FFCP PHASE1:Hg19::chr1:156611940..156611959,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63827 | |EntrezGene=63827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23059 | |HGNC=23059 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000479949_5end | |association_with_transcript=16bp_to_ENST00000479949_5end | ||
|cluster_id=chr1:156611940..156611959,+ | |||
|coexpression_cluster_id=C1816 | |||
|description=CAGE_peak_2_at_BCAN_5end | |description=CAGE_peak_2_at_BCAN_5end | ||
|id=chr1:156611940..156611959,+ | |id=chr1:156611940..156611959,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.06e-11!10;CL:0000541!1.06e-11!10;CL:0000147!1.02e-07!14 | |ontology_enrichment_celltype=CL:0000148!1.06e-11!10;CL:0000541!1.06e-11!10;CL:0000147!1.02e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000148;4.76e-12;10!CL:0000147;2.84e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,5.02e-12,10;CL:0000541,5.02e-12,10;CL:0000147,2.94e-08,14;CL:0000047,1.54e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.83e-20;82!UBERON:0006241;2.29e-08;3!UBERON:0003057;2.29e-08;3!UBERON:0006215;9.37e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.42e-63!57;UBERON:0005068!2.42e-63!57;UBERON:0006241!2.42e-63!57;UBERON:0007135!2.42e-63!57;UBERON:0001017!1.04e-60!82;UBERON:0005743!4.33e-59!86;UBERON:0000073!1.96e-57!94;UBERON:0001016!1.96e-57!94;UBERON:0002616!1.27e-52!59;UBERON:0002780!2.72e-50!41;UBERON:0001890!2.72e-50!41;UBERON:0006240!2.72e-50!41;UBERON:0003080!8.80e-49!42;UBERON:0000955!1.57e-48!69;UBERON:0006238!1.57e-48!69;UBERON:0003075!1.17e-44!86;UBERON:0007284!1.17e-44!86;UBERON:0001893!4.07e-44!34;UBERON:0002020!7.68e-44!34;UBERON:0003528!7.68e-44!34;UBERON:0007023!8.77e-44!115;UBERON:0002791!1.04e-42!33;UBERON:0002346!8.00e-42!90;UBERON:0001869!3.19e-41!32;UBERON:0003056!5.86e-33!61;UBERON:0004121!6.41e-32!169;UBERON:0000956!2.61e-31!25;UBERON:0000203!2.61e-31!25;UBERON:0002619!4.41e-31!22;UBERON:0000924!1.19e-30!173;UBERON:0006601!1.19e-30!173;UBERON:0001950!3.35e-28!20;UBERON:0000033!1.33e-27!123;UBERON:0000153!1.51e-27!129;UBERON:0007811!1.51e-27!129;UBERON:0003076!4.24e-15!15;UBERON:0003057!4.24e-15!15;UBERON:0002420!2.99e-14!9;UBERON:0007245!2.99e-14!9;UBERON:0010009!2.99e-14!9;UBERON:0010011!2.99e-14!9;UBERON:0000454!2.99e-14!9;UBERON:0002308!7.46e-14!9;UBERON:0000125!7.46e-14!9;UBERON:0004732!1.50e-12!13;UBERON:0009663!2.79e-11!7;UBERON:0004733!3.23e-11!12;UBERON:0002028!3.23e-11!12;UBERON:0007277!3.23e-11!12;UBERON:0000025!6.17e-11!194;UBERON:0001871!3.78e-10!7;UBERON:0000200!8.68e-10!6;UBERON:0002298!3.19e-09!8;UBERON:0004111!4.94e-09!241;UBERON:0000349!6.56e-09!5;UBERON:0002021!1.05e-08!5;UBERON:0001872!1.47e-08!5;UBERON:0000064!5.99e-08!219;UBERON:0001894!1.37e-07!7;UBERON:0006222!1.37e-07!7;UBERON:0002680!1.55e-07!9;UBERON:0001895!1.55e-07!9;UBERON:0010092!1.55e-07!9;UBERON:0000477!1.88e-07!286;UBERON:0000369!2.52e-07!4;UBERON:0002435!2.52e-07!4;UBERON:0000204!2.52e-07!4;UBERON:0010082!2.52e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.81e-55;34!UBERON:0003528;2.68e-54;34!UBERON:0002020;2.68e-54;34!UBERON:0001869;8.72e-54;32!UBERON:0002791;9.35e-54;32!UBERON:0002780;1.55e-51;41!UBERON:0001890;1.55e-51;41!UBERON:0002619;8.30e-51;22!UBERON:0000073;1.41e-48;53!UBERON:0002616;1.41e-48;53!UBERON:0001950;5.09e-46;20!UBERON:0000956;3.56e-44;25!UBERON:0000203;3.56e-44;25!UBERON:0001017;7.72e-35;75!UBERON:0000955;9.43e-34;68!UBERON:0001016;2.76e-30;83!UBERON:0002420;1.42e-22;9!UBERON:0007245;1.42e-22;9!UBERON:0010009;1.42e-22;9!UBERON:0010011;1.42e-22;9!UBERON:0000454;1.42e-22;9!UBERON:0000125;6.03e-22;9!UBERON:0002308;6.03e-22;9!UBERON:0009663;1.15e-17;7!UBERON:0004732;3.09e-17;13!UBERON:0000200;4.06e-15;6!UBERON:0004733;4.20e-15;12!UBERON:0002028;4.20e-15;12!UBERON:0002298;1.11e-14;6!UBERON:0007023;1.31e-14;114!UBERON:0001871;6.83e-14;6!UBERON:0000349;1.07e-13;5!UBERON:0011216;1.73e-13;132!UBERON:0002021;2.38e-13;5!UBERON:0001872;3.58e-13;5!UBERON:0000369;3.95e-11;4!UBERON:0002435;3.95e-11;4!UBERON:0000204;3.95e-11;4!UBERON:0002784;3.91e-10;4!UBERON:0002680;2.86e-09;9!UBERON:0001895;2.86e-09;9!UBERON:0001894;6.89e-09;7!UBERON:0005383;9.69e-09;3!UBERON:0005382;9.69e-09;3!UBERON:0002240;2.29e-08;3!UBERON:0005174;2.29e-08;3!UBERON:0001137;2.29e-08;3!UBERON:0001870;3.42e-08;3!UBERON:0000988;3.46e-08;3!UBERON:0001896;3.59e-08;3!UBERON:0005290;3.59e-08;3!UBERON:0010314;1.51e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.96e-94,56;UBERON:0005068,8.96e-94,56;UBERON:0006241,8.96e-94,56;UBERON:0007135,8.96e-94,56;UBERON:0001017,1.22e-88,81;UBERON:0000073,9.97e-87,53;UBERON:0002616,9.97e-87,53;UBERON:0001016,1.29e-84,89;UBERON:0000955,3.13e-74,68;UBERON:0006238,3.13e-74,68;UBERON:0002780,1.73e-72,41;UBERON:0001890,1.73e-72,41;UBERON:0003080,1.73e-72,41;UBERON:0006240,1.73e-72,41;UBERON:0003075,7.14e-66,82;UBERON:0007284,7.14e-66,82;UBERON:0001893,2.73e-65,34;UBERON:0003528,7.45e-65,34;UBERON:0002020,7.45e-65,34;UBERON:0002346,3.34e-62,86;UBERON:0001869,1.58e-60,32;UBERON:0002791,1.98e-60,32;UBERON:0010371,1.48e-53,104;UBERON:0003056,2.38e-51,61;UBERON:0002619,6.49e-51,22;UBERON:0007023,8.74e-48,114;UBERON:0001950,4.09e-46,20;UBERON:0000956,2.87e-44,25;UBERON:0000203,2.87e-44,25;UBERON:0004121,8.91e-44,171;UBERON:0000924,8.91e-44,171;UBERON:0006601,8.91e-44,171;UBERON:0010314,9.14e-38,132;UBERON:0011216,8.21e-34,223;UBERON:0002420,1.44e-22,9;UBERON:0007245,1.44e-22,9;UBERON:0010009,1.44e-22,9;UBERON:0010011,1.44e-22,9;UBERON:0000454,1.44e-22,9;UBERON:0000125,6.58e-22,9;UBERON:0002308,6.58e-22,9;UBERON:0003076,2.54e-21,15;UBERON:0003057,2.54e-21,15;UBERON:0000025,2.07e-19,192;UBERON:0009663,1.21e-17,7;UBERON:0004732,3.39e-17,13;UBERON:0000200,3.59e-15,6;UBERON:0004733,4.63e-15,12;UBERON:0002028,4.63e-15,12;UBERON:0007277,4.63e-15,12;UBERON:0002298,1.21e-14,6;UBERON:0004111,1.29e-14,240;UBERON:0001871,6.25e-14,6;UBERON:0000349,1.02e-13,5;UBERON:0002021,2.20e-13,5;UBERON:0001872,3.87e-13,5;UBERON:0000369,4.16e-11,4;UBERON:0002435,4.16e-11,4;UBERON:0000204,4.16e-11,4;UBERON:0010082,4.16e-11,4;UBERON:0000483,1.06e-10,306;UBERON:0000119,1.79e-10,309;UBERON:0002784,4.10e-10,4;UBERON:0002680,3.06e-09,9;UBERON:0001895,3.06e-09,9;UBERON:0010092,3.06e-09,9;UBERON:0001894,7.08e-09,7;UBERON:0006222,7.08e-09,7;UBERON:0005383,1.01e-08,3;UBERON:0005382,1.01e-08,3;UBERON:0002240,2.23e-08,3;UBERON:0005174,2.23e-08,3;UBERON:0001137,2.23e-08,3;UBERON:0001870,3.09e-08,3;UBERON:0000988,3.68e-08,3;UBERON:0001896,3.68e-08,3;UBERON:0005290,3.68e-08,3;UBERON:0010096,3.68e-08,3;UBERON:0000923,8.12e-07,560;UBERON:0010316,8.12e-07,560;UBERON:0005291,8.12e-07,560;UBERON:0006598,8.12e-07,560;UBERON:0010317,8.12e-07,560;UBERON:0002532,8.12e-07,560 | |||
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|short_description=p2@BCAN | |short_description=p2@BCAN | ||
}} | }} |
Latest revision as of 16:50, 17 September 2015
Short description: | p2@BCAN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BCAN_5end |
Coexpression cluster: | C1816_spinal_Melanocyte_brain_hippocampus_amygdala_corpus_temporal |
Association with transcript: | 16bp_to_ENST00000479949_5end |
EntrezGene: | BCAN |
HGNC: | 23059 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 5.02e-12 | 10 |
melanoblast | 5.02e-12 | 10 |
pigment cell | 2.94e-08 | 14 |
neuronal stem cell | 1.54e-07 | 8 |