FFCP PHASE1:Hg19::chr11:114430570..114430581,-: Difference between revisions
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|id=chr11:114430570..114430581,-
|short_description=p2@FAM55A
|description=CAGE_peak_2_at_FAM55A_5end
|association_with_transcript=0bp_to_ENST00000251921,NM_152315,...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=120400 | |EntrezGene=120400 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28527 | |HGNC=28527 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N323 | |UniProt=Q8N323 | ||
|association_with_transcript=0bp_to_ENST00000251921,NM_152315,uc001ppa.2_5end | |||
|cluster_id=chr11:114430570..114430581,- | |||
|coexpression_cluster_id=C201 | |||
|description=CAGE_peak_2_at_FAM55A_5end | |||
|id=chr11:114430570..114430581,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.30e-40;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!9.93e-44!11;UBERON:0000160!5.94e-30!27;UBERON:0004907!1.02e-24!5;UBERON:0001155!2.16e-24!9;UBERON:0005409!3.72e-23!35;UBERON:0001154!8.17e-15!1;UBERON:0001153!8.17e-15!1;UBERON:0001052!2.26e-14!4;UBERON:0001046!1.66e-11!19;UBERON:0004921!2.18e-07!129;UBERON:0004185!2.18e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000059;1.93e-89;11!UBERON:0001155;2.58e-70;9!UBERON:0000160;4.53e-55;17!UBERON:0005409;2.60e-43;22!UBERON:0001154;3.30e-40;1!UBERON:0001153;3.30e-40;1!UBERON:0009854;3.30e-40;1!UBERON:0004907;2.74e-32;5!UBERON:0004921;6.43e-30;33!UBERON:0001007;7.98e-12;81!UBERON:0001555;8.24e-12;54!UBERON:0001052;3.42e-11;4!UBERON:0009856;3.79e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,1.93e-89,11;UBERON:0001155,2.58e-70,9;UBERON:0000160,4.53e-55,17;UBERON:0001154,3.30e-40,1;UBERON:0001153,3.30e-40,1;UBERON:0001045,3.30e-40,1;UBERON:0005409,2.01e-38,25;UBERON:0004907,2.74e-32,5;UBERON:0001052,3.42e-11,4;UBERON:0001046,2.56e-09,19;UBERON:0004921,6.01e-09,118;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
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|short_description=p2@FAM55A | |||
}} | }} |
Latest revision as of 07:30, 25 September 2015
Short description: | p2@FAM55A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM55A_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | 0bp_to_ENST00000251921, NM_152315, uc001ppa.2_5end |
EntrezGene: | FAM55A |
HGNC: | 28527 |
UniProt: | Q8N323 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
large intestine | 1.93e-89 | 11 |
colon | 2.58e-70 | 9 |
intestine | 4.53e-55 | 17 |
vermiform appendix | 3.30e-40 | 1 |
caecum | 3.30e-40 | 1 |
midgut | 3.30e-40 | 1 |
gastrointestinal system | 2.01e-38 | 25 |
lower digestive tract | 2.74e-32 | 5 |
rectum | 3.42e-11 | 4 |
hindgut | 2.56e-09 | 19 |
subdivision of digestive tract | 6.01e-09 | 118 |
digestive system | 2.16e-07 | 145 |
digestive tract | 2.16e-07 | 145 |
primitive gut | 2.16e-07 | 145 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |