FFCP PHASE1:Hg19::chr12:19650285..19650289,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:19650285..19650289,+ | |||
|description=CAGE_peak_at_chr12:19650285..19650289,+ | |description=CAGE_peak_at_chr12:19650285..19650289,+ | ||
|id=chr12:19650285..19650289,+ | |id=chr12:19650285..19650289,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;7.54e-13;7!CL:0000586;7.54e-13;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.88e-13,7;CL:0000586,8.88e-13,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.03e-09;10!UBERON:0005564;5.03e-09;10!UBERON:0004874;9.47e-07;1 | |||
|ontology_enrichment_disease=DOID:3095!6.80e-07!22;DOID:2994!6.80e-07!22 | |ontology_enrichment_disease=DOID:3095!6.80e-07!22;DOID:2994!6.80e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;7.33e-15;22!DOID:2994;7.33e-15;22!DOID:1799;2.94e-07;1!DOID:10165;2.94e-07;1!DOID:1798;2.94e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.42e-15,22;DOID:2994,7.42e-15,22;DOID:1799,2.95e-07,1;DOID:10165,2.95e-07,1;DOID:1798,2.95e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003135;2.38e-12;11!UBERON:0000473;2.94e-11;8!UBERON:0002050;7.45e-11;5!UBERON:0005423;7.45e-11;5!UBERON:0000922;6.62e-09;49!UBERON:0005795;3.40e-07;1!UBERON:0002038;9.47e-07;1!UBERON:0000989;9.47e-07;1!UBERON:0008811;9.47e-07;1!UBERON:0009661;9.47e-07;1!UBERON:0002950;9.47e-07;1!UBERON:0001891;9.47e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,2.26e-12,11;UBERON:0000473,4.20e-11,8;UBERON:0000989,3.95e-07,1;UBERON:0008811,3.95e-07,1;UBERON:0006258,3.95e-07,1;UBERON:0005876,3.95e-07,1;UBERON:0004874,3.95e-07,1 | |||
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| ||
|short_description=p@chr12:19650285..19650289,+ | |short_description=p@chr12:19650285..19650289,+ | ||
}} | }} |
Latest revision as of 07:24, 24 July 2015
Short description: | p@chr12:19650285..19650289, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:19650285..19650289, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.88e-13 | 7 |
germ cell | 8.88e-13 | 7 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.26e-12 | 11 |
testis | 4.20e-11 | 8 |
penis | 3.95e-07 | 1 |
intromittent organ | 3.95e-07 | 1 |
lateral plate mesenchyme | 3.95e-07 | 1 |
undifferentiated genital tubercle | 3.95e-07 | 1 |
somatopleure | 3.95e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.42e-15 | 22 |
germ cell cancer | 7.42e-15 | 22 |
islet cell tumor | 2.95e-07 | 1 |
endocrine pancreas cancer | 2.95e-07 | 1 |
pancreatic endocrine carcinoma | 2.95e-07 | 1 |