12,6;UBERON:0004732,3.43e-12,6;UBERON:0002028,3.43e-12,6;UBERON:0007277,3.43e-12,6;UBERON:0002619,2.08e-11,17;UBERON:0000956,6.08e-11,21;UBERON:0001869,6.08e-11,21;UBERON:0000203,6.08e-11,21;UBERON:0002021,2.43e-09,10;UBERON:0000411,2.43e-09,10;UBERON:0001950,2.43e-09,10;UBERON:0004684,4.07e-09,3;UBERON:0002275,4.07e-09,3;UBERON:0000025,4.70e-09,114;UBERON:0004111,4.00e-08,122;UBERON:0011216,4.91e-08,194;UBERON:0001896,2.81e-07,2;UBERON:0002298,2.81e-07,2;UBERON:0005290,2.81e-07,2;UBERON:0010096,2.81e-07,2;UBERON:0002037,6.88e-07,4;UBERON:0002680,6.88e-07,4;UBERON:0001895,6.88e-07,4;UBERON:0010092,6.88e-07,4;UBERON:0006215,6.88e-07,4;UBERON:0002950,9.50e-07,4;UBERON:0001891,9.50e-07,4;UBERON:0009616,9.50e-07,4;UBERON:0010286,9.50e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,2.34717403304412,0.872100625521786,3.07560655828261,1.55543919259427,2.37976916763116,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,4.49400165777607,6.53171119046643,0.207379224616955,0.270011876663381,0,2.57085885963423,2.20868540951614,0,0,0,3.30347642998166,3.19218345212969,2.61131106535614,0,0.182975287204819,0,3.07101298901519,0.56276261003168,2.90316670775939,0.294628585473668,0.427115042397309,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80615036115011,2.93225389538837,0,0,0,0,2.39665023047716,4.57500602818627,0,1.04294592115366,1.53429274398198,2.70124457927428,3.40706652442291,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0,1.03481348295606,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3131894342054,0.308713837137853,0,0,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45872005958493,7.97039468826982,0.327869890753351,0.252470927204373,0.315508219416257,0,0,0.955875191810208,0.891194696329576,0.849229592366497,0.809621403349789,0,0,0.963963949265421,0,0,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,9.08583979851498,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,3.68260189205742,1.14579102687879,2.06223818812425,3.42541259885321,2.2661816921691,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0.532427418478012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,2.34717403304412,0.872100625521786,3.07560655828261,1.55543919259427,2.37976916763116,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,4.49400165777607,6.53171119046643,0.207379224616955,0.270011876663381,0,2.57085885963423,2.20868540951614,0,0,0,3.30347642998166,3.19218345212969,2.61131106535614,0,0.182975287204819,0,3.07101298901519,0.56276261003168,2.90316670775939,0.294628585473668,0.427115042397309,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80615036115011,2.93225389538837,0,0,0,0,2.39665023047716,4.57500602818627,0,1.04294592115366,1.53429274398198,2.70124457927428,3.40706652442291,0.101839363850316,0,0,0,0,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0,1.03481348295606,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3131894342054,0.308713837137853,0,0,0,0,0,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45872005958493,7.97039468826982,0.327869890753351,0.252470927204373,0.315508219416257,0,0,0.955875191810208,0.891194696329576,0.849229592366497,0.809621403349789,0,0,0.963963949265421,0,0,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,9.08583979851498,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,3.68260189205742,1.14579102687879,2.06223818812425,3.42541259885321,2.2661816921691,0.675022500231806,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0.532427418478012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p10@Clip3 | |short_description=p10@Clip3 | ||
}} | }} |
Latest revision as of 14:22, 26 September 2015
Short description: | p10@Clip3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Clip3_5end |
Coexpression cluster: | MCL_coexpression_mm9:283 |
Association with transcript: | 43bp_to_ENSMUST00000144508_5end |
EntrezGene: | Clip3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 4.70e-16 | 8 |
migratory neural crest cell | 1.19e-12 | 10 |
neuron associated cell | 1.19e-12 | 10 |
glial cell (sensu Vertebrata) | 1.19e-12 | 10 |
neuron associated cell (sensu Vertebrata) | 1.19e-12 | 10 |
glial cell | 1.19e-12 | 10 |
glioblast | 1.19e-12 | 10 |
glioblast (sensu Vertebrata) | 1.19e-12 | 10 |
oligodendrocyte | 9.56e-11 | 6 |
macroglial cell | 9.56e-11 | 6 |
astrocyte | 9.56e-11 | 6 |
neural cell | 1.26e-09 | 43 |
ectodermal cell | 2.42e-09 | 44 |
neurectodermal cell | 2.42e-09 | 44 |
raphe nuclei neuron | 4.07e-09 | 3 |
central nervous system macrophage | 3.44e-07 | 2 |
microglial cell | 3.44e-07 | 2 |