FFCP PHASE1:Hg19::chr17:79990035..79990049,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:79990035..79990049,+ | |||
|coexpression_cluster_id=C3701 | |||
|description=CAGE_peak_at_chr17:79990035..79990049,+ | |description=CAGE_peak_at_chr17:79990035..79990049,+ | ||
|id=chr17:79990035..79990049,+ | |id=chr17:79990035..79990049,+ | ||
|ontology_enrichment_celltype=CL:0000066!4.73e-14!254;CL:0002076!6.98e-12!43;CL:0000223!7.96e-09!59;CL:0002321!1.12e-08!248;CL:0002368!3.59e-08!13;CL:0000220!6.34e-08!246;CL:0002322!6.43e-07!5 | |ontology_enrichment_celltype=CL:0000066!4.73e-14!254;CL:0002076!6.98e-12!43;CL:0000223!7.96e-09!59;CL:0002321!1.12e-08!248;CL:0002368!3.59e-08!13;CL:0000220!6.34e-08!246;CL:0002322!6.43e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;4.08e-17;5!CL:0002328;3.95e-10;3!CL:0000240;9.34e-09;6!CL:0000311;9.34e-09;6!CL:0000079;9.34e-09;6!CL:0000237;9.34e-09;6!CL:0002159;1.27e-07;14!CL:0002321;1.66e-07;15!CL:0000575;1.74e-07;2!CL:0002076;2.84e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.47e-17,5;CL:0002328,2.40e-10,3;CL:0000240,1.23e-08,6;CL:0000311,1.23e-08,6;CL:0000079,1.23e-08,6;CL:0000237,1.23e-08,6;CL:0000036,1.23e-08,6;CL:0000357,1.23e-08,6;CL:0000114,1.23e-08,6;CL:0002076,1.33e-07,42;CL:0002159,1.39e-07,14;CL:0000575,1.41e-07,2;CL:0000066,3.21e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000357;9.34e-09;6!CL:0000114;9.34e-09;6 | |||
|ontology_enrichment_disease=DOID:1036!5.45e-07!8;DOID:1749!7.16e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1036;7.38e-11;8!DOID:8692;4.42e-09;31!DOID:1240;2.50e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,7.72e-11,8;DOID:8692,5.17e-09,31;DOID:1240,3.65e-08,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000485;9.03e-12;7!UBERON:0004815;3.95e-10;3!UBERON:0002031;3.95e-10;3!UBERON:0000964;8.93e-08;4!UBERON:0010409;8.93e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.40e-10,3;UBERON:0002031,2.40e-10,3;UBERON:0000485,3.39e-09,9;UBERON:0000964,1.05e-07,4;UBERON:0010409,1.05e-07,4;UBERON:0004348,1.05e-07,4;UBERON:0005427,1.05e-07,4 | |||
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| 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| ||
|short_description=p@chr17:79990035..79990049,+ | |short_description=p@chr17:79990035..79990049,+ | ||
}} | }} |
Latest revision as of 22:58, 25 July 2015
Short description: | p@chr17:79990035..79990049, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:79990035..79990049, + |
Coexpression cluster: | C3701_iPS_oral_HES3GFP_Alveolar_leiomyoblastoma_rhabdomyosarcoma_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.47e-17 | 5 |
bronchial epithelial cell | 2.40e-10 | 3 |
stratified squamous epithelial cell | 1.23e-08 | 6 |
keratin accumulating cell | 1.23e-08 | 6 |
stratified epithelial cell | 1.23e-08 | 6 |
keratinizing barrier epithelial cell | 1.23e-08 | 6 |
epithelial fate stem cell | 1.23e-08 | 6 |
stratified epithelial stem cell | 1.23e-08 | 6 |
surface ectodermal cell | 1.23e-08 | 6 |
endo-epithelial cell | 1.33e-07 | 42 |
general ecto-epithelial cell | 1.39e-07 | 14 |
corneal epithelial cell | 1.41e-07 | 2 |
epithelial cell | 3.21e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.40e-10 | 3 |
epithelium of bronchus | 2.40e-10 | 3 |
simple columnar epithelium | 3.39e-09 | 9 |
cornea | 1.05e-07 | 4 |
eye surface | 1.05e-07 | 4 |
optic eminence | 1.05e-07 | 4 |
corneal primordium | 1.05e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 7.72e-11 | 8 |
myeloid leukemia | 5.17e-09 | 31 |
leukemia | 3.65e-08 | 39 |