FFCP PHASE1:Hg19::chr19:7854634..7854677,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:7854634..7854677,+ | |||
|coexpression_cluster_id=C84 | |||
|description=CAGE_peak_at_chr19:7854634..7854677,+ | |description=CAGE_peak_at_chr19:7854634..7854677,+ | ||
|id=chr19:7854634..7854677,+ | |id=chr19:7854634..7854677,+ | ||
|ontology_enrichment_celltype=CL:0002322!4.47e-21!5;CL:0000167!7.45e-08!1;CL:0000164!7.45e-08!1;CL:0000502!7.45e-08!1;CL:0000172!7.45e-08!1;CL:0000173!7.45e-08!1;CL:0002351!7.45e-08!1 | |ontology_enrichment_celltype=CL:0002322!4.47e-21!5;CL:0000167!7.45e-08!1;CL:0000164!7.45e-08!1;CL:0000502!7.45e-08!1;CL:0000172!7.45e-08!1;CL:0000173!7.45e-08!1;CL:0002351!7.45e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000039;8.16e-11;7!CL:0000586;8.16e-11;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,8.16e-11,7;CL:0000586,8.16e-11,7 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.75e-130;2!UBERON:0005754;4.66e-66;1!UBERON:0003918;6.56e-08;10!UBERON:0007687;6.56e-08;10 | |||
|ontology_enrichment_disease=DOID:4430!7.45e-08!1 | |ontology_enrichment_disease=DOID:4430!7.45e-08!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!3.11e-21!3;UBERON:0004054!3.11e-21!3;UBERON:0005904!4.56e-16!4;UBERON:0003135!6.21e-10!11;UBERON:0007023!9.50e-10!115;UBERON:0001301!2.89e-08!1;UBERON:0000998!3.10e-08!1;UBERON:0006868!3.10e-08!1;UBERON:0001000!3.55e-08!1;UBERON:0005352!3.55e-08!1;UBERON:0000029!4.66e-08!1;UBERON:0001736!4.99e-08!1;UBERON:0006298!4.99e-08!1;UBERON:0003101!2.09e-07!22;UBERON:0000079!2.09e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.52e-87;3!UBERON:0004054;1.52e-87;3!UBERON:0001301;2.39e-66;1!UBERON:0000998;4.66e-66;1!UBERON:0006868;4.66e-66;1!UBERON:0005904;4.67e-66;4!UBERON:0000058;2.72e-27;10!UBERON:0003135;6.20e-25;11!UBERON:0004175;1.16e-13;21!UBERON:0003101;4.26e-13;22!UBERON:0000079;4.26e-13;22!UBERON:0000473;1.47e-09;8!UBERON:0003937;8.38e-07;12!UBERON:0005399;8.38e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.52e-87,3;UBERON:0004054,1.52e-87,3;UBERON:0001301,2.39e-66,1;UBERON:0000998,4.66e-66,1;UBERON:0006868,4.66e-66,1;UBERON:0005904,4.67e-66,4;UBERON:0000080,3.59e-30,9;UBERON:0002120,3.59e-30,9;UBERON:0004875,3.59e-30,9;UBERON:0005721,3.59e-30,9;UBERON:0005754,3.59e-30,9;UBERON:0007297,3.59e-30,9;UBERON:0003135,6.20e-25,11;UBERON:0004876,6.20e-25,11;UBERON:0003887,5.74e-23,12;UBERON:0000058,5.66e-15,19;UBERON:0003101,4.26e-13,22;UBERON:0000079,4.26e-13,22;UBERON:0004175,1.15e-11,25;UBERON:0002113,2.91e-11,26;UBERON:0003918,2.91e-11,26;UBERON:0011143,2.91e-11,26;UBERON:0005095,2.91e-11,26;UBERON:0007687,2.91e-11,26;UBERON:0003064,1.54e-10,28;UBERON:0000489,1.25e-09,31;UBERON:0005103,1.35e-09,8;UBERON:0000083,1.35e-09,8;UBERON:0009201,1.35e-09,8;UBERON:0006553,1.35e-09,8;UBERON:0003074,1.35e-09,8;UBERON:0003060,1.35e-09,8;UBERON:0000473,1.47e-09,8;UBERON:0003937,8.38e-07,12;UBERON:0005399,8.38e-07,12 | |||
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|short_description=p@chr19:7854634..7854677,+ | |short_description=p@chr19:7854634..7854677,+ | ||
}} | }} |
Latest revision as of 18:32, 27 July 2015
Short description: | p@chr19:7854634..7854677, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:7854634..7854677, + |
Coexpression cluster: | C84_choriocarcinoma_pancreatic_Wilms_Mallassezderived_thymus_salivary_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 8.16e-11 | 7 |
germ cell | 8.16e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.52e-87 | 3 |
internal male genitalia | 1.52e-87 | 3 |
epididymis | 2.39e-66 | 1 |
seminal vesicle | 4.66e-66 | 1 |
seminal fluid secreting gland | 4.66e-66 | 1 |
duct of male reproductive system | 4.67e-66 | 4 |
mesonephros | 3.59e-30 | 9 |
pronephros | 3.59e-30 | 9 |
nephrogenic cord | 3.59e-30 | 9 |
pronephric mesoderm | 3.59e-30 | 9 |
rostral part of nephrogenic cord | 3.59e-30 | 9 |
presumptive pronephric mesoderm | 3.59e-30 | 9 |
male reproductive organ | 6.20e-25 | 11 |
urogenital ridge | 6.20e-25 | 11 |
intraembryonic coelom | 5.74e-23 | 12 |
duct | 5.66e-15 | 19 |
male organism | 4.26e-13 | 22 |
male reproductive system | 4.26e-13 | 22 |
internal genitalia | 1.15e-11 | 25 |
kidney | 2.91e-11 | 26 |
kidney mesenchyme | 2.91e-11 | 26 |
upper urinary tract | 2.91e-11 | 26 |
kidney rudiment | 2.91e-11 | 26 |
kidney field | 2.91e-11 | 26 |
intermediate mesoderm | 1.54e-10 | 28 |
cavitated compound organ | 1.25e-09 | 31 |
mesonephric epithelium | 1.35e-09 | 8 |
mesonephric tubule | 1.35e-09 | 8 |
nephric duct | 1.35e-09 | 8 |
renal duct | 1.35e-09 | 8 |
mesonephric duct | 1.35e-09 | 8 |
pronephric duct | 1.35e-09 | 8 |
testis | 1.47e-09 | 8 |
sex gland | 8.38e-07 | 12 |
male reproductive gland | 8.38e-07 | 12 |