FFCP PHASE1:Hg19::chr12:4378971..4378986,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:4378971..4378986,+ | |||
|coexpression_cluster_id=C2205 | |||
|description=CAGE_peak_at_chr12:4378971..4378986,+ | |description=CAGE_peak_at_chr12:4378971..4378986,+ | ||
|id=chr12:4378971..4378986,+ | |id=chr12:4378971..4378986,+ | ||
|ontology_enrichment_celltype=CL:0000738!8.75e-37!140;CL:0002087!4.80e-33!119;CL:0002031!5.53e-33!124;CL:0000037!1.30e-30!172;CL:0000566!1.30e-30!172;CL:0000988!1.42e-30!182;CL:0002032!1.02e-26!165;CL:0000837!1.02e-26!165;CL:0000838!7.66e-25!52;CL:0000542!4.41e-24!53;CL:0000051!4.41e-24!53;CL:0000791!4.87e-15!18;CL:0000789!4.87e-15!18;CL:0002420!4.87e-15!18;CL:0002419!4.87e-15!18;CL:0000790!4.87e-15!18;CL:0000084!1.19e-13!25;CL:0000827!1.19e-13!25;CL:0002057!1.30e-12!42;CL:0000860!3.68e-11!45;CL:0000557!5.83e-11!71;CL:0000766!1.09e-10!76;CL:0002009!6.15e-10!65;CL:0000839!1.02e-09!70;CL:0000945!1.59e-09!24;CL:0000826!1.59e-09!24;CL:0000625!4.94e-09!11;CL:0002194!5.24e-09!63;CL:0000576!5.24e-09!63;CL:0000040!5.24e-09!63;CL:0000559!5.24e-09!63;CL:0000080!4.29e-08!6;CL:0000763!5.93e-08!112;CL:0000049!5.93e-08!112 | |ontology_enrichment_celltype=CL:0000738!8.75e-37!140;CL:0002087!4.80e-33!119;CL:0002031!5.53e-33!124;CL:0000037!1.30e-30!172;CL:0000566!1.30e-30!172;CL:0000988!1.42e-30!182;CL:0002032!1.02e-26!165;CL:0000837!1.02e-26!165;CL:0000838!7.66e-25!52;CL:0000542!4.41e-24!53;CL:0000051!4.41e-24!53;CL:0000791!4.87e-15!18;CL:0000789!4.87e-15!18;CL:0002420!4.87e-15!18;CL:0002419!4.87e-15!18;CL:0000790!4.87e-15!18;CL:0000084!1.19e-13!25;CL:0000827!1.19e-13!25;CL:0002057!1.30e-12!42;CL:0000860!3.68e-11!45;CL:0000557!5.83e-11!71;CL:0000766!1.09e-10!76;CL:0002009!6.15e-10!65;CL:0000839!1.02e-09!70;CL:0000945!1.59e-09!24;CL:0000826!1.59e-09!24;CL:0000625!4.94e-09!11;CL:0002194!5.24e-09!63;CL:0000576!5.24e-09!63;CL:0000040!5.24e-09!63;CL:0000559!5.24e-09!63;CL:0000080!4.29e-08!6;CL:0000763!5.93e-08!112;CL:0000049!5.93e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.07e-16;53!CL:0000791;4.90e-14;18!CL:0000789;4.90e-14;18!CL:0002419;4.90e-14;18!CL:0000084;2.03e-13;25!CL:0002087;2.69e-11;104!CL:0000945;6.60e-10;24!CL:0000623;4.15e-09;3!CL:0000860;1.93e-08;33!CL:0002057;1.93e-08;33!CL:0000767;2.27e-08;3!CL:0000226;6.63e-08;3!CL:0000842;6.63e-08;3!CL:0000625;1.11e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.88e-30,136;CL:0002087,7.87e-28,115;CL:0000988,1.16e-27,177;CL:0000838,3.97e-27,52;CL:0000542,1.83e-26,53;CL:0000051,1.83e-26,53;CL:0000037,1.54e-25,168;CL:0002031,4.11e-23,120;CL:0002032,7.19e-20,161;CL:0000837,7.19e-20,161;CL:0000791,3.35e-14,18;CL:0000789,3.35e-14,18;CL:0002420,3.35e-14,18;CL:0002419,3.35e-14,18;CL:0000790,3.35e-14,18;CL:0000084,1.88e-13,25;CL:0000827,1.88e-13,25;CL:0000945,7.09e-10,24;CL:0000826,7.09e-10,24;CL:0000623,4.18e-09,3;CL:0000825,4.18e-09,3;CL:0000767,2.15e-08,3;CL:0000226,4.34e-08,3;CL:0000842,4.34e-08,3;CL:0000625,9.86e-08,11;CL:0000860,4.14e-07,42;CL:0002057,4.14e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000051;2.07e-16;53!CL:0000790;4.90e-14;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.90e-20!102;UBERON:0003061!2.90e-20!102;UBERON:0002193!7.66e-20!112;UBERON:0002371!6.79e-10!80;UBERON:0000178!4.27e-09!15;UBERON:0000179!4.27e-09!15;UBERON:0000463!4.27e-09!15;UBERON:0002405!5.12e-09!115;UBERON:0001474!2.05e-08!86;UBERON:0004177!2.82e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.04e-11;15!UBERON:0000179;1.04e-11;15!UBERON:0000463;1.04e-11;15!UBERON:0002390;7.38e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.83e-13,98;UBERON:0003061,9.83e-13,98;UBERON:0000178,1.16e-11,15;UBERON:0000179,1.16e-11,15;UBERON:0000463,1.16e-11,15;UBERON:0002193,7.23e-11,108;UBERON:0002370,1.05e-09,4;UBERON:0005058,1.05e-09,4;UBERON:0009113,1.05e-09,4;UBERON:0003295,1.05e-09,4;UBERON:0005562,1.05e-09,4;UBERON:0004177,2.63e-08,7;UBERON:0005057,2.63e-08,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,6.265899271332,4.26923065139718,5.90330859852594,4.72037132218685,3.45446458287491,3.40595471295367,0,0,0,0,0,1.17440175733939,0,4.21143339687298,0.868043482863407,0,0,0,0.145398238779565,0.377875943688809,0,0,1.23350366406548,1.54853185447552,0.28769239232215,1.0246428261164,0.945928919554341,1.37898272294647,0,0,0.752969358170419,1.09162460023138,0.898893937780338,1.53041946185451,1.28371610830437,0,0,0.199463657621632,0.426224750532694,0,1.70215567407342,0.622822248995575,1.00499466102697,2.08593167368081,3.04064382587163,1.81619850790011,0.368277635987565,0.316462387440884,0.633765858935825,0.637812899895131,0,1.01095768031846,0,0.48217676009124,0,0,0,0,0,2.66852776159066,0,0,1.14950487990897,0.661044872784862,0.954053754535364,1.1384259382189,4.11066032559657,1.14681968437569,1.32171328579026,2.24203425192614,0.790152254325231,0.590129310341499,1.57204305099666,1.23360899399706,6.35308682484577,0.651844533267181,0.946895611469467,0,2.89667187901451,1.47302953737419,0.443067789167242,1.62482318259009,5.76410938765538,5.33243324995501,1.64437904603676,2.21080014228679,1.73881851441031,1.03800594213442,0,0,2.37949619664889,4.21542542962113,1.71813722741315,1.26509846009751,0.318565414324097,0.651083453856419,2.85135613334512,0.451725357233318,1.4078527226986,0,0.947109008176067,2.46338399076314,6.24980903996671,9.36040685242276,5.93780055919476,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0.649094787309367,0.174129737299267,0.398873881556595,0.476981248610684,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0.760272105718513,3.1728067481262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,2.86804595389004,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.740707561268237,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0.93733833986777,0,0,0,0,0,0.985326475791887,0,0.621984346622316,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0.871533458600294,0,0,0,0,0,0,0,0,0,0,3.47463946379935,13.2010609335291,16.1720681144638,14.1177339907723,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,2.37285620900479,5.97674323699288,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20303882181971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0.638063562472921,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,0,0,0,0.764637207142375,1.13929437434833,0.476463550915578,0.411362273086194,0,1.08006287447623,0,0.640944426764839,0,0,0,0,0,0,0.199579371432817,0,1.69338866179106,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0.540911356951966,2.99764771198038,0,0,0.439524537815682,0,1.00299045849731,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0,1.10513566212459,0,0,2.8309505256046,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,11.5643240185443,7.53740027573667,8.77144375845825,0,0,0,8.21046551470497,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0.279282401272254,0.229160424011684,0.717873024576814,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0.254019996197353,0,0,0.160753148465019,0.275078873194468,0,0.2249738915515,1.5476039091159,0.0607495566580247,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.39669780522807,0,0,0,0,0,0.496166021811951,1.97611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,3.597064508342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,12.7991933347155,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.177404740325278,0.806637912890455,0,0,0.0657727735628491,0,0,0.156986185701028,0,0,0.913158720509496,0,0,0.214429632529969,1.42212250559454,0,0.173858272302579,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0.549702583727146,0,0.154348316215889,0.437119121007915,0,0,0,0,0,0,0,0.0939839179798536,0.644578879735772,2.39858774219829,0,1.05868461514708,0,0,0,0,0,0,0,0,0,0,0,0,0,40.7969173256827,0,0.534434810531121,0.918948995348449,4.011320628678,0,0,0,0,0,0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| ||
|short_description=p@chr12:4378971..4378986,+ | |short_description=p@chr12:4378971..4378986,+ | ||
}} | }} |
Latest revision as of 08:29, 24 July 2015
Short description: | p@chr12:4378971..4378986, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:4378971..4378986, + |
Coexpression cluster: | C2205_teratocarcinoma_Natural_CD8_mycosis_cord_diffuse_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.88e-30 | 136 |
nongranular leukocyte | 7.87e-28 | 115 |
hematopoietic cell | 1.16e-27 | 177 |
lymphoid lineage restricted progenitor cell | 3.97e-27 | 52 |
lymphocyte | 1.83e-26 | 53 |
common lymphoid progenitor | 1.83e-26 | 53 |
hematopoietic stem cell | 1.54e-25 | 168 |
hematopoietic lineage restricted progenitor cell | 4.11e-23 | 120 |
hematopoietic oligopotent progenitor cell | 7.19e-20 | 161 |
hematopoietic multipotent progenitor cell | 7.19e-20 | 161 |
mature alpha-beta T cell | 3.35e-14 | 18 |
alpha-beta T cell | 3.35e-14 | 18 |
immature T cell | 3.35e-14 | 18 |
mature T cell | 3.35e-14 | 18 |
immature alpha-beta T cell | 3.35e-14 | 18 |
T cell | 1.88e-13 | 25 |
pro-T cell | 1.88e-13 | 25 |
lymphocyte of B lineage | 7.09e-10 | 24 |
pro-B cell | 7.09e-10 | 24 |
natural killer cell | 4.18e-09 | 3 |
pro-NK cell | 4.18e-09 | 3 |
basophil | 2.15e-08 | 3 |
single nucleate cell | 4.34e-08 | 3 |
mononuclear cell | 4.34e-08 | 3 |
CD8-positive, alpha-beta T cell | 9.86e-08 | 11 |
classical monocyte | 4.14e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.14e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.83e-13 | 98 |
blood island | 9.83e-13 | 98 |
blood | 1.16e-11 | 15 |
haemolymphatic fluid | 1.16e-11 | 15 |
organism substance | 1.16e-11 | 15 |
hemolymphoid system | 7.23e-11 | 108 |
thymus | 1.05e-09 | 4 |
hemolymphoid system gland | 1.05e-09 | 4 |
thymic region | 1.05e-09 | 4 |
pharyngeal gland | 1.05e-09 | 4 |
thymus primordium | 1.05e-09 | 4 |
hemopoietic organ | 2.63e-08 | 7 |
immune organ | 2.63e-08 | 7 |