FFCP PHASE1:Hg19::chr19:16830713..16830741,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284434 | |EntrezGene=284434 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27619 | |HGNC=27619 | ||
|TSSclassifier=strong | |||
|UniProt=C9J2Y8,E5RJJ1,Q149M9 | |UniProt=C9J2Y8,E5RJJ1,Q149M9 | ||
|association_with_transcript=-45bp_to_ENST00000420818,ENST00000518676,NM_001007525,uc002net.3,uc002neu.3_5end | |association_with_transcript=-45bp_to_ENST00000420818,ENST00000518676,NM_001007525,uc002net.3,uc002neu.3_5end | ||
|cluster_id=chr19:16830713..16830741,+ | |||
|coexpression_cluster_id=C160 | |||
|description=CAGE_peak_4_at_NWD1_5end | |description=CAGE_peak_4_at_NWD1_5end | ||
|id=chr19:16830713..16830741,+ | |id=chr19:16830713..16830741,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.69e-50!115;UBERON:0001049!1.44e-44!57;UBERON:0005068!1.44e-44!57;UBERON:0006241!1.44e-44!57;UBERON:0007135!1.44e-44!57;UBERON:0000955!1.03e-37!69;UBERON:0006238!1.03e-37!69;UBERON:0002616!1.05e-37!59;UBERON:0001017!9.54e-36!82;UBERON:0005743!1.48e-35!86;UBERON:0002780!5.12e-34!41;UBERON:0001890!5.12e-34!41;UBERON:0006240!5.12e-34!41;UBERON:0003080!5.18e-33!42;UBERON:0003075!1.23e-32!86;UBERON:0007284!1.23e-32!86;UBERON:0002346!2.57e-32!90;UBERON:0000073!5.53e-31!94;UBERON:0001016!5.53e-31!94;UBERON:0002020!3.26e-28!34;UBERON:0003528!3.26e-28!34;UBERON:0001893!3.58e-28!34;UBERON:0002791!1.19e-26!33;UBERON:0000153!1.34e-26!129;UBERON:0007811!1.34e-26!129;UBERON:0002619!3.89e-25!22;UBERON:0001869!4.10e-25!32;UBERON:0001950!1.44e-24!20;UBERON:0000033!2.04e-24!123;UBERON:0003056!1.04e-23!61;UBERON:0000956!1.30e-21!25;UBERON:0000203!1.30e-21!25;UBERON:0000924!5.83e-21!173;UBERON:0006601!5.83e-21!173;UBERON:0004121!9.36e-21!169;UBERON:0004111!7.28e-16!241;UBERON:0000025!3.59e-15!194;UBERON:0000477!1.66e-13!286;UBERON:0000483!3.36e-13!309;UBERON:0000119!6.59e-13!312;UBERON:0002298!2.04e-12!8;UBERON:0003076!2.30e-12!15;UBERON:0003057!2.30e-12!15;UBERON:0000475!3.76e-12!365;UBERON:0000200!4.70e-12!6;UBERON:0000062!7.38e-12!511;UBERON:0001872!1.98e-10!5;UBERON:0004733!3.44e-10!12;UBERON:0002028!3.44e-10!12;UBERON:0007277!3.44e-10!12;UBERON:0000922!1.91e-09!612;UBERON:0004732!2.80e-09!13;UBERON:0001871!3.07e-09!7;UBERON:0000481!9.57e-09!347;UBERON:0000923!1.24e-08!604;UBERON:0005291!1.24e-08!604;UBERON:0006598!1.24e-08!604;UBERON:0002532!1.24e-08!604;UBERON:0002050!1.40e-08!605;UBERON:0005423!1.40e-08!605;UBERON:0002420!4.29e-08!9;UBERON:0007245!4.29e-08!9;UBERON:0010009!4.29e-08!9;UBERON:0010011!4.29e-08!9;UBERON:0000454!4.29e-08!9;UBERON:0002308!5.14e-08!9;UBERON:0000125!5.14e-08!9;UBERON:0001896!6.24e-08!3;UBERON:0005290!6.24e-08!3;UBERON:0010096!6.24e-08!3;UBERON:0000064!9.35e-08!219;UBERON:0000468!1.17e-07!659;UBERON:0000349!1.19e-07!5;UBERON:0000467!1.28e-07!625;UBERON:0000480!1.43e-07!626;UBERON:0005153!3.31e-07!37;UBERON:0001894!3.32e-07!7;UBERON:0006222!3.32e-07!7;UBERON:0005157!5.52e-07!51;UBERON:0000988!7.62e-07!3;UBERON:0006331!9.49e-07!3;UBERON:0002771!9.49e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;8.10e-23;3!UBERON:0005290;8.10e-23;3!UBERON:0002298;1.04e-19;6!UBERON:0003127;1.50e-15;2!UBERON:0000073;2.65e-14;53!UBERON:0002616;2.65e-14;53!UBERON:0000349;1.14e-13;5!UBERON:0003528;1.01e-10;34!UBERON:0002020;1.01e-10;34!UBERON:0002780;1.57e-10;41!UBERON:0001890;1.57e-10;41!UBERON:0001893;4.24e-10;34!UBERON:0004733;6.10e-10;12!UBERON:0002028;6.10e-10;12!UBERON:0001871;9.83e-10;6!UBERON:0007023;2.49e-09;114!UBERON:0004732;3.48e-09;13!UBERON:0001017;4.69e-09;75!UBERON:0001301;6.74e-09;1!UBERON:0002336;8.45e-09;1!UBERON:0011215;8.45e-09;1!UBERON:0001018;8.45e-09;1!UBERON:0002473;8.45e-09;1!UBERON:0005340;8.45e-09;1!UBERON:0003544;8.45e-09;1!UBERON:0005970;8.45e-09;1!UBERON:0002316;8.45e-09;1!UBERON:0001020;8.45e-09;1!UBERON:0002437;8.45e-09;1!UBERON:0002791;1.73e-08;32!UBERON:0001869;1.73e-08;32!UBERON:0001882;2.29e-08;1!UBERON:0003112;2.29e-08;1!UBERON:0002171;2.29e-08;1!UBERON:0011158;2.29e-08;1!UBERON:0006518;2.29e-08;1!UBERON:0008949;2.29e-08;1!UBERON:0000101;2.29e-08;1!UBERON:0003128;2.29e-08;1!UBERON:0005403;2.29e-08;1!UBERON:0002167;2.29e-08;1!UBERON:0001703;2.29e-08;1!UBERON:0002241;2.29e-08;1!UBERON:0000369;5.82e-08;4!UBERON:0002435;5.82e-08;4!UBERON:0000204;5.82e-08;4!UBERON:0002420;1.13e-07;9!UBERON:0007245;1.13e-07;9!UBERON:0010009;1.13e-07;9!UBERON:0010011;1.13e-07;9!UBERON:0000454;1.13e-07;9!UBERON:0002619;1.26e-07;22!UBERON:0000125;1.42e-07;9!UBERON:0002308;1.42e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.57e-32,114;UBERON:0001896,6.06e-23,3;UBERON:0005290,6.06e-23,3;UBERON:0010096,6.06e-23,3;UBERON:0001049,5.61e-22,56;UBERON:0005068,5.61e-22,56;UBERON:0006241,5.61e-22,56;UBERON:0007135,5.61e-22,56;UBERON:0000073,5.03e-20,53;UBERON:0002616,5.03e-20,53;UBERON:0002298,9.06e-20,6;UBERON:0003075,1.34e-16,82;UBERON:0007284,1.34e-16,82;UBERON:0001017,1.50e-16,81;UBERON:0003127,8.04e-16,2;UBERON:0002346,1.05e-15,86;UBERON:0000955,6.76e-15,68;UBERON:0006238,6.76e-15,68;UBERON:0001016,1.19e-14,89;UBERON:0000349,1.27e-13,5;UBERON:0010371,1.60e-12,104;UBERON:0002780,2.27e-12,41;UBERON:0001890,2.27e-12,41;UBERON:0003080,2.27e-12,41;UBERON:0006240,2.27e-12,41;UBERON:0003076,5.51e-12,15;UBERON:0003057,5.51e-12,15;UBERON:0001893,6.67e-12,34;UBERON:0003528,8.26e-12,34;UBERON:0002020,8.26e-12,34;UBERON:0011216,3.45e-11,223;UBERON:0010314,1.03e-10,132;UBERON:0004733,5.70e-10,12;UBERON:0002028,5.70e-10,12;UBERON:0007277,5.70e-10,12;UBERON:0003056,6.88e-10,61;UBERON:0000025,8.59e-10,192;UBERON:0002791,1.05e-09,32;UBERON:0001869,1.05e-09,32;UBERON:0001871,1.21e-09,6;UBERON:0004732,3.26e-09,13;UBERON:0001301,7.01e-09,1;UBERON:0002336,8.78e-09,1;UBERON:0011215,8.78e-09,1;UBERON:0001018,8.78e-09,1;UBERON:0002473,8.78e-09,1;UBERON:0005340,8.78e-09,1;UBERON:0003544,8.78e-09,1;UBERON:0005970,8.78e-09,1;UBERON:0002316,8.78e-09,1;UBERON:0001020,8.78e-09,1;UBERON:0002437,8.78e-09,1;UBERON:0002171,2.64e-08,1;UBERON:0006518,2.64e-08,1;UBERON:0008949,2.64e-08,1;UBERON:0000101,2.64e-08,1;UBERON:0002167,2.64e-08,1;UBERON:0001882,2.84e-08,1;UBERON:0005403,2.84e-08,1;UBERON:0003112,3.06e-08,1;UBERON:0011158,3.06e-08,1;UBERON:0003128,3.06e-08,1;UBERON:0001703,3.06e-08,1;UBERON:0002241,3.06e-08,1;UBERON:0004761,3.06e-08,1;UBERON:0009617,3.06e-08,1;UBERON:0004111,4.36e-08,240;UBERON:0000369,5.43e-08,4;UBERON:0002435,5.43e-08,4;UBERON:0000204,5.43e-08,4;UBERON:0010082,5.43e-08,4;UBERON:0002420,1.08e-07,9;UBERON:0007245,1.08e-07,9;UBERON:0010009,1.08e-07,9;UBERON:0010011,1.08e-07,9;UBERON:0000454,1.08e-07,9;UBERON:0000125,1.39e-07,9;UBERON:0002308,1.39e-07,9;UBERON:0002619,1.51e-07,22;UBERON:0004121,1.69e-07,171;UBERON:0000924,1.69e-07,171;UBERON:0006601,1.69e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,2.2507106625682,0,0,0,1.9924798825107,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,1.80894657938112,0,0.331737779793674,0.295547618953547,1.97446857438575,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50485891499521,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.970722711091971,0.520679215005393,0,0.0870592065804026,4.01871336956669,0.171986032471617,0.0967563312890851,0,0.164230914106418,0,0,1.12990370390266,0,0,0.316553979779393,0.195551382734803,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81369537112412,0,0,0,0,0,0.668245123238271,0,0,0.0524545881349981,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,1.29282956361551,0.92562821219883,0,0.704815022316672,1.38823636338003,2.35806457649499,1.24271716604159,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.751145584238999,13.1884115008716,6.43388498913743,1.73869928235874,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,1.15612605173627,0,1.11743701340006,0,0.252071696221718,0.553258019713743,1.13032951942296,0,0,0,0,0,0,0,0,0.225630985047772,0,1.56302802246618,0,0,0,0.540300676947157,0.781078098613847,0.826747186004736,0.634158101939068,0.546974809018219,0,0,0,0.255524855279191,0.535701835878287,0.672567444437648,0,0,0,0,0.171488009437418,0.203909198930495,0.789273282754189,0,0.333694205676207,1.02041020705668,0.785577949580009,0,0,0,0,3.85973338553944,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994753875806841,0,0,0,0.150962843566674,0,0,0,0,0,0.588925401344836,1.48523200163543,0,0,0,0,0,0,0,0.401206833445841,0,0,0.143339583151451,0,1.35982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,3.31667775783512,0.724030971033267,0.852935927603924,2.14257988317366,0,0.0620747142958579,0,0.12729431655633,0.808468755832877,0,0.342233301085281,0.336760265072938,4.94883217209467,1.99596213927608,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0.290633938513962,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,2.2507106625682,0,0,0,1.9924798825107,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,1.80894657938112,0,0.331737779793674,0.295547618953547,1.97446857438575,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50485891499521,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.970722711091971,0.520679215005393,0,0.0870592065804026,4.01871336956669,0.171986032471617,0.0967563312890851,0,0.164230914106418,0,0,1.12990370390266,0,0,0.316553979779393,0.195551382734803,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81369537112412,0,0,0,0,0,0.668245123238271,0,0,0.0524545881349981,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,1.29282956361551,0.92562821219883,0,0.704815022316672,1.38823636338003,2.35806457649499,1.24271716604159,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.751145584238999,13.1884115008716,6.43388498913743,1.73869928235874,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10606748921385,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,1.15612605173627,0,1.11743701340006,0,0.252071696221718,0.553258019713743,1.13032951942296,0,0,0,0,0,0,0,0,0.225630985047772,0,1.56302802246618,0,0,0,0.540300676947157,0.781078098613847,0.826747186004736,0.634158101939068,0.546974809018219,0,0,0,0.255524855279191,0.535701835878287,0.672567444437648,0,0,0,0,0.171488009437418,0.203909198930495,0.789273282754189,0,0.333694205676207,1.02041020705668,0.785577949580009,0,0,0,0,3.85973338553944,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994753875806841,0,0,0,0.150962843566674,0,0,0,0,0,0.588925401344836,1.48523200163543,0,0,0,0,0,0,0,0.401206833445841,0,0,0.143339583151451,0,1.35982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,3.31667775783512,0.724030971033267,0.852935927603924,2.14257988317366,0,0.0620747142958579,0,0.12729431655633,0.808468755832877,0,0.342233301085281,0.336760265072938,4.94883217209467,1.99596213927608,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0,0 | ||
|short_description=p4@NWD1 | |short_description=p4@NWD1 | ||
}} | }} |
Latest revision as of 10:35, 16 September 2015
Short description: | p4@NWD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NWD1_5end |
Coexpression cluster: | C160_medulla_Hepatocyte_retina_corpus_liver_pineal_cerebral |
Association with transcript: | -45bp_to_ENST00000420818, ENST00000518676, NM_001007525, uc002net.3, uc002neu.3_5end |
EntrezGene: | NWD1 |
HGNC: | 27619 |
UniProt: | C9J2Y8E5RJJ1Q149M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data