FFCP PHASE1:Hg19::chr11:123325343..123325357,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:123325343..123325357,+
|short_description=p1@ENST00000525757,p1@uc001pyv.1
|description=CAGE_peak_1_at_ENST00000525757_5end,CAGE_peak_1_at_uc001pyv.1_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=237bp_to_ENST00000525757,uc001pyv.1_5end | |||
|cluster_id=chr11:123325343..123325357,+ | |||
|description=CAGE_peak_1_at_ENST00000525757_5end,CAGE_peak_1_at_uc001pyv.1_5end | |||
|id=chr11:123325343..123325357,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.11e-11!45;CL:0002057!2.75e-09!42;CL:0002009!1.67e-07!65;CL:0002539!2.96e-07!10;CL:0002194!3.24e-07!63;CL:0000576!3.24e-07!63;CL:0000040!3.24e-07!63;CL:0000559!3.24e-07!63;CL:0000557!7.44e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.58e-11;33!CL:0002057;1.58e-11;33!CL:0002539;3.86e-11;10!CL:0000473;1.20e-07;39!CL:0000234;1.20e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,3.72e-11,10;CL:0000860,1.22e-08,42;CL:0002057,1.22e-08,42;CL:0000473,3.88e-07,48;CL:0000234,3.88e-07,48 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.40e-10;29!CL:0002057;7.82e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.31e-08,106;DOID:0050687,5.88e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.71e-12!9;UBERON:0000926!8.61e-11!448;UBERON:0004120!8.61e-11!448;UBERON:0006603!8.61e-11!448;UBERON:0003081!1.20e-08!216;UBERON:0004573!7.74e-08!33;UBERON:0004571!7.74e-08!33;UBERON:0002075!1.50e-07!18;UBERON:0004872!2.22e-07!84;UBERON:0001557!2.65e-07!19;UBERON:0004237!2.96e-07!10;UBERON:0004695!2.96e-07!10;UBERON:0002111!2.96e-07!10;UBERON:0004178!2.96e-07!10;UBERON:0002204!4.83e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.13e-23;9!UBERON:0001557;4.13e-23;9!UBERON:0004237;3.86e-11;10!UBERON:0004695;3.86e-11;10!UBERON:0002111;3.86e-11;10!UBERON:0004178;3.86e-11;10!UBERON:0000072;2.12e-07;37!UBERON:0001135;4.88e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.94e-23,9;UBERON:0001557,7.90e-12,19;UBERON:0004237,3.72e-11,10;UBERON:0004695,3.72e-11,10;UBERON:0002111,3.72e-11,10;UBERON:0004178,3.72e-11,10;UBERON:0008947,2.21e-07,38;UBERON:0003258,2.21e-07,38;UBERON:0001135,4.76e-07,15;UBERON:0003081,6.20e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.05092631806598,4.21886169616784,5.84248072309899,5.85519358548608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.232429036905685,4.11167888021826,4.02618282163635,0.863077176966451,3.33008918487831,1.6553756092201,0.689491361473237,7.10033151942209,4.06279459783025,0.376484679085209,9.5517152520246,2.47195832889593,0.918251677112708,17.9720255162612,3.83602275479425,0.329851300186716,0.797854630486527,0,0,1.70215567407342,0,1.25624332628372,4.69334626578181,5.64690996233303,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0.221533894583621,0,0,0.390178042679635,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,31.9314284401775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,2.0078563452417,0.709336764396714,0.560677600142307,0,0.98667019366864,0,0.269421344139376,1.79808093424805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,1.02088964844019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201504196455281,2.37384829234683,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,21.2952240071719,24.781949441481,30.3673897653187,22.8308523556055,32.0282782815837,34.1669691519979,20.2246962240247,22.9579114196655,37.7052213807463,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.671928512795438,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,1.73737568001095,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0.431428401637234,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0,0,0,0,0,0.519254429183621,0.116210378459959,0,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,2.27466768141793,4.42243633718941,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0.165284915360978,0,0.765676274967505,0,0,5.66662224295152,6.2733354314454,0.308033580176089,0,10.4391959049009,1.29726953372744,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0.421258456238981,0,9.50482609562009,17.9605249486484,0,0,0,0.551365343546124,0.66343897524122,0.876901770507525,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0.192444225451024,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.334330152832435,0,0,0,0,0,0,0.111308705022906,1.6480387422676,0,0,0,0,0,0,0,0.0898683511473268,0.537063524026827,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,25.0570942674013,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0.341826167541004,0,0.179515288819544,0,0.31900115973192,0,0,0,2.04074333313532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86494757262552,0.626531697032732,0.269604531922708,0,0,0,0.782658475728359,6.7978506269546,0,0,0.30607276163049,0,0,0,6.64653872707185,38.0640749256824,15.6966459203613,9.55779438183671,0,0,0,0,1.48000651186684,0,0,24.0923264909822,17.7607040519431,22.0890579473133,0,0,0,5.75576083516354,2.78200456384186,0,15.2530078533146,2.80555870880368,0,0,0,0,0,123.02279748188,1.11827282008889,7.30651507312066,0,0,0,0,0,0,1.27746588066972,0,2.36598618851383,0,0,3.58936512288407,0.199679000498991,0,0.89268582976749,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,2.92466059016951,0,0,0,0,0.0524545881349981,0.105600336519406,145.222744859604,0,0,0,0,0,0,0,0,0.164185041498678,1.87426823963964,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72022758707021,0,0,0,0,0,5.70930667089935,0,0,0,0,0,0.554805861502613,0,0,0,2.51724075236616,0,0.15543720058278,8.2798883994195,0.796483835818512,0,0.776314784381297,1.65882483136342,0.53168342911599,0,0,0,0.813741466409323,0.181848659202559,0.322231671127465,0.928067519756987,0,0,0,0,0,0,0,0,0,0,0,0,2.16161013012681,0,0,0,0.675769762612291,0,0,0,0,0.389720617678777,0,0.327130788511688,0,0.245772908753719,0,2.59983614611409,0,0,0,5.52317850755522,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,1.22035527683273,0,0,0,0,0,0,0,0,0,0,0,0,4.1421595563606,0,0.0752103283492573,0.40341013740704,0,0,0.655087670040387,0,0,0,0,0,0,0,0,0,0,5.35701835878287,0,20.0298649398088,1.36597314810779,0.266107110487916,0,1.02892805662451,0,0,83.3266578231976,6.89634691730829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,6.64236511693364,0,0,0,0,0,0,0,0,0.339854229375634,0.0939839179798536,0.257831551894309,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.134704106029175,0.717222053926764,0,0.0814032686109745,0.747091421144008,0,0,0,0,0,0,0,0 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| ||
|short_description=p1@ENST00000525757,p1@uc001pyv.1 | |||
}} | }} |
Latest revision as of 19:24, 23 July 2015
Short description: | p1@ENST00000525757, p1@uc001pyv.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000525757_5end, CAGE_peak_1_at_uc001pyv.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 237bp_to_ENST00000525757, uc001pyv.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 3.72e-11 | 10 |
classical monocyte | 1.22e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.22e-08 | 42 |
defensive cell | 3.88e-07 | 48 |
phagocyte | 3.88e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.94e-23 | 9 |
upper respiratory tract | 7.90e-12 | 19 |
blood vessel smooth muscle | 3.72e-11 | 10 |
arterial system smooth muscle | 3.72e-11 | 10 |
artery smooth muscle tissue | 3.72e-11 | 10 |
aorta smooth muscle tissue | 3.72e-11 | 10 |
respiratory primordium | 2.21e-07 | 38 |
endoderm of foregut | 2.21e-07 | 38 |
smooth muscle tissue | 4.76e-07 | 15 |
lateral plate mesoderm | 6.20e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.31e-08 | 106 |
cell type cancer | 5.88e-07 | 143 |