FFCP PHASE1:Hg19::chr11:70309509..70309517,+: Difference between revisions
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|id=chr11:70309509..70309517,+
|short_description=p@chr11:70309509..70309517,+
|description=CAGE_peak_at_chr11:70309509..70309517,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:70309509..70309517,+ | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_at_chr11:70309509..70309517,+ | |||
|id=chr11:70309509..70309517,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.02e-18!5;CL:0000039!1.08e-13!7;CL:0000586!1.08e-13!7;CL:0000540!1.86e-07!6;CL:0000031!1.86e-07!6;CL:0000404!1.86e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000322;1.60e-14;3!CL:0000082;2.41e-09;19!CL:0000945;1.15e-07;24!CL:0000039;6.21e-07;7!CL:0000586;6.21e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.60e-14,3;CL:0000082,2.46e-09,19;CL:0000945,1.15e-07,24;CL:0000826,1.15e-07,24;CL:0000039,6.04e-07,7;CL:0000586,6.04e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2355!9.57e-12!1;DOID:0060085!2.42e-11!1;DOID:3165!2.42e-11!1;DOID:0060121!2.42e-11!1;DOID:2438!2.42e-11!1;DOID:4418!2.42e-11!1;DOID:3908!3.53e-09!5 | |||
|ontology_enrichment_disease_v019=DOID:2355;9.91e-41;1!DOID:3908;2.16e-32;5!DOID:74;3.81e-21;2!DOID:3910;4.66e-21;2!DOID:3905;1.54e-18;9!DOID:0060058;5.90e-17;10!DOID:4556;1.96e-14;3!DOID:1324;1.46e-11;15!DOID:1287;2.80e-11;4!DOID:0050615;6.62e-11;16!DOID:1325;5.70e-07;7!DOID:3904;5.70e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,9.91e-41,1;DOID:3908,2.34e-32,5;DOID:74,3.81e-21,2;DOID:3910,4.66e-21,2;DOID:3905,1.61e-18,9;DOID:0060058,5.90e-17,10;DOID:4556,2.09e-14,3;DOID:1324,1.50e-11,15;DOID:1287,2.80e-11,4;DOID:0050615,6.78e-11,16;DOID:1325,5.70e-07,7;DOID:3904,5.70e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.40e-31!8;UBERON:0003135!5.65e-23!11;UBERON:0000991!5.29e-12!21;UBERON:0009196!5.29e-12!21;UBERON:0009117!5.29e-12!21;UBERON:0005564!5.29e-12!21;UBERON:0004176!1.88e-11!22;UBERON:0003101!1.88e-11!22;UBERON:0000079!1.88e-11!22;UBERON:0002323!1.74e-07!46;UBERON:0004458!5.35e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;4.66e-21;2!UBERON:0002173;4.66e-21;2!UBERON:0002186;4.66e-21;2!UBERON:0004821;1.60e-14;3!UBERON:0007499;1.60e-14;3!UBERON:0003215;1.60e-14;3!UBERON:0010368;1.60e-14;3!UBERON:0009911;1.60e-14;3!UBERON:0002299;1.60e-14;3!UBERON:0006524;1.60e-14;3!UBERON:0008874;1.60e-14;3!UBERON:0002169;1.60e-14;3!UBERON:0004894;1.60e-14;3!UBERON:0009856;3.10e-11;4!UBERON:0004802;2.41e-09;19!UBERON:0000115;2.41e-09;19!UBERON:0002048;3.32e-08;22!UBERON:0004807;3.32e-08;22!UBERON:0000117;3.32e-08;22!UBERON:0000171;3.32e-08;22!UBERON:0000170;3.32e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,4.66e-21,2;UBERON:0002173,4.66e-21,2;UBERON:0002186,4.66e-21,2;UBERON:0004821,1.60e-14,3;UBERON:0003215,1.60e-14,3;UBERON:0010368,1.60e-14,3;UBERON:0009911,1.60e-14,3;UBERON:0002299,1.60e-14,3;UBERON:0006524,1.60e-14,3;UBERON:0008874,1.60e-14,3;UBERON:0002169,1.60e-14,3;UBERON:0004894,1.60e-14,3;UBERON:0004802,2.46e-09,19;UBERON:0000115,2.46e-09,19;UBERON:0002048,3.39e-08,22;UBERON:0000117,3.39e-08,22;UBERON:0000171,3.39e-08,22;UBERON:0000170,3.39e-08,22;UBERON:0005597,3.39e-08,22;UBERON:0000118,3.39e-08,22 | |||
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|short_description=p@chr11:70309509..70309517,+ | |||
}} | }} |
Latest revision as of 02:04, 24 July 2015
Short description: | p@chr11:70309509..70309517, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:70309509..70309517, + |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.60e-14 | 3 |
epithelial cell of lung | 2.46e-09 | 19 |
lymphocyte of B lineage | 1.15e-07 | 24 |
pro-B cell | 1.15e-07 | 24 |
germ line cell | 6.04e-07 | 7 |
germ cell | 6.04e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 4.66e-21 | 2 |
alveolar duct | 4.66e-21 | 2 |
bronchiole | 4.66e-21 | 2 |
pulmonary alveolus epithelium | 1.60e-14 | 3 |
alveolus | 1.60e-14 | 3 |
pulmonary lobule | 1.60e-14 | 3 |
lobule | 1.60e-14 | 3 |
alveolus of lung | 1.60e-14 | 3 |
alveolar system | 1.60e-14 | 3 |
pulmonary acinus | 1.60e-14 | 3 |
alveolar sac | 1.60e-14 | 3 |
alveolar wall | 1.60e-14 | 3 |
respiratory tract epithelium | 2.46e-09 | 19 |
lung epithelium | 2.46e-09 | 19 |
lung | 3.39e-08 | 22 |
respiratory tube | 3.39e-08 | 22 |
respiration organ | 3.39e-08 | 22 |
pair of lungs | 3.39e-08 | 22 |
lung primordium | 3.39e-08 | 22 |
lung bud | 3.39e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
anemia | 9.91e-41 | 1 |
non-small cell lung carcinoma | 2.34e-32 | 5 |
hematopoietic system disease | 3.81e-21 | 2 |
lung adenocarcinoma | 4.66e-21 | 2 |
lung carcinoma | 1.61e-18 | 9 |
lymphoma | 5.90e-17 | 10 |
lung large cell carcinoma | 2.09e-14 | 3 |
lung cancer | 1.50e-11 | 15 |
cardiovascular system disease | 2.80e-11 | 4 |
respiratory system cancer | 6.78e-11 | 16 |
bronchus cancer | 5.70e-07 | 7 |
bronchogenic carcinoma | 5.70e-07 | 7 |