FFCP PHASE1:Hg19::chr14:38064495..38064506,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3169 | |EntrezGene=3169 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5021 | |HGNC=5021 | ||
|TSSclassifier=strong | |||
|UniProt=P55317 | |UniProt=P55317 | ||
|association_with_transcript=-6bp_to_NM_004496,uc001wuf.2_5end | |association_with_transcript=-6bp_to_NM_004496,uc001wuf.2_5end | ||
|cluster_id=chr14:38064495..38064506,- | |||
|coexpression_cluster_id=C885 | |||
|description=CAGE_peak_4_at_FOXA1_5end | |description=CAGE_peak_4_at_FOXA1_5end | ||
|id=chr14:38064495..38064506,- | |id=chr14:38064495..38064506,- | ||
|ontology_enrichment_celltype=CL:0000066!1.30e-17!254;CL:0000223!1.14e-07!59 | |ontology_enrichment_celltype=CL:0000066!1.30e-17!254;CL:0000223!1.14e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002553;2.11e-14;1!CL:0002563;5.02e-14;4!CL:0002253;7.52e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.84e-14,1;CL:0002563,5.03e-14,4;CL:0002253,6.58e-08,2;CL:0000066,2.44e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0009847;8.30e-19;3!UBERON:0003353;8.30e-19;3!UBERON:0008425;4.72e-15;1 | |||
|ontology_enrichment_disease=DOID:305!1.38e-33!106;DOID:0050687!3.82e-24!143;DOID:162!3.77e-15!235;DOID:14566!1.49e-14!239;DOID:7!1.08e-13!39;DOID:5093!1.33e-11!4;DOID:1612!1.33e-11!4;DOID:299!2.69e-11!25 | |ontology_enrichment_disease=DOID:305!1.38e-33!106;DOID:0050687!3.82e-24!143;DOID:162!3.77e-15!235;DOID:14566!1.49e-14!239;DOID:7!1.08e-13!39;DOID:5093!1.33e-11!4;DOID:1612!1.33e-11!4;DOID:299!2.69e-11!25 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.72e-54;4!DOID:1612;2.72e-54;4!DOID:7;6.10e-10;39!DOID:3119;5.37e-09;14!DOID:299;7.29e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.38e-54,4;DOID:1612,2.38e-54,4;DOID:7,4.18e-12,39;DOID:305,2.10e-11,106;DOID:3119,5.23e-09,14;DOID:299,6.85e-09,25;DOID:0050687,3.79e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004921!6.87e-21!129;UBERON:0004185!6.87e-21!129;UBERON:0001007!1.40e-16!155;UBERON:0001555!1.40e-16!155;UBERON:0007026!1.40e-16!155;UBERON:0000077!6.49e-15!130;UBERON:0004119!2.76e-14!169;UBERON:0000925!2.76e-14!169;UBERON:0006595!2.76e-14!169;UBERON:0005911!1.16e-11!82;UBERON:0009569!3.39e-11!113;UBERON:0001041!3.67e-11!98;UBERON:0005153!6.16e-10!37;UBERON:0005177!1.00e-09!107;UBERON:0000466!1.09e-08!126;UBERON:0009856!1.52e-08!26;UBERON:0005157!1.98e-08!51;UBERON:0000915!2.06e-08!52;UBERON:0003104!2.43e-08!238;UBERON:0009142!2.43e-08!238;UBERON:0002100!5.88e-08!216;UBERON:0008947!1.07e-07!38;UBERON:0003258!1.07e-07!38;UBERON:0003929!1.28e-07!54;UBERON:0007499!2.43e-07!25;UBERON:0001046!4.08e-07!19;UBERON:0002530!9.22e-07!59 | |ontology_enrichment_uberon=UBERON:0004921!6.87e-21!129;UBERON:0004185!6.87e-21!129;UBERON:0001007!1.40e-16!155;UBERON:0001555!1.40e-16!155;UBERON:0007026!1.40e-16!155;UBERON:0000077!6.49e-15!130;UBERON:0004119!2.76e-14!169;UBERON:0000925!2.76e-14!169;UBERON:0006595!2.76e-14!169;UBERON:0005911!1.16e-11!82;UBERON:0009569!3.39e-11!113;UBERON:0001041!3.67e-11!98;UBERON:0005153!6.16e-10!37;UBERON:0005177!1.00e-09!107;UBERON:0000466!1.09e-08!126;UBERON:0009856!1.52e-08!26;UBERON:0005157!1.98e-08!51;UBERON:0000915!2.06e-08!52;UBERON:0003104!2.43e-08!238;UBERON:0009142!2.43e-08!238;UBERON:0002100!5.88e-08!216;UBERON:0008947!1.07e-07!38;UBERON:0003258!1.07e-07!38;UBERON:0003929!1.28e-07!54;UBERON:0007499!2.43e-07!25;UBERON:0001046!4.08e-07!19;UBERON:0002530!9.22e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.11e-33;10!UBERON:0001443;1.24e-30;11!UBERON:0001242;5.02e-14;4!UBERON:0001262;5.02e-14;4!UBERON:0004786;5.02e-14;4!UBERON:0004808;5.02e-14;4!UBERON:0001277;5.02e-14;4!UBERON:0002367;1.79e-11;11!UBERON:0010147;1.79e-11;11!UBERON:0003937;1.45e-10;12!UBERON:0005399;1.45e-10;12!UBERON:0000915;1.50e-09;52!UBERON:0000485;2.07e-08;7!UBERON:0003929;2.07e-08;7!UBERON:0003350;1.82e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.08e-33,10;UBERON:0001443,1.20e-30,11;UBERON:0001242,5.03e-14,4;UBERON:0001262,5.03e-14,4;UBERON:0004786,5.03e-14,4;UBERON:0004808,5.03e-14,4;UBERON:0001277,5.03e-14,4;UBERON:0000915,3.93e-12,52;UBERON:0002367,1.58e-11,11;UBERON:0010147,1.58e-11,11;UBERON:0009846,1.58e-11,11;UBERON:0003353,1.58e-11,11;UBERON:0004902,1.58e-11,11;UBERON:0003820,1.58e-11,11;UBERON:0009847,1.58e-11,11;UBERON:0001046,1.76e-11,19;UBERON:0003937,1.29e-10,12;UBERON:0005399,1.29e-10,12;UBERON:0000162,3.54e-09,14;UBERON:0001353,3.54e-09,14;UBERON:0000163,3.54e-09,14;UBERON:0006866,3.54e-09,14;UBERON:0000164,3.54e-09,14;UBERON:0000931,3.54e-09,14;UBERON:0005153,5.30e-09,37;UBERON:0004122,1.33e-08,15;UBERON:0003929,1.75e-08,54;UBERON:0003350,1.82e-07,8;UBERON:0005911,2.58e-07,82;UBERON:0005157,4.56e-07,47;UBERON:0009569,7.33e-07,112;UBERON:0002100,8.15e-07,199;UBERON:0000485,9.93e-07,9 | |||
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| ||
|short_description=p4@FOXA1 | |short_description=p4@FOXA1 | ||
}} | }} |
Latest revision as of 23:25, 19 September 2015
Short description: | p4@FOXA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FOXA1_5end |
Coexpression cluster: | C885_breast_Intestinal_MCF7_Prostate_small_colon_Hepatocyte |
Association with transcript: | -6bp_to_NM_004496, uc001wuf.2_5end |
EntrezGene: | FOXA1 |
HGNC: | 5021 |
UniProt: | P55317 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.84e-14 | 1 |
intestinal epithelial cell | 5.03e-14 | 4 |
epithelial cell of large intestine | 6.58e-08 | 2 |
epithelial cell | 2.44e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
breast | 1.08e-33 | 10 |
chest | 1.20e-30 | 11 |
intestinal mucosa | 5.03e-14 | 4 |
wall of intestine | 5.03e-14 | 4 |
gastrointestinal system mucosa | 5.03e-14 | 4 |
gastrointestinal system epithelium | 5.03e-14 | 4 |
intestinal epithelium | 5.03e-14 | 4 |
thoracic segment of trunk | 3.93e-12 | 52 |
prostate gland | 1.58e-11 | 11 |
male accessory sex gland | 1.58e-11 | 11 |
embryonic cloacal epithelium | 1.58e-11 | 11 |
epithelium of hindgut | 1.58e-11 | 11 |
urogenital sinus epithelium | 1.58e-11 | 11 |
prostate bud | 1.58e-11 | 11 |
prostate field | 1.58e-11 | 11 |
hindgut | 1.76e-11 | 19 |
sex gland | 1.29e-10 | 12 |
male reproductive gland | 1.29e-10 | 12 |
cloaca | 3.54e-09 | 14 |
anal region | 3.54e-09 | 14 |
embryonic cloaca | 3.54e-09 | 14 |
terminal part of digestive tract | 3.54e-09 | 14 |
primitive urogenital sinus | 3.54e-09 | 14 |
proctodeum | 3.54e-09 | 14 |
epithelial bud | 5.30e-09 | 37 |
genitourinary system | 1.33e-08 | 15 |
gut epithelium | 1.75e-08 | 54 |
epithelium of mucosa | 1.82e-07 | 8 |
endo-epithelium | 2.58e-07 | 82 |
epithelial fold | 4.56e-07 | 47 |
subdivision of trunk | 7.33e-07 | 112 |
trunk | 8.15e-07 | 199 |
simple columnar epithelium | 9.93e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.38e-54 | 4 |
breast cancer | 2.38e-54 | 4 |
disease of anatomical entity | 4.18e-12 | 39 |
carcinoma | 2.10e-11 | 106 |
gastrointestinal system cancer | 5.23e-09 | 14 |
adenocarcinoma | 6.85e-09 | 25 |
cell type cancer | 3.79e-08 | 143 |