FFCP PHASE1:Hg19::chr10:5060113..5060122,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100653286,1646 | |EntrezGene=100653286,1646 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=385 | |HGNC=385 | ||
|TSSclassifier=strong | |||
|UniProt=P52895 | |UniProt=P52895 | ||
|association_with_transcript=84bp_to_ENST00000407674,uc001ihs.2,uc001iht.2_5end | |||
|cluster_id=chr10:5060113..5060122,- | |||
|coexpression_cluster_id=C1585 | |||
|description=CAGE_peak_4_at_AKR1C2_5end | |||
|id=chr10:5060113..5060122,- | |||
|ontology_enrichment_celltype=CL:0000082!3.54e-13!19;CL:0002553!8.62e-12!1;CL:0000319!1.60e-11!1 | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.84e-34;1!CL:1000415;1.27e-17;2!CL:0000082;5.73e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.84e-34,1;CL:1000415,1.27e-17,2;CL:0000082,5.73e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0001041;3.42e-18;30!UBERON:0009497;3.38e-11;13 | |||
|ontology_enrichment_disease=DOID:0050615!3.02e-22!16;DOID:1324!1.04e-16!15;DOID:3030!1.60e-11!1;DOID:0050619!1.97e-11!1;DOID:1357!1.97e-11!1;DOID:2355!4.44e-11!1;DOID:305!7.26e-10!106;DOID:0050687!7.04e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1324;7.75e-10;15!DOID:0050615;2.77e-09;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,7.75e-10,15;DOID:0050615,2.77e-09,16;DOID:7,2.18e-08,39;DOID:305,3.15e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0002048!4.73e-16!22;UBERON:0000117!4.73e-16!22;UBERON:0000171!4.73e-16!22;UBERON:0000170!4.73e-16!22;UBERON:0005597!4.73e-16!22;UBERON:0000118!4.73e-16!22;UBERON:0004802!3.54e-13!19;UBERON:0000115!3.54e-13!19;UBERON:0001764!1.97e-11!1;UBERON:0001825!1.97e-11!1;UBERON:0002171!2.68e-11!1;UBERON:0006518!2.68e-11!1;UBERON:0008949!2.68e-11!1;UBERON:0000101!2.68e-11!1;UBERON:0002167!2.68e-11!1;UBERON:0005178!3.02e-10!34;UBERON:0002224!3.02e-10!34;UBERON:0005181!6.10e-10!35;UBERON:0005153!2.22e-09!37;UBERON:0008947!4.02e-09!38;UBERON:0003258!4.02e-09!38;UBERON:0004807!6.68e-09!28;UBERON:0005911!8.69e-09!82;UBERON:0001004!6.23e-08!72;UBERON:0002294!9.12e-07!7;UBERON:0001173!9.12e-07!7;UBERON:0004912!9.12e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;1.04e-19;7!UBERON:0001173;1.04e-19;7!UBERON:0002423;1.28e-12;25!UBERON:0002110;3.24e-12;3!UBERON:0002394;1.44e-09;4!UBERON:0003928;1.44e-09;4!UBERON:0004802;5.73e-08;19!UBERON:0000115;5.73e-08;19!UBERON:0002048;5.24e-07;22!UBERON:0004807;5.24e-07;22!UBERON:0000117;5.24e-07;22!UBERON:0000171;5.24e-07;22!UBERON:0000170;5.24e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002294,1.41e-15,9;UBERON:0001173,1.41e-15,9;UBERON:0004912,1.41e-15,9;UBERON:0009497,1.28e-12,25;UBERON:0000015,1.28e-12,25;UBERON:0002423,1.28e-12,25;UBERON:0006235,1.28e-12,25;UBERON:0004161,1.28e-12,25;UBERON:0002110,3.24e-12,3;UBERON:0006242,3.24e-12,3;UBERON:0005911,1.61e-10,82;UBERON:0005177,1.27e-08,101;UBERON:0004802,5.73e-08,19;UBERON:0000115,5.73e-08,19;UBERON:0009569,8.20e-08,112;UBERON:0002048,5.24e-07,22;UBERON:0000117,5.24e-07,22;UBERON:0000171,5.24e-07,22;UBERON:0000170,5.24e-07,22;UBERON:0005597,5.24e-07,22;UBERON:0008835,5.24e-07,22;UBERON:0000118,5.24e-07,22;UBERON:0003894,5.24e-07,22;UBERON:0002394,8.48e-07,6;UBERON:0003928,8.48e-07,6;UBERON:0009854,9.67e-07,23 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73735898684351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,5.9076987642951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12222348352147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.54746570693063,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,2.81926008926669,0,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0.628216385000937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4102734691385,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5647304101948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.73735898684351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,5.9076987642951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12222348352147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.54746570693063,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,2.81926008926669,0,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0.628216385000937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4102734691385,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5647304101948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@AKR1C2 | |||
}} | }} |
Latest revision as of 09:55, 18 September 2015
Short description: | p4@AKR1C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AKR1C2_5end |
Coexpression cluster: | C1585_nonsmall_hepatoma_mucinous_bile_lung_Adipocyte_mature |
Association with transcript: | 84bp_to_ENST00000407674, uc001ihs.2, uc001iht.2_5end |
EntrezGene: | 100653286,1646 |
HGNC: | 385 |
UniProt: | P52895 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.84e-34 | 1 |
epithelial cell of gall bladder | 1.27e-17 | 2 |
epithelial cell of lung | 5.73e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
biliary system | 1.41e-15 | 9 |
biliary tree | 1.41e-15 | 9 |
biliary bud | 1.41e-15 | 9 |
epithelium of foregut-midgut junction | 1.28e-12 | 25 |
anatomical boundary | 1.28e-12 | 25 |
hepatobiliary system | 1.28e-12 | 25 |
foregut-midgut junction | 1.28e-12 | 25 |
septum transversum | 1.28e-12 | 25 |
gallbladder | 3.24e-12 | 3 |
gall bladder primordium | 3.24e-12 | 3 |
endo-epithelium | 1.61e-10 | 82 |
trunk region element | 1.27e-08 | 101 |
respiratory tract epithelium | 5.73e-08 | 19 |
lung epithelium | 5.73e-08 | 19 |
subdivision of trunk | 8.20e-08 | 112 |
lung | 5.24e-07 | 22 |
respiratory tube | 5.24e-07 | 22 |
respiration organ | 5.24e-07 | 22 |
pair of lungs | 5.24e-07 | 22 |
lung primordium | 5.24e-07 | 22 |
hepatic diverticulum | 5.24e-07 | 22 |
lung bud | 5.24e-07 | 22 |
liver primordium | 5.24e-07 | 22 |
bile duct | 8.48e-07 | 6 |
digestive system duct | 8.48e-07 | 6 |
digestive tract diverticulum | 9.67e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 7.75e-10 | 15 |
respiratory system cancer | 2.77e-09 | 16 |
disease of anatomical entity | 2.18e-08 | 39 |
carcinoma | 3.15e-08 | 106 |