FFCP PHASE1:Hg19::chr1:94798754..94798777,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-45bp_to_ENST00000418242_5end | |association_with_transcript=-45bp_to_ENST00000418242_5end | ||
|cluster_id=chr1:94798754..94798777,+ | |||
|description=CAGE_peak_1_at_ENST00000418242_5end | |description=CAGE_peak_1_at_ENST00000418242_5end | ||
|id=chr1:94798754..94798777,+ | |id=chr1:94798754..94798777,+ | ||
|ontology_enrichment_celltype=CL:1000449!2.06e-10!16;CL:1000507!2.22e-10!12;CL:1000494!2.22e-10!12;CL:0002681!4.89e-09!13;CL:0002584!4.89e-09!13;CL:1000497!7.29e-09!18;CL:0002518!7.29e-09!18;CL:0000183!2.23e-08!59;CL:0000359!7.93e-08!32;CL:0000222!1.07e-07!119;CL:0000680!3.66e-07!57;CL:0000056!3.66e-07!57;CL:0000355!3.66e-07!57 | |ontology_enrichment_celltype=CL:1000449!2.06e-10!16;CL:1000507!2.22e-10!12;CL:1000494!2.22e-10!12;CL:0002681!4.89e-09!13;CL:0002584!4.89e-09!13;CL:1000497!7.29e-09!18;CL:0002518!7.29e-09!18;CL:0000183!2.23e-08!59;CL:0000359!7.93e-08!32;CL:0000222!1.07e-07!119;CL:0000680!3.66e-07!57;CL:0000056!3.66e-07!57;CL:0000355!3.66e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002592;7.15e-20;3!CL:0000359;1.96e-14;32!CL:0000239;1.01e-09;3!CL:1000615;1.01e-09;3!CL:0002306;1.01e-09;3!CL:0002594;1.35e-07;4!CL:0000192;2.00e-07;43!CL:1000449;2.91e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,8.43e-20,3;CL:0000359,5.63e-15,32;CL:0000192,8.86e-11,43;CL:0000514,8.86e-11,43;CL:0000239,8.91e-10,3;CL:1000615,8.91e-10,3;CL:0002306,8.91e-10,3;CL:0000187,4.06e-08,55;CL:0002594,1.19e-07,4;CL:0000680,1.26e-07,58;CL:0000056,1.26e-07,58;CL:0000355,1.26e-07,58;CL:1000449,2.68e-07,15;CL:0000393,3.51e-07,61;CL:0000211,3.51e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;2.00e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;2.99e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,3.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005256!6.66e-11!143;UBERON:0004211!2.06e-10!16;UBERON:0001285!2.06e-10!16;UBERON:0007684!2.06e-10!16;UBERON:0003220!2.06e-10!16;UBERON:0004208!2.06e-10!16;UBERON:0009773!2.22e-10!12;UBERON:0001231!2.22e-10!12;UBERON:0004810!2.22e-10!12;UBERON:0006554!4.31e-10!44;UBERON:0001008!1.03e-09!45;UBERON:0006555!1.37e-09!17;UBERON:0005103!1.37e-09!17;UBERON:0000083!1.37e-09!17;UBERON:0009201!1.37e-09!17;UBERON:0004819!1.37e-09!17;UBERON:0006553!1.37e-09!17;UBERON:0003074!1.37e-09!17;UBERON:0003060!1.37e-09!17;UBERON:0003064!1.61e-09!37;UBERON:0003887!2.12e-09!21;UBERON:0003104!4.78e-09!238;UBERON:0009142!4.78e-09!238;UBERON:0001225!4.89e-09!13;UBERON:0008987!4.89e-09!13;UBERON:0000080!7.29e-09!18;UBERON:0002120!7.29e-09!18;UBERON:0004875!7.29e-09!18;UBERON:0005721!7.29e-09!18;UBERON:0005754!7.29e-09!18;UBERON:0007297!7.29e-09!18;UBERON:0001851!2.08e-08!16;UBERON:0002100!4.84e-08!216;UBERON:0000481!6.23e-08!347;UBERON:0002113!6.47e-08!27;UBERON:0003918!6.47e-08!27;UBERON:0005095!6.47e-08!27;UBERON:0007687!6.47e-08!27;UBERON:0000353!1.15e-07!17;UBERON:0004876!1.23e-07!20;UBERON:0000486!1.74e-07!82;UBERON:0001637!2.97e-07!42;UBERON:0003509!2.97e-07!42;UBERON:0004572!2.97e-07!42;UBERON:0000058!4.52e-07!26;UBERON:0000475!5.71e-07!365;UBERON:0003914!6.12e-07!118;UBERON:0000489!6.72e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;7.15e-20;3!UBERON:0005985;7.15e-20;3!UBERON:0001621;7.15e-20;3!UBERON:0004573;9.32e-10;33!UBERON:0004571;9.32e-10;33!UBERON:0006853;1.01e-09;3!UBERON:0007685;1.01e-09;3!UBERON:0004134;1.01e-09;3!UBERON:0001637;8.09e-09;42!UBERON:0003509;8.09e-09;42!UBERON:0004572;8.09e-09;42!UBERON:0007195;1.22e-07;1!UBERON:0001310;1.35e-07;4!UBERON:0006554;2.53e-07;30!UBERON:0001008;2.53e-07;30!UBERON:0006555;2.91e-07;15!UBERON:0004819;2.91e-07;15!UBERON:0001285;2.91e-07;15!UBERON:0007684;2.91e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,8.43e-20,3;UBERON:0001637,1.23e-13,42;UBERON:0003509,1.23e-13,42;UBERON:0004572,1.23e-13,42;UBERON:0003498,4.14e-12,5;UBERON:0005985,4.14e-12,5;UBERON:0004573,2.80e-11,33;UBERON:0004571,2.80e-11,33;UBERON:0006853,8.91e-10,3;UBERON:0007685,8.91e-10,3;UBERON:0004134,8.91e-10,3;UBERON:0003914,1.62e-09,117;UBERON:0007500,3.22e-09,59;UBERON:0001981,3.22e-09,59;UBERON:0004537,3.22e-09,59;UBERON:0006965,3.22e-09,59;UBERON:0004872,5.30e-09,83;UBERON:0000055,8.89e-08,68;UBERON:0001310,1.19e-07,4;UBERON:0007195,1.44e-07,1;UBERON:0000486,1.77e-07,83;UBERON:0004211,2.68e-07,15;UBERON:0009773,2.68e-07,15;UBERON:0001231,2.68e-07,15;UBERON:0001285,2.68e-07,15;UBERON:0007684,2.68e-07,15;UBERON:0004208,2.68e-07,15;UBERON:0001134,4.83e-07,62;UBERON:0002036,4.83e-07,62;UBERON:0003082,4.83e-07,62;UBERON:0006555,7.60e-07,16;UBERON:0004819,7.60e-07,16;UBERON:0002385,8.85e-07,64;UBERON:0001015,8.85e-07,64;UBERON:0000383,8.85e-07,64 | |||
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| ||
|short_description=p1@ENST00000418242 | |short_description=p1@ENST00000418242 | ||
}} | }} |
Latest revision as of 11:31, 28 July 2015
Short description: | p1@ENST00000418242 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000418242_5end |
Coexpression cluster: | NA |
Association with transcript: | -45bp_to_ENST00000418242_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 8.43e-20 | 3 |
vascular associated smooth muscle cell | 5.63e-15 | 32 |
smooth muscle cell | 8.86e-11 | 43 |
smooth muscle myoblast | 8.86e-11 | 43 |
brush border epithelial cell | 8.91e-10 | 3 |
kidney cortex tubule cell | 8.91e-10 | 3 |
epithelial cell of proximal tubule | 8.91e-10 | 3 |
muscle cell | 4.06e-08 | 55 |
smooth muscle cell of the umbilical artery | 1.19e-07 | 4 |
muscle precursor cell | 1.26e-07 | 58 |
myoblast | 1.26e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.26e-07 | 58 |
epithelial cell of nephron | 2.68e-07 | 15 |
electrically responsive cell | 3.51e-07 | 61 |
electrically active cell | 3.51e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 8.43e-20 | 3 |
artery | 1.23e-13 | 42 |
arterial blood vessel | 1.23e-13 | 42 |
arterial system | 1.23e-13 | 42 |
heart blood vessel | 4.14e-12 | 5 |
coronary vessel | 4.14e-12 | 5 |
systemic artery | 2.80e-11 | 33 |
systemic arterial system | 2.80e-11 | 33 |
renal cortex tubule | 8.91e-10 | 3 |
region of nephron tubule | 8.91e-10 | 3 |
proximal tubule | 8.91e-10 | 3 |
epithelial tube | 1.62e-09 | 117 |
epithelial tube open at both ends | 3.22e-09 | 59 |
blood vessel | 3.22e-09 | 59 |
blood vasculature | 3.22e-09 | 59 |
vascular cord | 3.22e-09 | 59 |
splanchnic layer of lateral plate mesoderm | 5.30e-09 | 83 |
vessel | 8.89e-08 | 68 |
umbilical artery | 1.19e-07 | 4 |
stroma of bone marrow | 1.44e-07 | 1 |
multilaminar epithelium | 1.77e-07 | 83 |
nephron epithelium | 2.68e-07 | 15 |
renal tubule | 2.68e-07 | 15 |
nephron tubule | 2.68e-07 | 15 |
nephron | 2.68e-07 | 15 |
uriniferous tubule | 2.68e-07 | 15 |
nephrogenic mesenchyme | 2.68e-07 | 15 |
skeletal muscle tissue | 4.83e-07 | 62 |
striated muscle tissue | 4.83e-07 | 62 |
myotome | 4.83e-07 | 62 |
excretory tube | 7.60e-07 | 16 |
kidney epithelium | 7.60e-07 | 16 |
muscle tissue | 8.85e-07 | 64 |
musculature | 8.85e-07 | 64 |
musculature of body | 8.85e-07 | 64 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 3.10e-08 | 1 |