FFCP PHASE1:Hg19::chr20:36767914..36767938,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:36767914..36767938,- | |||
|coexpression_cluster_id=C454 | |||
|description=CAGE_peak_at_chr20:36767914..36767938,- | |description=CAGE_peak_at_chr20:36767914..36767938,- | ||
|id=chr20:36767914..36767938,- | |id=chr20:36767914..36767938,- | ||
|ontology_enrichment_celltype=CL:0000115!1.28e-10!35;CL:0000222!4.22e-10!119;CL:0002139!7.22e-10!24;CL:0000192!1.45e-09!42;CL:0000514!1.45e-09!42;CL:0002078!1.65e-08!44;CL:0000359!4.50e-08!32;CL:0000071!5.13e-07!18;CL:0002546!5.13e-07!18;CL:0000187!5.32e-07!54;CL:0000183!7.07e-07!59 | |ontology_enrichment_celltype=CL:0000115!1.28e-10!35;CL:0000222!4.22e-10!119;CL:0002139!7.22e-10!24;CL:0000192!1.45e-09!42;CL:0000514!1.45e-09!42;CL:0002078!1.65e-08!44;CL:0000359!4.50e-08!32;CL:0000071!5.13e-07!18;CL:0002546!5.13e-07!18;CL:0000187!5.32e-07!54;CL:0000183!7.07e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.58e-16;19!CL:0000359;6.08e-08;32!CL:0002577;8.54e-08;3!CL:0000115;9.88e-08;36!CL:0000192;7.82e-07;43!CL:1000746;8.90e-07;7!CL:1000612;8.90e-07;7!CL:0002541;9.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.07e-16,19;CL:0000192,1.99e-09,43;CL:0000514,1.99e-09,43;CL:0000115,2.75e-09,36;CL:0000222,1.41e-08,121;CL:0000359,3.70e-08,32;CL:0002577,9.88e-08,3;CL:0002541,8.59e-07,3;CL:0002139,9.08e-07,24;CL:1000746,9.50e-07,7;CL:1000612,9.50e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000514;7.82e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.80e-21!118;UBERON:0002049!3.17e-20!79;UBERON:0007798!3.17e-20!79;UBERON:0000055!4.98e-18!69;UBERON:0004872!5.46e-17!84;UBERON:0001981!6.73e-16!60;UBERON:0007500!6.73e-16!60;UBERON:0004537!6.73e-16!60;UBERON:0006965!6.73e-16!60;UBERON:0001009!1.78e-15!113;UBERON:0004111!2.40e-15!241;UBERON:0000477!3.95e-15!286;UBERON:0000490!3.84e-14!138;UBERON:0004535!4.82e-14!110;UBERON:0000119!6.43e-14!312;UBERON:0005256!9.85e-14!143;UBERON:0000483!1.32e-13!309;UBERON:0000025!1.82e-12!194;UBERON:0002100!1.35e-11!216;UBERON:0000481!3.99e-11!347;UBERON:0001637!7.30e-11!42;UBERON:0003509!7.30e-11!42;UBERON:0004572!7.30e-11!42;UBERON:0000468!3.25e-10!659;UBERON:0005631!7.69e-10!14;UBERON:0000158!7.69e-10!14;UBERON:0000467!4.06e-09!625;UBERON:0000480!5.41e-09!626;UBERON:0004573!7.87e-09!33;UBERON:0004571!7.87e-09!33;UBERON:0003104!3.79e-08!238;UBERON:0009142!3.79e-08!238;UBERON:0000926!4.99e-08!448;UBERON:0004120!4.99e-08!448;UBERON:0006603!4.99e-08!448;UBERON:0002050!8.59e-08!605;UBERON:0005423!8.59e-08!605;UBERON:0000923!1.38e-07!604;UBERON:0005291!1.38e-07!604;UBERON:0006598!1.38e-07!604;UBERON:0002532!1.38e-07!604;UBERON:0000922!2.15e-07!612;UBERON:0004290!3.31e-07!70;UBERON:0000478!4.87e-07!24;UBERON:0001986!5.13e-07!18;UBERON:0004638!5.13e-07!18;UBERON:0004852!5.13e-07!18;UBERON:0000914!5.52e-07!83;UBERON:0002329!5.52e-07!83;UBERON:0003077!5.52e-07!83;UBERON:0003059!5.52e-07!83;UBERON:0007282!5.52e-07!83;UBERON:0009618!5.52e-07!83;UBERON:0007285!5.52e-07!83;UBERON:0002385!5.75e-07!63;UBERON:0001015!5.75e-07!63;UBERON:0000383!5.75e-07!63;UBERON:0003124!9.16e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.80e-12;10!UBERON:0000158;1.80e-12;10!UBERON:0000478;3.42e-12;24!UBERON:0001637;1.33e-08;42!UBERON:0003509;1.33e-08;42!UBERON:0004572;1.33e-08;42!UBERON:0002049;1.86e-08;75!UBERON:0007798;1.86e-08;75!UBERON:0000305;1.19e-07;7!UBERON:0000074;8.90e-07;7!UBERON:0001229;8.90e-07;7!UBERON:0003124;9.38e-07;3!UBERON:0000920;9.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.64e-20,117;UBERON:0005631,9.32e-17,14;UBERON:0000158,9.32e-17,14;UBERON:0000490,1.25e-15,148;UBERON:0004872,2.45e-14,83;UBERON:0002049,2.50e-14,78;UBERON:0007798,2.50e-14,78;UBERON:0005256,4.73e-14,122;UBERON:0000055,1.76e-13,68;UBERON:0001009,8.59e-13,112;UBERON:0007500,1.65e-12,59;UBERON:0001981,1.65e-12,59;UBERON:0004537,1.65e-12,59;UBERON:0006965,1.65e-12,59;UBERON:0000478,2.89e-12,24;UBERON:0003104,3.58e-12,160;UBERON:0009142,3.58e-12,160;UBERON:0001637,1.17e-11,42;UBERON:0003509,1.17e-11,42;UBERON:0004572,1.17e-11,42;UBERON:0004535,1.98e-11,109;UBERON:0003124,6.98e-11,7;UBERON:0000483,2.87e-10,306;UBERON:0000119,5.07e-10,309;UBERON:0000025,1.30e-09,192;UBERON:0007503,2.64e-09,78;UBERON:0004111,1.05e-08,240;UBERON:0000926,3.66e-08,315;UBERON:0004120,3.66e-08,315;UBERON:0006603,3.66e-08,315;UBERON:0005103,5.20e-08,8;UBERON:0000083,5.20e-08,8;UBERON:0009201,5.20e-08,8;UBERON:0006553,5.20e-08,8;UBERON:0003074,5.20e-08,8;UBERON:0003060,5.20e-08,8;UBERON:0003081,9.59e-08,203;UBERON:0000305,1.13e-07,7;UBERON:0002100,4.01e-07,199;UBERON:0000080,4.86e-07,9;UBERON:0002120,4.86e-07,9;UBERON:0004875,4.86e-07,9;UBERON:0005721,4.86e-07,9;UBERON:0005754,4.86e-07,9;UBERON:0007297,4.86e-07,9;UBERON:0000920,8.59e-07,3;UBERON:0010532,9.50e-07,7;UBERON:0000074,9.50e-07,7;UBERON:0001229,9.50e-07,7;UBERON:0001230,9.50e-07,7;UBERON:0003220,9.50e-07,7;UBERON:0005749,9.50e-07,7;UBERON:0004199,9.50e-07,7;UBERON:0004209,9.50e-07,7;UBERON:0004198,9.50e-07,7 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,1.78784437770915,3.48935409640147,0,0,0,0.245733936501509,1.39560233594486,2.40285509343189,5.80287352102598,0.123766352960047,0,2.01697543935533,1.80808358407193,0,0.975865597581014,0.246242116153576,1.22400414746552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0.472674085820339,4.65631734671384,3.42555664203192,0.0654895377488563,0.364295288292542,0,0,0.174129737299267,2.26028532882071,0,0,0,0.198762407366705,0,0,0,2.93649605346934,6.87795104850169,1.46296476575767,0.516833518338658,0.35576626268671,1.00416183829401,0.402829317109147,2.28081631715554,0.732186172644509,0.735326160691737,7.29127753093584,0.357198913136319,0.898117490504679,0.337834441449967,1.53316637465883,0.949265659568129,1.64881569537367,0,0,0,0.993943903390637,0.506522046658319,0.132409180813219,0.286836620748814,1.06400514659507,1.12135520028461,0,1.72667283892012,0,0.134710672069688,0,0.151357427644931,0,0,0.312160076830321,0.570471821544449,0,0,0,0,0.204154171254893,0.245668634623536,0.309977343527296,0,0.741800787835671,0,0.718618141816238,0,0,0,0,0.612975591598039,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0,0,0,0,0,0,1.56449532329816,1.92972281457866,1.38134921352481,0.464367928031979,0,0.118306800039844,0.168584690078102,0.241011029883482,0.110293972732394,0,0,0,0,0,2.21446636387394,0,0,0,2.53510069643662,3.9313088667105,1.77236972004421,0,0,1.02940686179115,0,0,0,0.0925884451585296,0,0,7.21656710126366,0,0.234817388471643,0.433099343283221,1.85194205030644,2.47330397904978,0,0,0,0.468008530278475,0.594524649154913,0,0.671928512795438,0.283550194484773,0,0,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.87192013766656,0,0.129271715757778,0,0,2.39344304926383,2.08014873822732,0.257207374262142,0,0,1.14382394926518,1.62786481617433,0.823240336780769,0,2.48774364119782,2.37585561880029,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50119364741774,0.271265023699736,1.24782516918484,3.7470087647404,0.315404830067869,1.17141414992713,0,0,0,0.664225598535437,0.737476674166813,0.0868836144680828,0,0,0,0,0,2.12189300012382,4.99306318531491,12.0956117331872,0.248107807818777,0.306923946576125,0.561320188866147,0.256278298511402,0,0.160853921143607,0,0.616838775210622,0.532685175939381,0,1.03850885836724,0.232420756919918,0.604297247958111,2.00506470303285,0,0.459257792658427,0.910455840033585,2.22911505431021,0.451199612907412,0.231046011313244,0.784349769176855,0,0,2.27466768141793,1.70093705276516,0.431831832204279,1.54227252690289,0,1.00337954770971,0.254876273045038,0.831076008928724,0,0.438519753291869,0,0,0.328014645699706,0,0.412164046590889,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0,0.10115778085555,1.39453664789186,0.94443704049192,0.6970372701606,0,0,0.869932992075073,1.11194531462352,0.286249773483982,0,0,0.38126038784765,0,0,0,1.56989728039846,1.61885211824983,1.37268514868027,1.06031162111118,0.404364963146632,6.34041284692033,2.52755073743389,0,0.974853958525138,2.11300293513511,0.272999822815972,0.848432591722276,0,0,7.96126770289464,8.33056681982149,0,1.31178950409327,0,3.0982349809975,2.53526042279017,0.717056761020258,0.196498082026242,1.07001315444375,0.354761064070598,0,0,0.379473173765715,0.349934720244983,0,0,0,0.282431402330337,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0,0,2.27308917445131,0.71623345421307,0,1.53580351049616,0,0,1.22439575525196,0,0,0.796991953004279,0,0,0,0,0,1.16828856491525,0.358042349351218,0,0.394573622547734,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,1.15425387755696,0,0,0,0,1.91400695839152,1.09917112082235,4.26427820814908,0,0,0.166211681900156,0.225595660617181,0,0,0,0,1.26598838716816,0.163232808159148,0,0,0,0.176915129006678,0,0,0,0,0.134802265961354,0,0,0,0,0.728341138602278,0,0,0,0.126373159256976,0,0,0,0.661983911750998,0.313932918407225,0,0,0.416024019039416,0,0,0,1.04836000945218,0.171986032471617,0.290268993867255,0.146178634172371,0.0821154570532092,0.193978032976839,0.176512253383001,1.12990370390266,0.685209623233754,0.19871461170299,0,0,0.240476460754601,1.70762395791482,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0.558564802544508,0,1.43574604915363,1.39775300349294,2.57535628881943,0.89268582976749,0.335917362433631,0,0,0,0,0.0674035438541849,0.0984274815147488,0,0,0.408610218334727,0.160753148465019,0,0,0,0,0,0,0.157611414598396,0.05245458813499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| ||
|short_description=p@chr20:36767914..36767938,- | |short_description=p@chr20:36767914..36767938,- | ||
}} | }} |
Latest revision as of 13:51, 28 July 2015
Short description: | p@chr20:36767914..36767938, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:36767914..36767938, - |
Coexpression cluster: | C454_Placental_Amniotic_Smooth_Mesenchymal_Lens_Renal_bile |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.07e-16 | 19 |
smooth muscle cell | 1.99e-09 | 43 |
smooth muscle myoblast | 1.99e-09 | 43 |
endothelial cell | 2.75e-09 | 36 |
mesodermal cell | 1.41e-08 | 121 |
vascular associated smooth muscle cell | 3.70e-08 | 32 |
placental epithelial cell | 9.88e-08 | 3 |
chorionic membrane mesenchymal stem cell | 8.59e-07 | 3 |
endothelial cell of vascular tree | 9.08e-07 | 24 |
glomerular cell | 9.50e-07 | 7 |
kidney corpuscule cell | 9.50e-07 | 7 |