FFCP PHASE1:Hg19::chr16:57397539..57397560,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:57397539..57397560,+ | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_at_chr16:57397539..57397560,+ | |description=CAGE_peak_at_chr16:57397539..57397560,+ | ||
|id=chr16:57397539..57397560,+ | |id=chr16:57397539..57397560,+ | ||
|ontology_enrichment_celltype=CL:0000990!4.45e-27!8;CL:0000451!7.00e-22!10;CL:0000453!8.50e-20!5;CL:0000738!5.19e-19!140;CL:0000840!2.65e-16!5;CL:0001029!2.65e-16!5;CL:0002032!4.10e-16!165;CL:0000837!4.10e-16!165;CL:0002031!4.28e-16!124;CL:0000037!3.93e-15!172;CL:0000566!3.93e-15!172;CL:0000988!6.27e-15!182;CL:0002087!3.41e-14!119;CL:0000945!7.11e-11!24;CL:0000826!7.11e-11!24;CL:0000557!1.17e-10!71;CL:0002009!1.53e-10!65;CL:0000235!2.76e-09!10;CL:0000763!3.13e-09!112;CL:0000049!3.13e-09!112;CL:0001014!9.21e-09!2;CL:0001016!9.21e-09!2;CL:0000839!4.13e-08!70;CL:0002194!4.30e-08!63;CL:0000576!4.30e-08!63;CL:0000040!4.30e-08!63;CL:0000559!4.30e-08!63;CL:0000785!7.36e-08!2;CL:0000955!7.36e-08!2;CL:0000818!7.36e-08!2;CL:0000954!7.36e-08!2;CL:0000816!7.36e-08!2;CL:0000542!1.91e-07!53;CL:0000051!1.91e-07!53;CL:0000766!3.18e-07!76 | |ontology_enrichment_celltype=CL:0000990!4.45e-27!8;CL:0000451!7.00e-22!10;CL:0000453!8.50e-20!5;CL:0000738!5.19e-19!140;CL:0000840!2.65e-16!5;CL:0001029!2.65e-16!5;CL:0002032!4.10e-16!165;CL:0000837!4.10e-16!165;CL:0002031!4.28e-16!124;CL:0000037!3.93e-15!172;CL:0000566!3.93e-15!172;CL:0000988!6.27e-15!182;CL:0002087!3.41e-14!119;CL:0000945!7.11e-11!24;CL:0000826!7.11e-11!24;CL:0000557!1.17e-10!71;CL:0002009!1.53e-10!65;CL:0000235!2.76e-09!10;CL:0000763!3.13e-09!112;CL:0000049!3.13e-09!112;CL:0001014!9.21e-09!2;CL:0001016!9.21e-09!2;CL:0000839!4.13e-08!70;CL:0002194!4.30e-08!63;CL:0000576!4.30e-08!63;CL:0000040!4.30e-08!63;CL:0000559!4.30e-08!63;CL:0000785!7.36e-08!2;CL:0000955!7.36e-08!2;CL:0000818!7.36e-08!2;CL:0000954!7.36e-08!2;CL:0000816!7.36e-08!2;CL:0000542!1.91e-07!53;CL:0000051!1.91e-07!53;CL:0000766!3.18e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000990;1.50e-55;8!CL:0000451;2.79e-45;10!CL:0000453;9.31e-40;5!CL:0000840;7.59e-33;5!CL:0000235;6.21e-21;6!CL:0001014;1.27e-16;2!CL:0001016;1.27e-16;2!CL:0000945;4.71e-11;24!CL:0000738;8.21e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,1.61e-55,8;CL:0000451,2.96e-45,10;CL:0000453,1.01e-39,5;CL:0000840,8.11e-33,5;CL:0001029,8.11e-33,5;CL:0000738,2.18e-21,136;CL:0000235,6.37e-21,6;CL:0002032,1.63e-17,161;CL:0000837,1.63e-17,161;CL:0002031,2.07e-17,120;CL:0000037,1.23e-16,168;CL:0001014,1.37e-16,2;CL:0001016,1.37e-16,2;CL:0000988,1.32e-15,177;CL:0002087,4.32e-14,115;CL:0000945,4.46e-11,24;CL:0000826,4.46e-11,24;CL:0002009,6.27e-11,61;CL:0000557,8.03e-10,67;CL:0000763,8.28e-10,108;CL:0000049,8.28e-10,108;CL:0000838,2.16e-08,52;CL:0000542,3.26e-08,53;CL:0000051,3.26e-08,53;CL:0002194,3.10e-07,59;CL:0000576,3.10e-07,59;CL:0000040,3.10e-07,59;CL:0000559,3.10e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!7.37e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:630;5.31e-09;1!DOID:0050177;5.31e-09;1!DOID:0050427;5.31e-09;1!DOID:0060060;6.46e-09;1!DOID:0060061;6.46e-09;1!DOID:8691;6.46e-09;1!DOID:0060058;2.83e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.91e-09,1;DOID:0050177,4.91e-09,1;DOID:0050427,4.91e-09,1;DOID:0060060,6.22e-09,1;DOID:0060061,6.22e-09,1;DOID:8691,6.22e-09,1;DOID:0060058,2.50e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.41e-13!112;UBERON:0002390!9.82e-13!102;UBERON:0003061!9.82e-13!102;UBERON:0004177!3.94e-12!7;UBERON:0002405!6.88e-12!115;UBERON:0002106!9.57e-11!3;UBERON:0004854!9.57e-11!3;UBERON:0009034!9.57e-11!3;UBERON:0002095!9.57e-11!3;UBERON:0004782!9.57e-11!3;UBERON:0003281!9.57e-11!3;UBERON:0009664!9.57e-11!3;UBERON:0002296!9.57e-11!3;UBERON:0005602!9.57e-11!3;UBERON:0001179!9.57e-11!3;UBERON:0006293!9.57e-11!3;UBERON:0002371!4.92e-09!80;UBERON:0001474!3.81e-08!86;UBERON:0000945!4.77e-07!8;UBERON:0010039!4.77e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;9.17e-09;1!UBERON:0006518;9.17e-09;1!UBERON:0008949;9.17e-09;1!UBERON:0000101;9.17e-09;1!UBERON:0002167;9.17e-09;1!UBERON:0004177;7.40e-07;5!UBERON:0005057;7.40e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,1.03e-09,93;UBERON:0002390,4.06e-09,98;UBERON:0003061,4.06e-09,98;UBERON:0002171,9.91e-09,1;UBERON:0006518,9.91e-09,1;UBERON:0008949,9.91e-09,1;UBERON:0000101,9.91e-09,1;UBERON:0002167,9.91e-09,1;UBERON:0002371,1.74e-08,76;UBERON:0002193,4.33e-08,108;UBERON:0001474,9.35e-08,82;UBERON:0004765,6.21e-07,90 | |||
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| ||
|short_description=p@chr16:57397539..57397560,+ | |short_description=p@chr16:57397539..57397560,+ | ||
}} | }} |
Latest revision as of 10:32, 25 July 2015
Short description: | p@chr16:57397539..57397560, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:57397539..57397560, + |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 1.61e-55 | 8 |
dendritic cell | 2.96e-45 | 10 |
Langerhans cell | 1.01e-39 | 5 |
immature conventional dendritic cell | 8.11e-33 | 5 |
common dendritic progenitor | 8.11e-33 | 5 |
leukocyte | 2.18e-21 | 136 |
macrophage | 6.37e-21 | 6 |
hematopoietic oligopotent progenitor cell | 1.63e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.63e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 2.07e-17 | 120 |
hematopoietic stem cell | 1.23e-16 | 168 |
CD1a-positive Langerhans cell | 1.37e-16 | 2 |
immature CD1a-positive Langerhans cell | 1.37e-16 | 2 |
hematopoietic cell | 1.32e-15 | 177 |
nongranular leukocyte | 4.32e-14 | 115 |
lymphocyte of B lineage | 4.46e-11 | 24 |
pro-B cell | 4.46e-11 | 24 |
macrophage dendritic cell progenitor | 6.27e-11 | 61 |
granulocyte monocyte progenitor cell | 8.03e-10 | 67 |
myeloid cell | 8.28e-10 | 108 |
common myeloid progenitor | 8.28e-10 | 108 |
lymphoid lineage restricted progenitor cell | 2.16e-08 | 52 |
lymphocyte | 3.26e-08 | 53 |
common lymphoid progenitor | 3.26e-08 | 53 |
monopoietic cell | 3.10e-07 | 59 |
monocyte | 3.10e-07 | 59 |
monoblast | 3.10e-07 | 59 |
promonocyte | 3.10e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
immune system | 1.03e-09 | 93 |
hematopoietic system | 4.06e-09 | 98 |
blood island | 4.06e-09 | 98 |
lower lobe of right lung | 9.91e-09 | 1 |
right lung lobe | 9.91e-09 | 1 |
lower lobe of lung | 9.91e-09 | 1 |
lobe of lung | 9.91e-09 | 1 |
right lung | 9.91e-09 | 1 |
bone marrow | 1.74e-08 | 76 |
hemolymphoid system | 4.33e-08 | 108 |
bone element | 9.35e-08 | 82 |
skeletal element | 6.21e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.91e-09 | 1 |
monogenic disease | 4.91e-09 | 1 |
xeroderma pigmentosum | 4.91e-09 | 1 |
non-Hodgkin lymphoma | 6.22e-09 | 1 |
cutaneous T cell lymphoma | 6.22e-09 | 1 |
mycosis fungoides | 6.22e-09 | 1 |
lymphoma | 2.50e-07 | 10 |