FFCP PHASE1:Hg19::chr13:99405113..99405134,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6564 | |EntrezGene=6564 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10920 | |HGNC=10920 | ||
|TSSclassifier=strong | |||
|UniProt=B2CQT6,P46059 | |UniProt=B2CQT6,P46059 | ||
|association_with_transcript=-184bp_to_NM_005073,uc001vno.2_5end | |association_with_transcript=-184bp_to_NM_005073,uc001vno.2_5end | ||
|cluster_id=chr13:99405113..99405134,- | |||
|description=CAGE_peak_2_at_SLC15A1_5end | |description=CAGE_peak_2_at_SLC15A1_5end | ||
|id=chr13:99405113..99405134,- | |id=chr13:99405113..99405134,- | ||
|ontology_enrichment_celltype=CL:0002322!4.36e-14!5;CL:1000507!3.33e-11!12;CL:1000494!3.33e-11!12;CL:0000239!1.34e-09!3;CL:1000615!1.34e-09!3;CL:0002306!1.34e-09!3;CL:1000497!2.80e-09!18;CL:0002518!2.80e-09!18;CL:1000449!4.15e-08!16 | |ontology_enrichment_celltype=CL:0002322!4.36e-14!5;CL:1000507!3.33e-11!12;CL:1000494!3.33e-11!12;CL:0000239!1.34e-09!3;CL:1000615!1.34e-09!3;CL:0002306!1.34e-09!3;CL:1000497!2.80e-09!18;CL:0002518!2.80e-09!18;CL:1000449!4.15e-08!16 | ||
|ontology_enrichment_celltype_v019=CL:0000313;1.65e-16;1!CL:1000497;1.37e-14;17!CL:0002518;1.37e-14;17!CL:1000507;2.79e-14;10!CL:1000494;2.79e-14;10!CL:1000449;1.01e-09;15!CL:0000159;6.42e-09;2!CL:0002535;6.42e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,3.07e-16,1;CL:1000497,1.19e-14,17;CL:0002518,1.19e-14,17;CL:1000507,2.44e-14,10;CL:1000494,2.44e-14,10;CL:1000449,9.19e-10,15;CL:0002535,8.09e-09,2;CL:0000159,8.74e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.65e-16;1!UBERON:0009117;4.26e-07;10!UBERON:0005564;4.26e-07;10 | |||
|ontology_enrichment_disease=DOID:299!9.53e-10!25;DOID:305!8.69e-09!106;DOID:4929!2.11e-07!2 | |ontology_enrichment_disease=DOID:299!9.53e-10!25;DOID:305!8.69e-09!106;DOID:4929!2.11e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:4929;4.24e-32;2!DOID:2152;1.65e-16;1!DOID:299;3.69e-10;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,4.59e-32,2;DOID:2152,3.07e-16,1;DOID:299,3.73e-10,25 | |||
|ontology_enrichment_uberon=UBERON:0005172!1.34e-13!55;UBERON:0005173!1.34e-13!55;UBERON:0002113!1.32e-12!27;UBERON:0003918!1.32e-12!27;UBERON:0005095!1.32e-12!27;UBERON:0007687!1.32e-12!27;UBERON:0000489!5.82e-12!32;UBERON:0002417!8.81e-12!61;UBERON:0000916!8.81e-12!61;UBERON:0009773!3.33e-11!12;UBERON:0001231!3.33e-11!12;UBERON:0004810!3.33e-11!12;UBERON:0003886!6.57e-10!63;UBERON:0002294!8.90e-10!7;UBERON:0001173!8.90e-10!7;UBERON:0004912!8.90e-10!7;UBERON:0006555!1.22e-09!17;UBERON:0005103!1.22e-09!17;UBERON:0000083!1.22e-09!17;UBERON:0009201!1.22e-09!17;UBERON:0004819!1.22e-09!17;UBERON:0006553!1.22e-09!17;UBERON:0003074!1.22e-09!17;UBERON:0003060!1.22e-09!17;UBERON:0006853!1.34e-09!3;UBERON:0007685!1.34e-09!3;UBERON:0004134!1.34e-09!3;UBERON:0006554!2.90e-09!44;UBERON:0000058!3.72e-09!26;UBERON:0000080!5.07e-09!18;UBERON:0002120!5.07e-09!18;UBERON:0004875!5.07e-09!18;UBERON:0005721!5.07e-09!18;UBERON:0005754!5.07e-09!18;UBERON:0007297!5.07e-09!18;UBERON:0001008!5.50e-09!45;UBERON:0002110!1.16e-08!3;UBERON:0006242!1.16e-08!3;UBERON:0002553!1.74e-08!70;UBERON:0004211!4.15e-08!16;UBERON:0001285!4.15e-08!16;UBERON:0007684!4.15e-08!16;UBERON:0003220!4.15e-08!16;UBERON:0004208!4.15e-08!16;UBERON:0004876!5.67e-08!20;UBERON:0005177!6.60e-08!107;UBERON:0005409!1.42e-07!35;UBERON:0003887!1.59e-07!21;UBERON:0009497!1.92e-07!25;UBERON:0000015!1.92e-07!25;UBERON:0002423!1.92e-07!25;UBERON:0006235!1.92e-07!25;UBERON:0004161!1.92e-07!25;UBERON:0000466!1.96e-07!126;UBERON:0000160!7.74e-07!27 | |ontology_enrichment_uberon=UBERON:0005172!1.34e-13!55;UBERON:0005173!1.34e-13!55;UBERON:0002113!1.32e-12!27;UBERON:0003918!1.32e-12!27;UBERON:0005095!1.32e-12!27;UBERON:0007687!1.32e-12!27;UBERON:0000489!5.82e-12!32;UBERON:0002417!8.81e-12!61;UBERON:0000916!8.81e-12!61;UBERON:0009773!3.33e-11!12;UBERON:0001231!3.33e-11!12;UBERON:0004810!3.33e-11!12;UBERON:0003886!6.57e-10!63;UBERON:0002294!8.90e-10!7;UBERON:0001173!8.90e-10!7;UBERON:0004912!8.90e-10!7;UBERON:0006555!1.22e-09!17;UBERON:0005103!1.22e-09!17;UBERON:0000083!1.22e-09!17;UBERON:0009201!1.22e-09!17;UBERON:0004819!1.22e-09!17;UBERON:0006553!1.22e-09!17;UBERON:0003074!1.22e-09!17;UBERON:0003060!1.22e-09!17;UBERON:0006853!1.34e-09!3;UBERON:0007685!1.34e-09!3;UBERON:0004134!1.34e-09!3;UBERON:0006554!2.90e-09!44;UBERON:0000058!3.72e-09!26;UBERON:0000080!5.07e-09!18;UBERON:0002120!5.07e-09!18;UBERON:0004875!5.07e-09!18;UBERON:0005721!5.07e-09!18;UBERON:0005754!5.07e-09!18;UBERON:0007297!5.07e-09!18;UBERON:0001008!5.50e-09!45;UBERON:0002110!1.16e-08!3;UBERON:0006242!1.16e-08!3;UBERON:0002553!1.74e-08!70;UBERON:0004211!4.15e-08!16;UBERON:0001285!4.15e-08!16;UBERON:0007684!4.15e-08!16;UBERON:0003220!4.15e-08!16;UBERON:0004208!4.15e-08!16;UBERON:0004876!5.67e-08!20;UBERON:0005177!6.60e-08!107;UBERON:0005409!1.42e-07!35;UBERON:0003887!1.59e-07!21;UBERON:0009497!1.92e-07!25;UBERON:0000015!1.92e-07!25;UBERON:0002423!1.92e-07!25;UBERON:0006235!1.92e-07!25;UBERON:0004161!1.92e-07!25;UBERON:0000466!1.96e-07!126;UBERON:0000160!7.74e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0004913;6.99e-17;1!UBERON:0003703;6.99e-17;1!UBERON:0001174;6.99e-17;1!UBERON:0004914;6.99e-17;1!UBERON:0004911;1.65e-16;1!UBERON:0004211;2.79e-14;10!UBERON:0009773;2.79e-14;10!UBERON:0001231;2.79e-14;10!UBERON:0004810;2.79e-14;10!UBERON:0002108;2.09e-13;4!UBERON:0002113;2.00e-10;24!UBERON:0011143;2.00e-10;24!UBERON:0002294;9.73e-10;7!UBERON:0001173;9.73e-10;7!UBERON:0006555;1.01e-09;15!UBERON:0004819;1.01e-09;15!UBERON:0001285;1.01e-09;15!UBERON:0007684;1.01e-09;15!UBERON:0006955;6.42e-09;2!UBERON:0004909;6.42e-09;2!UBERON:0004801;6.42e-09;2!UBERON:0000489;1.13e-08;29!UBERON:0006554;2.16e-08;30!UBERON:0001008;2.16e-08;30!UBERON:0005172;2.30e-08;52!UBERON:0005173;2.30e-08;52!UBERON:0002417;3.27e-07;58!UBERON:0000916;3.27e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,7.57e-17,1;UBERON:0003703,7.57e-17,1;UBERON:0001174,7.57e-17,1;UBERON:0004914,7.57e-17,1;UBERON:0004911,3.07e-16,1;UBERON:0004810,2.44e-14,10;UBERON:0002108,2.09e-13,4;UBERON:0005172,6.55e-10,54;UBERON:0005173,6.55e-10,54;UBERON:0004211,9.19e-10,15;UBERON:0009773,9.19e-10,15;UBERON:0001231,9.19e-10,15;UBERON:0001285,9.19e-10,15;UBERON:0007684,9.19e-10,15;UBERON:0004208,9.19e-10,15;UBERON:0002113,1.10e-09,26;UBERON:0003918,1.10e-09,26;UBERON:0011143,1.10e-09,26;UBERON:0005095,1.10e-09,26;UBERON:0007687,1.10e-09,26;UBERON:0006555,3.45e-09,16;UBERON:0004819,3.45e-09,16;UBERON:0002417,6.82e-09,60;UBERON:0000916,6.82e-09,60;UBERON:0006955,8.09e-09,2;UBERON:0004801,8.09e-09,2;UBERON:0004909,8.74e-09,2;UBERON:0000489,3.66e-08,31;UBERON:0002294,9.52e-08,9;UBERON:0001173,9.52e-08,9;UBERON:0004912,9.52e-08,9;UBERON:0005177,6.08e-07,101 | |||
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| ||
|short_description=p2@SLC15A1 | |short_description=p2@SLC15A1 | ||
}} | }} |
Latest revision as of 07:54, 18 September 2015
Short description: | p2@SLC15A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC15A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -184bp_to_NM_005073, uc001vno.2_5end |
EntrezGene: | SLC15A1 |
HGNC: | 10920 |
UniProt: | B2CQT6P46059 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 3.07e-16 | 1 |
kidney cell | 1.19e-14 | 17 |
kidney epithelial cell | 1.19e-14 | 17 |
kidney tubule cell | 2.44e-14 | 10 |
nephron tubule epithelial cell | 2.44e-14 | 10 |
epithelial cell of nephron | 9.19e-10 | 15 |
epithelial cell of cervix | 8.09e-09 | 2 |
seromucus secreting cell | 8.74e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 7.57e-17 | 1 |
extrahepatic bile duct | 7.57e-17 | 1 |
common bile duct | 7.57e-17 | 1 |
duodenal papilla | 7.57e-17 | 1 |
epithelium of female gonad | 3.07e-16 | 1 |
nephron tubule epithelium | 2.44e-14 | 10 |
small intestine | 2.09e-13 | 4 |
abdomen element | 6.55e-10 | 54 |
abdominal segment element | 6.55e-10 | 54 |
nephron epithelium | 9.19e-10 | 15 |
renal tubule | 9.19e-10 | 15 |
nephron tubule | 9.19e-10 | 15 |
nephron | 9.19e-10 | 15 |
uriniferous tubule | 9.19e-10 | 15 |
nephrogenic mesenchyme | 9.19e-10 | 15 |
kidney | 1.10e-09 | 26 |
kidney mesenchyme | 1.10e-09 | 26 |
upper urinary tract | 1.10e-09 | 26 |
kidney rudiment | 1.10e-09 | 26 |
kidney field | 1.10e-09 | 26 |
excretory tube | 3.45e-09 | 16 |
kidney epithelium | 3.45e-09 | 16 |
abdominal segment of trunk | 6.82e-09 | 60 |
abdomen | 6.82e-09 | 60 |
uterine epithelium | 8.09e-09 | 2 |
cervix epithelium | 8.09e-09 | 2 |
epithelium of gonad | 8.74e-09 | 2 |
cavitated compound organ | 3.66e-08 | 31 |
biliary system | 9.52e-08 | 9 |
biliary tree | 9.52e-08 | 9 |
biliary bud | 9.52e-08 | 9 |
trunk region element | 6.08e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 4.59e-32 | 2 |
ovary epithelial cancer | 3.07e-16 | 1 |
adenocarcinoma | 3.73e-10 | 25 |