FFCP PHASE1:Hg19::chr1:2985566..2985608,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63976 | |EntrezGene=63976 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14000 | |HGNC=14000 | ||
|TSSclassifier=strong | |||
|UniProt=D6RDW0 | |UniProt=D6RDW0 | ||
|association_with_transcript=-123bp_to_ENST00000511072_5end | |association_with_transcript=-123bp_to_ENST00000511072_5end | ||
|cluster_id=chr1:2985566..2985608,+ | |||
|description=CAGE_peak_3_at_PRDM16_5end | |description=CAGE_peak_3_at_PRDM16_5end | ||
|id=chr1:2985566..2985608,+ | |id=chr1:2985566..2985608,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002586;7.14e-21;3!CL:0002605;4.83e-20;3!CL:0000149;8.47e-16;4!CL:0000128;6.82e-09;7!CL:0000126;6.82e-09;7!CL:0000127;6.82e-09;7!CL:0000228;1.11e-07;1!CL:0002372;1.11e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,9.05e-21,3;CL:0002605,2.78e-20,3;CL:0000149,1.01e-15,4;CL:0000128,5.42e-09,7;CL:0000126,5.42e-09,7;CL:0000127,5.42e-09,7;CL:0002453,5.42e-09,7;CL:0000228,1.11e-07,1;CL:0002372,1.11e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.70e-08;1!UBERON:0004140;4.20e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!1.64e-45!34;UBERON:0002791!4.71e-44!33;UBERON:0007023!2.81e-43!115;UBERON:0001869!3.19e-43!32;UBERON:0002020!1.19e-42!34;UBERON:0003528!1.19e-42!34;UBERON:0005743!3.43e-38!86;UBERON:0002780!3.97e-38!41;UBERON:0001890!3.97e-38!41;UBERON:0006240!3.97e-38!41;UBERON:0003080!5.95e-37!42;UBERON:0001049!8.29e-37!57;UBERON:0005068!8.29e-37!57;UBERON:0006241!8.29e-37!57;UBERON:0007135!8.29e-37!57;UBERON:0000073!2.01e-34!94;UBERON:0001016!2.01e-34!94;UBERON:0000956!1.04e-33!25;UBERON:0000203!1.04e-33!25;UBERON:0003075!1.23e-33!86;UBERON:0007284!1.23e-33!86;UBERON:0001017!4.77e-33!82;UBERON:0002616!4.96e-33!59;UBERON:0000955!1.42e-32!69;UBERON:0006238!1.42e-32!69;UBERON:0002346!2.08e-31!90;UBERON:0003056!3.47e-31!61;UBERON:0000153!3.85e-29!129;UBERON:0007811!3.85e-29!129;UBERON:0002619!4.68e-29!22;UBERON:0000033!6.53e-29!123;UBERON:0001950!3.53e-26!20;UBERON:0004121!2.25e-22!169;UBERON:0000924!2.09e-21!173;UBERON:0006601!2.09e-21!173;UBERON:0000025!4.75e-14!194;UBERON:0000481!7.19e-14!347;UBERON:0004111!1.72e-13!241;UBERON:0002420!7.78e-13!9;UBERON:0007245!7.78e-13!9;UBERON:0010009!7.78e-13!9;UBERON:0010011!7.78e-13!9;UBERON:0000454!7.78e-13!9;UBERON:0000064!4.98e-12!219;UBERON:0000477!1.75e-11!286;UBERON:0001871!3.43e-11!7;UBERON:0009663!1.29e-10!7;UBERON:0000062!2.32e-10!511;UBERON:0002308!2.47e-10!9;UBERON:0000125!2.47e-10!9;UBERON:0000483!7.93e-10!309;UBERON:0000475!1.49e-09!365;UBERON:0000119!1.52e-09!312;UBERON:0002021!6.91e-09!5;UBERON:0000922!1.17e-08!612;UBERON:0000468!1.49e-08!659;UBERON:0001872!3.64e-08!5;UBERON:0000349!5.14e-08!5;UBERON:0000467!8.54e-08!625;UBERON:0000480!9.85e-08!626;UBERON:0002050!9.90e-08!605;UBERON:0005423!9.90e-08!605;UBERON:0000923!2.37e-07!604;UBERON:0005291!2.37e-07!604;UBERON:0006598!2.37e-07!604;UBERON:0002532!2.37e-07!604;UBERON:0000369!3.51e-07!4;UBERON:0002435!3.51e-07!4;UBERON:0000204!3.51e-07!4;UBERON:0010082!3.51e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;6.61e-28;25!UBERON:0000203;6.61e-28;25!UBERON:0002791;4.80e-24;32!UBERON:0001869;6.54e-24;32!UBERON:0003528;2.66e-22;34!UBERON:0002020;2.66e-22;34!UBERON:0000966;5.89e-22;5!UBERON:0005388;5.89e-22;5!UBERON:0001802;5.89e-22;5!UBERON:0001781;7.14e-21;3!UBERON:0001782;7.14e-21;3!UBERON:0001893;2.97e-20;34!UBERON:0002114;1.24e-19;2!UBERON:0002619;9.14e-17;22!UBERON:0002780;1.54e-15;41!UBERON:0001890;1.54e-15;41!UBERON:0001950;3.11e-14;20!UBERON:0002021;2.98e-12;5!UBERON:0002108;5.19e-12;4!UBERON:0000073;3.72e-10;53!UBERON:0002616;3.72e-10;53!UBERON:0000955;1.02e-08;68!UBERON:0001017;2.11e-08;75!UBERON:0002146;4.20e-08;1!UBERON:0005623;4.20e-08;1!UBERON:0002022;1.11e-07;1!UBERON:0004913;1.11e-07;1!UBERON:0003703;1.11e-07;1!UBERON:0001174;1.11e-07;1!UBERON:0004914;1.11e-07;1!UBERON:0001016;2.50e-07;83!UBERON:0000922;4.27e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.18e-27,25;UBERON:0000203,1.18e-27,25;UBERON:0002791,1.46e-25,32;UBERON:0001869,1.46e-25,32;UBERON:0003528,5.65e-24,34;UBERON:0002020,5.65e-24,34;UBERON:0001893,5.65e-24,34;UBERON:0003056,1.89e-23,61;UBERON:0003075,9.84e-22,82;UBERON:0007284,9.84e-22,82;UBERON:0001782,9.05e-21,3;UBERON:0005424,9.05e-21,3;UBERON:0002346,1.45e-20,86;UBERON:0002780,1.31e-19,41;UBERON:0001890,1.31e-19,41;UBERON:0003080,1.31e-19,41;UBERON:0006240,1.31e-19,41;UBERON:0002114,1.71e-19,2;UBERON:0000966,2.91e-18,6;UBERON:0005388,2.91e-18,6;UBERON:0001802,2.91e-18,6;UBERON:0000955,1.18e-17,68;UBERON:0006238,1.18e-17,68;UBERON:0000073,1.52e-17,53;UBERON:0002616,1.52e-17,53;UBERON:0001017,1.40e-16,81;UBERON:0001049,1.73e-16,56;UBERON:0005068,1.73e-16,56;UBERON:0006241,1.73e-16,56;UBERON:0007135,1.73e-16,56;UBERON:0002619,1.75e-16,22;UBERON:0010371,2.05e-16,104;UBERON:0001781,1.01e-15,4;UBERON:0001016,1.20e-14,89;UBERON:0001950,6.28e-14,20;UBERON:0010314,7.68e-14,132;UBERON:0004121,1.06e-13,171;UBERON:0000924,1.06e-13,171;UBERON:0006601,1.06e-13,171;UBERON:0002021,4.47e-12,5;UBERON:0002108,6.30e-12,4;UBERON:0002146,3.10e-08,1;UBERON:0005623,3.10e-08,1;UBERON:0004913,1.54e-07,1;UBERON:0003703,1.54e-07,1;UBERON:0001174,1.54e-07,1;UBERON:0004914,1.54e-07,1;UBERON:0002022,1.87e-07,1 | |||
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|short_description=p3@PRDM16 | |short_description=p3@PRDM16 | ||
}} | }} |
Latest revision as of 11:43, 17 September 2015
Short description: | p3@PRDM16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRDM16_5end |
Coexpression cluster: | NA |
Association with transcript: | -123bp_to_ENST00000511072_5end |
EntrezGene: | PRDM16 |
HGNC: | 14000 |
UniProt: | D6RDW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 9.05e-21 | 3 |
astrocyte of the cerebral cortex | 2.78e-20 | 3 |
visual pigment cell | 1.01e-15 | 4 |
oligodendrocyte | 5.42e-09 | 7 |
macroglial cell | 5.42e-09 | 7 |
astrocyte | 5.42e-09 | 7 |
oligodendrocyte precursor cell | 5.42e-09 | 7 |
multinucleate cell | 1.11e-07 | 1 |
myotube | 1.11e-07 | 1 |