FFCP PHASE1:Hg19::chr12:106976774..106976788,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:106976774..106976788,+
|short_description=p1@RFX4
|description=CAGE_peak_1_at_RFX4_5end
|association_with_transcript=-22bp_to_ENST00000546882_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5992 | |EntrezGene=5992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9985 | |HGNC=9985 | ||
|TSSclassifier=strong | |||
|UniProt=F8W1T9 | |UniProt=F8W1T9 | ||
|association_with_transcript=-22bp_to_ENST00000546882_5end | |||
|cluster_id=chr12:106976774..106976788,+ | |||
|coexpression_cluster_id=C162 | |||
|description=CAGE_peak_1_at_RFX4_5end | |||
|id=chr12:106976774..106976788,+ | |||
|ontology_enrichment_celltype=CL:0002322!8.51e-10!5;CL:0000047!4.80e-09!8;CL:0000128!3.54e-07!7;CL:0000126!3.54e-07!7;CL:0000127!3.54e-07!7;CL:0002453!3.54e-07!7;CL:0002319!4.71e-07!25;CL:0002605!8.68e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000128;9.45e-09;7!CL:0000126;9.45e-09;7!CL:0000127;9.45e-09;7!CL:0002605;4.28e-08;3!CL:0002319;1.49e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,9.79e-09,7;CL:0000126,9.79e-09,7;CL:0000127,9.79e-09,7;CL:0002453,9.79e-09,7;CL:0002605,4.34e-08,3;CL:0000047,4.88e-08,8;CL:0002319,1.52e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.41e-22;82!UBERON:0006241;2.27e-10;3!UBERON:0003057;2.27e-10;3!UBERON:0006215;5.90e-09;3!UBERON:0010122;7.96e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@RFX4 | |||
}} | }} |
Latest revision as of 03:00, 16 September 2015
Short description: | p1@RFX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RFX4_5end |
Coexpression cluster: | C162_spinal_locus_medulla_substantia_thalamus_globus_diencephalon |
Association with transcript: | -22bp_to_ENST00000546882_5end |
EntrezGene: | RFX4 |
HGNC: | 9985 |
UniProt: | F8W1T9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 9.79e-09 | 7 |
macroglial cell | 9.79e-09 | 7 |
astrocyte | 9.79e-09 | 7 |
oligodendrocyte precursor cell | 9.79e-09 | 7 |
astrocyte of the cerebral cortex | 4.34e-08 | 3 |
neuronal stem cell | 4.88e-08 | 8 |
neural cell | 1.52e-07 | 25 |