FFCP PHASE1:Hg19::chr11:67412664..67412690,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:67412664..67412690,- | |||
|coexpression_cluster_id=C1642 | |||
|description=CAGE_peak_at_chr11:67412664..67412690,- | |description=CAGE_peak_at_chr11:67412664..67412690,- | ||
|id=chr11:67412664..67412690,- | |id=chr11:67412664..67412690,- | ||
|ontology_enrichment_celltype=CL:0000945!1.43e-28!24;CL:0000826!1.43e-28!24;CL:0000542!1.60e-22!53;CL:0000051!1.60e-22!53;CL:0002322!5.92e-21!5;CL:0000838!2.85e-20!52;CL:0000785!6.93e-10!2;CL:0000955!6.93e-10!2;CL:0000818!6.93e-10!2;CL:0000954!6.93e-10!2;CL:0000816!6.93e-10!2;CL:0002087!1.27e-08!119;CL:0000236!1.30e-07!14;CL:0000817!7.53e-07!3 | |ontology_enrichment_celltype=CL:0000945!1.43e-28!24;CL:0000826!1.43e-28!24;CL:0000542!1.60e-22!53;CL:0000051!1.60e-22!53;CL:0002322!5.92e-21!5;CL:0000838!2.85e-20!52;CL:0000785!6.93e-10!2;CL:0000955!6.93e-10!2;CL:0000818!6.93e-10!2;CL:0000954!6.93e-10!2;CL:0000816!6.93e-10!2;CL:0002087!1.27e-08!119;CL:0000236!1.30e-07!14;CL:0000817!7.53e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.68e-41;24!CL:0000542;4.46e-16;53!CL:0000785;1.04e-13;1!CL:0000819;1.04e-13;1!CL:0000039;6.75e-08;7!CL:0000586;6.75e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.17e-41,24;CL:0000826,5.17e-41,24;CL:0000542,3.46e-27,53;CL:0000051,3.46e-27,53;CL:0000838,8.46e-23,52;CL:0000819,9.73e-14,1;CL:0002087,1.06e-11,115;CL:0000738,1.08e-09,136;CL:0002031,4.07e-09,120;CL:0002032,5.68e-08,161;CL:0000837,5.68e-08,161;CL:0000039,7.50e-08,7;CL:0000586,7.50e-08,7;CL:0000037,1.40e-07,168;CL:0000785,1.64e-07,2;CL:0000955,1.64e-07,2;CL:0000818,1.64e-07,2;CL:0000954,1.64e-07,2;CL:0000816,1.64e-07,2;CL:0000988,4.01e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;4.46e-16;53!UBERON:0001045;1.61e-13;1!CL:0000954;1.70e-07;2 | |||
|ontology_enrichment_disease=DOID:0060058!2.81e-15!10 | |ontology_enrichment_disease=DOID:0060058!2.81e-15!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;2.68e-20;10!DOID:12603;3.28e-14;1!DOID:630;6.24e-14;1!DOID:0050177;6.24e-14;1!DOID:0050427;6.24e-14;1!DOID:0060073;1.04e-13;1!DOID:8675;1.04e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.42e-20,10;DOID:12603,3.08e-14,1;DOID:630,5.85e-14,1;DOID:0050177,5.85e-14,1;DOID:0050427,5.85e-14,1;DOID:0060073,9.73e-14,1;DOID:8675,9.73e-14,1;DOID:2531,1.49e-08,51;DOID:0060083,1.49e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.40e-09!7;UBERON:0005409!1.01e-07!35 | |ontology_enrichment_uberon=UBERON:0004177!2.40e-09!7;UBERON:0005409!1.01e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.04e-13;1!UBERON:0001961;1.04e-13;1!UBERON:0001744;1.04e-13;1!UBERON:0001042;1.04e-13;1!UBERON:0001735;1.04e-13;1!UBERON:0001154;1.61e-13;1!UBERON:0001153;1.61e-13;1!UBERON:0009854;1.61e-13;1!UBERON:0006562;1.70e-07;2!UBERON:0000473;5.14e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.10e-13,1;UBERON:0001961,1.10e-13,1;UBERON:0001744,1.10e-13,1;UBERON:0001735,1.10e-13,1;UBERON:0001154,1.42e-13,1;UBERON:0001153,1.42e-13,1;UBERON:0001045,1.42e-13,1;UBERON:0000473,5.63e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42535180810454,4.26923065139718,3.69940672174292,0,0,0,0,0,0,16.1131777207027,1.84820002233648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,1.28019066769952,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.265059536642971,0.813357600086629,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3506794110632,0,0.0711418433484141,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42707567183837,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269272933229316,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91927662745066,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,13.6407710186603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,1.06886962106224,0,1.25353769646188,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,2.49202596153974,0,0,0,0,0,0,0,0,0,0,0.402547587182052,4.80852738454849 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42535180810454,4.26923065139718,3.69940672174292,0,0,0,0,0,0,16.1131777207027,1.84820002233648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,1.28019066769952,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.265059536642971,0.813357600086629,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3506794110632,0,0.0711418433484141,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.42707567183837,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269272933229316,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91927662745066,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,13.6407710186603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.806637912890455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,1.06886962106224,0,1.25353769646188,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,2.49202596153974,0,0,0,0,0,0,0,0,0,0,0.402547587182052,4.80852738454849 | ||
|short_description=p@chr11:67412664..67412690,- | |short_description=p@chr11:67412664..67412690,- | ||
}} | }} |
Latest revision as of 19:08, 19 September 2015
Short description: | p@chr11:67412664..67412690, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:67412664..67412690, - |
Coexpression cluster: | C1642_Burkitt_acute_lymphoma_diffuse_xeroderma_chronic_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.17e-41 | 24 |
pro-B cell | 5.17e-41 | 24 |
lymphocyte | 3.46e-27 | 53 |
common lymphoid progenitor | 3.46e-27 | 53 |
lymphoid lineage restricted progenitor cell | 8.46e-23 | 52 |
B-1 B cell | 9.73e-14 | 1 |
nongranular leukocyte | 1.06e-11 | 115 |
leukocyte | 1.08e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 4.07e-09 | 120 |
hematopoietic oligopotent progenitor cell | 5.68e-08 | 161 |
hematopoietic multipotent progenitor cell | 5.68e-08 | 161 |
germ line cell | 7.50e-08 | 7 |
germ cell | 7.50e-08 | 7 |
hematopoietic stem cell | 1.40e-07 | 168 |
mature B cell | 1.64e-07 | 2 |
pre-B-II cell | 1.64e-07 | 2 |
transitional stage B cell | 1.64e-07 | 2 |
small pre-B-II cell | 1.64e-07 | 2 |
immature B cell | 1.64e-07 | 2 |
hematopoietic cell | 4.01e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
tonsil | 1.10e-13 | 1 |
mucosa-associated lymphoid tissue | 1.10e-13 | 1 |
lymphoid tissue | 1.10e-13 | 1 |
tonsillar ring | 1.10e-13 | 1 |
vermiform appendix | 1.42e-13 | 1 |
caecum | 1.42e-13 | 1 |
midgut | 1.42e-13 | 1 |
testis | 5.63e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.42e-20 | 10 |
acute leukemia | 3.08e-14 | 1 |
genetic disease | 5.85e-14 | 1 |
monogenic disease | 5.85e-14 | 1 |
xeroderma pigmentosum | 5.85e-14 | 1 |
lymphatic system cancer | 9.73e-14 | 1 |
lymphosarcoma | 9.73e-14 | 1 |
hematologic cancer | 1.49e-08 | 51 |
immune system cancer | 1.49e-08 | 51 |