FFCP PHASE1:Hg19::chr3:176765178..176765190,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:176765178..176765190,- | |||
|description=CAGE_peak_at_chr3:176765178..176765190,- | |description=CAGE_peak_at_chr3:176765178..176765190,- | ||
|id=chr3:176765178..176765190,- | |id=chr3:176765178..176765190,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002564;2.95e-21;3!CL:0002195;5.93e-09;2!CL:0002571;5.93e-09;2!CL:0002617;5.93e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,4.02e-21,3;CL:0002617,6.42e-09,2;CL:0002195,6.94e-09,2;CL:0002571,6.94e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002242;2.95e-21;3!UBERON:0011135;3.65e-13;5!UBERON:0002216;3.65e-13;5!UBERON:0011134;3.65e-13;5!UBERON:0002209;3.65e-13;5!UBERON:0002213;3.65e-13;5!UBERON:0007844;3.65e-13;5!UBERON:0011138;3.65e-13;5!UBERON:0001130;3.65e-13;5!UBERON:0001066;3.65e-13;5!UBERON:0001468;3.65e-13;5!UBERON:0002771;5.93e-09;2!UBERON:0004905;1.42e-08;8!UBERON:0000982;1.42e-08;8!UBERON:0004770;1.42e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002242,4.02e-21,3;UBERON:0003068,4.02e-21,3;UBERON:0002328,4.02e-21,3;UBERON:0004880,4.02e-21,3;UBERON:0011135,4.39e-13,5;UBERON:0002216,4.39e-13,5;UBERON:0011134,4.39e-13,5;UBERON:0002209,4.39e-13,5;UBERON:0002213,4.39e-13,5;UBERON:0005856,4.39e-13,5;UBERON:0005866,4.39e-13,5;UBERON:0005863,4.39e-13,5;UBERON:0007844,4.39e-13,5;UBERON:0011138,4.39e-13,5;UBERON:0001130,4.39e-13,5;UBERON:0001066,4.39e-13,5;UBERON:0001468,4.39e-13,5;UBERON:0002771,4.02e-09,2;UBERON:0004905,1.59e-08,8;UBERON:0000982,1.59e-08,8;UBERON:0004770,1.59e-08,8 | |||
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| ||
|short_description=p@chr3:176765178..176765190,- | |short_description=p@chr3:176765178..176765190,- | ||
}} | }} |
Latest revision as of 18:23, 29 July 2015
Short description: | p@chr3:176765178..176765190, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:176765178..176765190, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 4.02e-21 | 3 |
adipocyte of breast | 6.42e-09 | 2 |
hepatic stem cell | 6.94e-09 | 2 |
hepatic mesenchymal stem cell | 6.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
nucleus pulposus | 4.02e-21 | 3 |
axial mesoderm | 4.02e-21 | 3 |
notochord | 4.02e-21 | 3 |
chordamesoderm | 4.02e-21 | 3 |
intervertebral cartilage | 4.39e-13 | 5 |
symphysis | 4.39e-13 | 5 |
nonsynovial joint | 4.39e-13 | 5 |
fibrous joint | 4.39e-13 | 5 |
cartilaginous joint | 4.39e-13 | 5 |
developing mesenchymal condensation | 4.39e-13 | 5 |
pre-cartilage condensation | 4.39e-13 | 5 |
cartilaginous condensation | 4.39e-13 | 5 |
cartilage element | 4.39e-13 | 5 |
post-cranial axial skeletal system | 4.39e-13 | 5 |
vertebral column | 4.39e-13 | 5 |
intervertebral disk | 4.39e-13 | 5 |
intervertebral joint | 4.39e-13 | 5 |
middle temporal gyrus | 4.02e-09 | 2 |
articulation | 1.59e-08 | 8 |
skeletal joint | 1.59e-08 | 8 |
articular system | 1.59e-08 | 8 |