FFCP PHASE1:Mm9::chr9:121207894..121207918,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:121207894..121207918,+ | |||
|description=CAGE_peak_at_chr9:121207894..121207918,+ | |description=CAGE_peak_at_chr9:121207894..121207918,+ | ||
|id=chr9:121207894..121207918,+ | |id=chr9:121207894..121207918,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.93e-10!9;CL:0002251!2.93e-10!9;CL:0000239!9.53e-10!6;CL:0000677!9.53e-10!6;CL:0000212!9.53e-10!6;CL:0000584!9.53e-10!6;CL:0000075!3.55e-08!7 | |ontology_enrichment_celltype=CL:0002563!2.93e-10!9;CL:0002251!2.93e-10!9;CL:0000239!9.53e-10!6;CL:0000677!9.53e-10!6;CL:0000212!9.53e-10!6;CL:0000584!9.53e-10!6;CL:0000075!3.55e-08!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,5.14e-15,3;CL:0000239,1.21e-13,6;CL:0000677,1.21e-13,6;CL:0000584,1.21e-13,6;CL:0000075,1.02e-11,7;CL:0002563,3.86e-09,9;CL:0002251,3.86e-09,9;CL:0000066,6.21e-09,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.27e-17!15;UBERON:0000160!2.28e-15!43;UBERON:0001242!2.75e-15!13;UBERON:0000060!2.75e-15!13;UBERON:0001262!2.75e-15!13;UBERON:0004786!2.75e-15!13;UBERON:0005409!3.74e-11!59;UBERON:0004923!1.04e-10!24;UBERON:0003350!2.93e-10!9;UBERON:0004808!2.93e-10!9;UBERON:0001277!2.93e-10!9;UBERON:0001007!4.64e-09!128;UBERON:0001555!4.64e-09!128;UBERON:0007026!4.64e-09!128;UBERON:0004119!9.54e-09!130;UBERON:0000925!9.54e-09!130;UBERON:0006595!9.54e-09!130;UBERON:0000485!4.88e-08!11;UBERON:0004921!6.30e-08!126;UBERON:0004185!6.30e-08!126 | |ontology_enrichment_uberon=UBERON:0000344!1.27e-17!15;UBERON:0000160!2.28e-15!43;UBERON:0001242!2.75e-15!13;UBERON:0000060!2.75e-15!13;UBERON:0001262!2.75e-15!13;UBERON:0004786!2.75e-15!13;UBERON:0005409!3.74e-11!59;UBERON:0004923!1.04e-10!24;UBERON:0003350!2.93e-10!9;UBERON:0004808!2.93e-10!9;UBERON:0001277!2.93e-10!9;UBERON:0001007!4.64e-09!128;UBERON:0001555!4.64e-09!128;UBERON:0007026!4.64e-09!128;UBERON:0004119!9.54e-09!130;UBERON:0000925!9.54e-09!130;UBERON:0006595!9.54e-09!130;UBERON:0000485!4.88e-08!11;UBERON:0004921!6.30e-08!126;UBERON:0004185!6.30e-08!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.80e-32,31;UBERON:0005409,3.42e-23,47;UBERON:0001242,1.67e-17,13;UBERON:0001262,1.67e-17,13;UBERON:0004786,1.67e-17,13;UBERON:0000344,4.47e-15,15;UBERON:0002108,1.22e-10,4;UBERON:0001155,4.22e-10,2;UBERON:0000059,4.22e-10,2;UBERON:0004923,3.83e-09,24;UBERON:0003350,3.86e-09,9;UBERON:0004808,3.86e-09,9;UBERON:0001277,3.86e-09,9;UBERON:0004921,4.05e-08,114;UBERON:0001007,6.19e-08,116;UBERON:0001555,6.19e-08,116;UBERON:0007026,6.19e-08,116;UBERON:0004119,9.34e-08,118;UBERON:0000925,9.34e-08,118;UBERON:0006595,9.34e-08,118;UBERON:0000485,1.71e-07,11;UBERON:0000331,8.97e-07,3;UBERON:0002116,8.97e-07,3;UBERON:0001204,8.97e-07,3;UBERON:0001168,8.97e-07,3 | |||
|phase1_expression=0,11.1672130444596,7.27998783023258,22.0798874253986,28.0501608769954,0.839396359559449,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0.473193248037357,0.411343300817216,0.42438965179803,0,0.0992909512008853,0,0.799962113967033,0.45881856213434,5.7423196411502,6.8921919385452,3.878482188346,1.14014051673824,1.76421090831952,0.443461021310609,0,0,0,0.288851619751275,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,3.0654846625031,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.56748166682099,0.146199987425332,0.439100230582101,0,0,0,8.26046957459495,11.6358249331959,0,0,0,0.201683524623343,0,0,3.32170343081158,0.164698954724011,0,0,0.19496408711912,2.69645822596266,1.08069024937347,1.59313018603494,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0.136694227721025,0,0,0,0.276399947608848,0,0,0,0,0,0,0,0,0,2.33306951925227,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0.389762468933385,0.537080087002444,0.39736270956253,0.240390899039938,0.147689527174577,0.100966449948148,0.457240839929999,0.201652370273681,0,0.192423683280659,0.233753804363138,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,11.1672130444596,7.27998783023258,22.0798874253986,28.0501608769954,0.839396359559449,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0.473193248037357,0.411343300817216,0.42438965179803,0,0.0992909512008853,0,0.799962113967033,0.45881856213434,5.7423196411502,6.8921919385452,3.878482188346,1.14014051673824,1.76421090831952,0.443461021310609,0,0,0,0.288851619751275,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,3.0654846625031,0,0.599902730993408,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0.56748166682099,0.146199987425332,0.439100230582101,0,0,0,8.26046957459495,11.6358249331959,0,0,0,0.201683524623343,0,0,3.32170343081158,0.164698954724011,0,0,0.19496408711912,2.69645822596266,1.08069024937347,1.59313018603494,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.91480836629851,0,0,0,0,0,0.136694227721025,0,0,0,0.276399947608848,0,0,0,0,0,0,0,0,0,2.33306951925227,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0.102710957164827,0.389762468933385,0.537080087002444,0.39736270956253,0.240390899039938,0.147689527174577,0.100966449948148,0.457240839929999,0.201652370273681,0,0.192423683280659,0.233753804363138,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:121207894..121207918,+ | |short_description=p@chr9:121207894..121207918,+ | ||
}} | }} |
Latest revision as of 18:15, 4 August 2015
Short description: | p@chr9:121207894..121207918, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:121207894..121207918, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 5.14e-15 | 3 |
brush border epithelial cell | 1.21e-13 | 6 |
gut absorptive cell | 1.21e-13 | 6 |
enterocyte | 1.21e-13 | 6 |
columnar/cuboidal epithelial cell | 1.02e-11 | 7 |
intestinal epithelial cell | 3.86e-09 | 9 |
epithelial cell of alimentary canal | 3.86e-09 | 9 |
epithelial cell | 6.21e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.80e-32 | 31 |
gastrointestinal system | 3.42e-23 | 47 |
intestinal mucosa | 1.67e-17 | 13 |
wall of intestine | 1.67e-17 | 13 |
gastrointestinal system mucosa | 1.67e-17 | 13 |
mucosa | 4.47e-15 | 15 |
small intestine | 1.22e-10 | 4 |
colon | 4.22e-10 | 2 |
large intestine | 4.22e-10 | 2 |
organ component layer | 3.83e-09 | 24 |
epithelium of mucosa | 3.86e-09 | 9 |
gastrointestinal system epithelium | 3.86e-09 | 9 |
intestinal epithelium | 3.86e-09 | 9 |
subdivision of digestive tract | 4.05e-08 | 114 |
digestive system | 6.19e-08 | 116 |
digestive tract | 6.19e-08 | 116 |
primitive gut | 6.19e-08 | 116 |
endoderm-derived structure | 9.34e-08 | 118 |
endoderm | 9.34e-08 | 118 |
presumptive endoderm | 9.34e-08 | 118 |
simple columnar epithelium | 1.71e-07 | 11 |
ileal mucosa | 8.97e-07 | 3 |
ileum | 8.97e-07 | 3 |
mucosa of small intestine | 8.97e-07 | 3 |
wall of small intestine | 8.97e-07 | 3 |