FFCP PHASE1:Hg19::chr3:239567..239577,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10752 | |EntrezGene=10752 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1939 | |HGNC=1939 | ||
|TSSclassifier=strong | |||
|UniProt=C9J905 | |UniProt=C9J905 | ||
|association_with_transcript=-112bp_to_ENST00000435603_5end | |association_with_transcript=-112bp_to_ENST00000435603_5end | ||
|cluster_id=chr3:239567..239577,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_8_at_CHL1_5end | |description=CAGE_peak_8_at_CHL1_5end | ||
|id=chr3:239567..239577,+ | |id=chr3:239567..239577,+ | ||
|ontology_enrichment_celltype=CL:0000047!3.56e-07!8 | |ontology_enrichment_celltype=CL:0000047!3.56e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.28e-07;6!CL:0000404;1.28e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.83e-10,8;CL:0000540,9.43e-08,6;CL:0000031,9.43e-08,6;CL:0000404,9.43e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.08e-10;82!CL:0000031;1.28e-07;6!UBERON:0006241;7.12e-07;3!UBERON:0006215;7.12e-07;3!UBERON:0003057;7.12e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.33e-69!57;UBERON:0005068!6.33e-69!57;UBERON:0006241!6.33e-69!57;UBERON:0007135!6.33e-69!57;UBERON:0001017!5.20e-66!82;UBERON:0005743!9.10e-65!86;UBERON:0000073!1.91e-59!94;UBERON:0001016!1.91e-59!94;UBERON:0007023!2.97e-58!115;UBERON:0002616!8.09e-57!59;UBERON:0002780!6.79e-56!41;UBERON:0001890!6.79e-56!41;UBERON:0006240!6.79e-56!41;UBERON:0003080!2.50e-54!42;UBERON:0003075!8.94e-54!86;UBERON:0007284!8.94e-54!86;UBERON:0000955!2.62e-51!69;UBERON:0006238!2.62e-51!69;UBERON:0002346!1.02e-50!90;UBERON:0002020!1.75e-50!34;UBERON:0003528!1.75e-50!34;UBERON:0001893!1.88e-50!34;UBERON:0002791!2.63e-48!33;UBERON:0001869!4.54e-47!32;UBERON:0002619!4.63e-43!22;UBERON:0001950!2.55e-39!20;UBERON:0003056!1.76e-38!61;UBERON:0000956!2.92e-37!25;UBERON:0000203!2.92e-37!25;UBERON:0004121!2.53e-32!169;UBERON:0000924!3.44e-31!173;UBERON:0006601!3.44e-31!173;UBERON:0000033!4.14e-30!123;UBERON:0000153!2.17e-29!129;UBERON:0007811!2.17e-29!129;UBERON:0001871!9.59e-18!7;UBERON:0000025!2.30e-17!194;UBERON:0003076!3.44e-15!15;UBERON:0003057!3.44e-15!15;UBERON:0002308!2.03e-14!9;UBERON:0002420!2.03e-14!9;UBERON:0000125!2.03e-14!9;UBERON:0007245!2.03e-14!9;UBERON:0010009!2.03e-14!9;UBERON:0010011!2.03e-14!9;UBERON:0000454!2.03e-14!9;UBERON:0004111!4.95e-14!241;UBERON:0000064!8.49e-13!219;UBERON:0000477!4.99e-12!286;UBERON:0001872!9.37e-12!5;UBERON:0002021!1.99e-11!5;UBERON:0000349!3.05e-11!5;UBERON:0009663!1.25e-10!7;UBERON:0004733!3.15e-10!12;UBERON:0002028!3.15e-10!12;UBERON:0007277!3.15e-10!12;UBERON:0000475!6.71e-10!365;UBERON:0000200!8.14e-10!6;UBERON:0000369!1.71e-09!4;UBERON:0002435!1.71e-09!4;UBERON:0000204!1.71e-09!4;UBERON:0010082!1.71e-09!4;UBERON:0000483!2.17e-09!309;UBERON:0004732!2.55e-09!13;UBERON:0002298!3.41e-09!8;UBERON:0000119!3.68e-09!312;UBERON:0000481!1.31e-08!347;UBERON:0002680!3.87e-08!9;UBERON:0001895!3.87e-08!9;UBERON:0010092!3.87e-08!9;UBERON:0002771!7.25e-08!3;UBERON:0000988!1.78e-07!3;UBERON:0005383!1.78e-07!3;UBERON:0005382!1.78e-07!3;UBERON:0000062!2.21e-07!511;UBERON:0002240!3.03e-07!3;UBERON:0001894!3.98e-07!7;UBERON:0006222!3.98e-07!7;UBERON:0006331!4.16e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.06e-76;22!UBERON:0001950;2.22e-75;20!UBERON:0000956;1.42e-66;25!UBERON:0000203;1.42e-66;25!UBERON:0001869;2.43e-66;32!UBERON:0003528;3.53e-64;34!UBERON:0002020;3.53e-64;34!UBERON:0002791;2.77e-61;32!UBERON:0001893;1.18e-60;34!UBERON:0002780;2.19e-44;41!UBERON:0001890;2.19e-44;41!UBERON:0000073;1.18e-36;53!UBERON:0002616;1.18e-36;53!UBERON:0001017;1.38e-27;75!UBERON:0001016;4.17e-25;83!UBERON:0000955;7.63e-25;68!UBERON:0001871;1.43e-23;6!UBERON:0001872;2.41e-23;5!UBERON:0002021;9.38e-23;5!UBERON:0000200;2.02e-19;6!UBERON:0000988;5.36e-14;3!UBERON:0000125;1.95e-12;9!UBERON:0002308;1.95e-12;9!UBERON:0002680;3.19e-12;9!UBERON:0001895;3.19e-12;9!UBERON:0011216;3.71e-12;132!UBERON:0000369;6.41e-11;4!UBERON:0002435;6.41e-11;4!UBERON:0000204;6.41e-11;4!UBERON:0002771;2.65e-10;2!UBERON:0002148;6.67e-10;2!UBERON:0006331;6.67e-10;2!UBERON:0009662;6.67e-10;2!UBERON:0004733;4.16e-09;12!UBERON:0002028;4.16e-09;12!UBERON:0007023;4.57e-09;114!UBERON:0000349;7.95e-09;5!UBERON:0002420;1.92e-08;9!UBERON:0007245;1.92e-08;9!UBERON:0010009;1.92e-08;9!UBERON:0010011;1.92e-08;9!UBERON:0000454;1.92e-08;9!UBERON:0004732;2.18e-08;13!UBERON:0001870;2.08e-07;3!UBERON:0002298;3.12e-07;6!UBERON:0005383;3.88e-07;3!UBERON:0005382;3.88e-07;3!UBERON:0002240;7.12e-07;3!UBERON:0005174;7.12e-07;3!UBERON:0001137;7.12e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.58e-77,81;UBERON:0003528,2.68e-76,34;UBERON:0002020,2.68e-76,34;UBERON:0002619,2.65e-75,22;UBERON:0001049,3.14e-75,56;UBERON:0005068,3.14e-75,56;UBERON:0006241,3.14e-75,56;UBERON:0007135,3.14e-75,56;UBERON:0001869,4.69e-75,32;UBERON:0001950,8.98e-75,20;UBERON:0001893,1.92e-70,34;UBERON:0000073,9.27e-70,53;UBERON:0002616,9.27e-70,53;UBERON:0001016,1.43e-68,89;UBERON:0002791,1.85e-68,32;UBERON:0000956,4.56e-66,25;UBERON:0000203,4.56e-66,25;UBERON:0002780,7.42e-63,41;UBERON:0001890,7.42e-63,41;UBERON:0003080,7.42e-63,41;UBERON:0006240,7.42e-63,41;UBERON:0000955,2.30e-60,68;UBERON:0006238,2.30e-60,68;UBERON:0003075,1.86e-49,82;UBERON:0007284,1.86e-49,82;UBERON:0002346,7.38e-47,86;UBERON:0003056,1.10e-40,61;UBERON:0010371,1.30e-37,104;UBERON:0004121,1.46e-32,171;UBERON:0000924,1.46e-32,171;UBERON:0006601,1.46e-32,171;UBERON:0010314,2.21e-30,132;UBERON:0011216,1.26e-29,223;UBERON:0007023,5.13e-27,114;UBERON:0001871,1.21e-23,6;UBERON:0001872,3.60e-23,5;UBERON:0002021,1.79e-22,5;UBERON:0000200,1.59e-19,6;UBERON:0000025,1.43e-18,192;UBERON:0000988,4.20e-14,3;UBERON:0003076,1.11e-13,15;UBERON:0003057,1.11e-13,15;UBERON:0004111,1.95e-13,240;UBERON:0000125,1.21e-12,9;UBERON:0002308,1.21e-12,9;UBERON:0002680,2.94e-12,9;UBERON:0001895,2.94e-12,9;UBERON:0010092,2.94e-12,9;UBERON:0000369,4.05e-11,4;UBERON:0002435,4.05e-11,4;UBERON:0000204,4.05e-11,4;UBERON:0010082,4.05e-11,4;UBERON:0002771,1.92e-10,2;UBERON:0002148,5.09e-10,2;UBERON:0006331,5.09e-10,2;UBERON:0009662,5.09e-10,2;UBERON:0004733,3.92e-09,12;UBERON:0002028,3.92e-09,12;UBERON:0007277,3.92e-09,12;UBERON:0000483,5.18e-09,306;UBERON:0000349,6.00e-09,5;UBERON:0000119,7.41e-09,309;UBERON:0002420,1.46e-08,9;UBERON:0007245,1.46e-08,9;UBERON:0010009,1.46e-08,9;UBERON:0010011,1.46e-08,9;UBERON:0000454,1.46e-08,9;UBERON:0004732,2.07e-08,13;UBERON:0000923,1.32e-07,560;UBERON:0010316,1.32e-07,560;UBERON:0005291,1.32e-07,560;UBERON:0006598,1.32e-07,560;UBERON:0010317,1.32e-07,560;UBERON:0002532,1.32e-07,560;UBERON:0002050,1.73e-07,564;UBERON:0001870,2.29e-07,3;UBERON:0002298,2.77e-07,6;UBERON:0005383,3.44e-07,3;UBERON:0005382,3.44e-07,3;UBERON:0005423,5.11e-07,581;UBERON:0002240,7.81e-07,3;UBERON:0005174,7.81e-07,3;UBERON:0001137,7.81e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.61130724598361,0.164201178899891,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,3.90419561572865,2.31986643833309,2.84777651068393,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,2.53204949538923,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,0,0,0,1.94813006139888,5.98841394003583,0,0,0,0,0,0,0,0,0,0.885741385813839,2.17073589525734,0,1.3269511191747,1.77328571372128,1.31631238292384,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.67401132980677,0,0.937057782901357,0,0,0,0,1.20990716048664,4.28501866282686,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,2.46912104227927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.338693328263138,0.795229689809303,1.63444087333891,0,0,0,0,0,1.15424157650247,0,0.0788057072991982,0.157363764404994,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,1.85125642439766,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.785270481251171,0,1.70836770862748,2.50381861413,0,0.998361463831671,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76516872303461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,1.86264752779733,1.41696576325585,1.75597244962866,1.23069818544453,9.07458106398185,1.45230230174858,2.58361033010962,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,2.76904096935418,1.56215619722769,2.48024155801421,2.34638497717455,2.7348740450911,0,0.992422356778588,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,1.63127359144396,1.38122824481983,0,0,0.156986185701028,1.88538707899202,0,1.82631744101899,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,1.1294608203896,0,0.301925687133347,0.154348316215889,0.218559560503957,0,0,0,0.981542335574726,1.78227840196252,1.2679671827502,0,0,0,0.199882311849858,0,0,0,0,0,0.286679166302903,0,1.8357702351547,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,1.65833887891756,0.620597975171371,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0.573777643141411,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,2.53299878168311,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.61130724598361,0.164201178899891,0.314843125254717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,3.90419561572865,2.31986643833309,2.84777651068393,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,2.53204949538923,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,0,0,0,1.94813006139888,5.98841394003583,0,0,0,0,0,0,0,0,0,0.885741385813839,2.17073589525734,0,1.3269511191747,1.77328571372128,1.31631238292384,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.67401132980677,0,0.937057782901357,0,0,0,0,1.20990716048664,4.28501866282686,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,2.46912104227927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.338693328263138,0.795229689809303,1.63444087333891,0,0,0,0,0,1.15424157650247,0,0.0788057072991982,0.157363764404994,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55139547633861,1.85125642439766,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.785270481251171,0,1.70836770862748,2.50381861413,0,0.998361463831671,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76516872303461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314531883711793,0,0,0,0,0,0,0,0,0,0,1.86264752779733,1.41696576325585,1.75597244962866,1.23069818544453,9.07458106398185,1.45230230174858,2.58361033010962,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,2.76904096935418,1.56215619722769,2.48024155801421,2.34638497717455,2.7348740450911,0,0.992422356778588,0,0,0,0.336283722218824,0,0.227662191351298,0,0,0,1.63127359144396,1.38122824481983,0,0,0.156986185701028,1.88538707899202,0,1.82631744101899,0,0,0.428859265059938,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,1.1294608203896,0,0.301925687133347,0.154348316215889,0.218559560503957,0,0,0,0.981542335574726,1.78227840196252,1.2679671827502,0,0,0,0.199882311849858,0,0,0,0,0,0.286679166302903,0,1.8357702351547,2.18175345170189,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,1.65833887891756,0.620597975171371,0.213233981900981,0,0,0,0,0,0,0.217716747896961,0,0,0.573777643141411,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p8@CHL1 | |short_description=p8@CHL1 | ||
}} | }} |
Latest revision as of 19:46, 17 September 2015
Short description: | p8@CHL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CHL1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -112bp_to_ENST00000435603_5end |
EntrezGene: | CHL1 |
HGNC: | 1939 |
UniProt: | C9J905 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.83e-10 | 8 |
neuron | 9.43e-08 | 6 |
neuroblast | 9.43e-08 | 6 |
electrically signaling cell | 9.43e-08 | 6 |