FFCP PHASE1:Hg19::chr12:58135903..58135974,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:58135903..58135974,-
|short_description=p1@AGAP2
|description=CAGE_peak_1_at_AGAP2_5end
|association_with_transcript=0bp_to_ENST00000257897,NM_014770,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116986 | |EntrezGene=116986 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16921 | |HGNC=16921 | ||
|TSSclassifier=strong | |||
|UniProt=Q99490 | |UniProt=Q99490 | ||
|association_with_transcript=0bp_to_ENST00000257897,NM_014770,uc001spr.2_5end | |||
|cluster_id=chr12:58135903..58135974,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_AGAP2_5end | |||
|id=chr12:58135903..58135974,- | |||
|ontology_enrichment_celltype=CL:0000037!3.22e-71!172;CL:0000566!3.22e-71!172;CL:0000988!2.92e-68!182;CL:0002032!1.23e-66!165;CL:0000837!1.23e-66!165;CL:0000738!1.85e-58!140;CL:0002031!5.00e-46!124;CL:0002087!1.16e-45!119;CL:0000542!8.73e-33!53;CL:0000051!8.73e-33!53;CL:0000838!2.65e-32!52;CL:0000763!7.04e-32!112;CL:0000049!7.04e-32!112;CL:0000766!1.90e-20!76;CL:0000084!5.20e-18!25;CL:0000827!5.20e-18!25;CL:0000557!1.38e-16!71;CL:0000839!3.71e-15!70;CL:0000791!2.24e-14!18;CL:0000789!2.24e-14!18;CL:0002420!2.24e-14!18;CL:0002419!2.24e-14!18;CL:0000790!2.24e-14!18;CL:0002009!1.11e-13!65;CL:0002194!3.06e-13!63;CL:0000576!3.06e-13!63;CL:0000040!3.06e-13!63;CL:0000559!3.06e-13!63;CL:0000945!3.62e-13!24;CL:0000826!3.62e-13!24;CL:0002057!3.24e-10!42;CL:0000625!7.70e-10!11;CL:0000860!1.14e-08!45;CL:0000134!2.69e-08!358;CL:0000236!3.03e-08!14;CL:0000094!2.49e-07!8;CL:0002320!2.63e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000542;9.46e-26;53!CL:0000084;9.32e-25;25!CL:0000791;1.29e-19;18!CL:0000789;1.29e-19;18!CL:0002419;1.29e-19;18!CL:0000945;8.12e-18;24!CL:0000738;1.89e-14;136!CL:0002087;5.52e-14;104!CL:0000988;2.94e-13;177!CL:0000625;3.23e-13;11!CL:0000763;2.13e-10;100!CL:0000236;2.35e-10;13!CL:0000094;1.14e-09;8!CL:0000081;7.89e-08;11!CL:0000766;1.38e-07;69!CL:0000624;3.65e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.44e-85,168;CL:0000988,5.34e-83,177;CL:0002032,6.68e-79,161;CL:0000837,6.68e-79,161;CL:0000738,6.79e-69,136;CL:0002087,1.07e-52,115;CL:0002031,1.34e-51,120;CL:0000542,1.36e-45,53;CL:0000051,1.36e-45,53;CL:0000838,6.50e-45,52;CL:0000763,6.28e-33,108;CL:0000049,6.28e-33,108;CL:0000084,1.01e-24,25;CL:0000827,1.01e-24,25;CL:0000791,1.34e-19,18;CL:0000789,1.34e-19,18;CL:0002420,1.34e-19,18;CL:0002419,1.34e-19,18;CL:0000790,1.34e-19,18;CL:0000766,1.61e-19,72;CL:0000134,2.34e-18,354;CL:0000945,6.77e-18,24;CL:0000826,6.77e-18,24;CL:0002320,3.19e-17,361;CL:0000557,3.85e-14,67;CL:0000219,2.52e-13,386;CL:0000625,3.28e-13,11;CL:0000839,1.02e-12,66;CL:0000236,5.70e-11,14;CL:0002194,9.75e-11,59;CL:0000576,9.75e-11,59;CL:0000040,9.75e-11,59;CL:0000559,9.75e-11,59;CL:0002009,1.05e-10,61;CL:0000094,1.09e-09,8;CL:0000048,3.69e-09,427;CL:0000034,5.00e-09,441;CL:0000723,1.45e-08,433;CL:0000081,7.29e-08,11;CL:0000624,3.71e-07,6;CL:0000473,4.23e-07,48;CL:0000234,4.23e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000051;9.46e-26;53!CL:0000790;1.29e-19;18!CL:0000049;2.29e-10;108 | |||
|ontology_enrichment_disease=DOID:2531!2.13e-19!51;DOID:0060083!2.13e-19!51;DOID:1240!2.82e-15!39;DOID:8692!3.15e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.38e-15;39!DOID:2531;2.42e-15;51!DOID:0060083;2.42e-15;51!DOID:8692;4.30e-14;31!DOID:0060058;1.87e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.36e-25,51;DOID:0060083,1.36e-25,51;DOID:1240,2.55e-20,39;DOID:8692,1.19e-14,31;DOID:0060058,1.64e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.41e-26!102;UBERON:0003061!6.41e-26!102;UBERON:0002193!1.64e-22!112;UBERON:0002371!5.76e-14!80;UBERON:0002405!6.36e-12!115;UBERON:0001474!1.89e-11!86;UBERON:0000178!2.52e-11!15;UBERON:0000179!2.52e-11!15;UBERON:0000463!2.52e-11!15;UBERON:0007023!7.96e-08!115;UBERON:0004765!1.94e-07!101;UBERON:0001434!1.94e-07!101;UBERON:0002384!6.30e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.00e-15;15!UBERON:0000179;3.00e-15;15!UBERON:0000463;3.00e-15;15!UBERON:0002390;5.05e-12;32!UBERON:0002193;8.67e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.69e-28,98;UBERON:0003061,8.69e-28,98;UBERON:0002193,2.40e-25,108;UBERON:0002384,3.66e-16,371;UBERON:0000178,2.66e-15,15;UBERON:0000179,2.66e-15,15;UBERON:0000463,2.66e-15,15;UBERON:0002405,4.58e-15,93;UBERON:0002371,1.13e-12,76;UBERON:0001474,8.56e-11,82;UBERON:0004765,9.67e-09,90;UBERON:0004177,4.02e-07,7;UBERON:0005057,4.02e-07,7;UBERON:0001434,9.85e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,7.64134057479513,6.97855010324539,6.84783797429009,13.7677496897116,19.5752993029578,4.4896675761662,0,0,0,9.76086727311801,4.40724620711007,14.6800219667424,6.09394949385065,4.41197784434312,9.11445657006578,4.92614043327834,6.80176698639857,3.60605794687861,2.18097358169347,1.88937971844405,2.91100873425379,0.464858073811369,0.411167888021826,0.619412741790207,0.863077176966451,0.768482119587302,1.18241114944293,2.41321976515633,1.93645405075148,1.35426486594342,1.12945403725563,1.36453075028923,0.449446968890169,1.53041946185451,1.60464513538047,0.639337125799041,0.989553900560148,0.398927315243264,1.70489900213078,1.45104619314292,0.56738522469114,0,1.50749199154046,1.0429658368404,0.868755378820466,1.21079900526674,1.47311054395026,0.632924774881769,1.05627643155971,2.12604299965044,0.838634582033504,1.12328631146495,1.35159203557356,1.44653028027372,1.42506371870624,0.39783335439818,0.91332076882317,12.3197371122926,12.0150494477669,8.89509253863555,8.10787422876364,10.8106916499723,8.62128659931725,8.59358334620321,8.58648379081828,2.84606484554724,3.52342313622563,2.29363936875137,11.8954195721123,11.2101712596307,11.0621315605532,14.163103448196,19.2575273747091,24.4665783809416,19.226446969928,14.340579731878,16.0972253949809,19.4826728407911,23.9532482303123,13.8464776513173,17.5011776721061,23.5599361475564,27.5396337410202,20.5493769144608,20.7191759800632,13.8175008892924,18.5473974870434,15.5700891320163,14.7147455449342,18.8163942848958,26.0611488204402,16.8617017184845,16.8377448286489,23.2778116657943,23.5738406599832,26.6944216081132,20.9099449778642,24.3931692905992,25.7253088420381,21.2382235138988,29.8339337575461,34.487375870684,26.6120901056647,24.0696176205157,23.4615534290134,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,3.24547393654683,1.74129737299267,4.25465473660369,3.10037811596945,2.28797964312051,2.22874500797739,0.39752481473341,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,54.0299711487859,69.8004475466986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0,0.243947412259191,0.397589304964456,0.232387885739037,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,2.94848165003288,0.590789906681404,9.27072508770766,0.122988438543114,0,0.439001141634502,0,0,0.277765335475589,0,0,0,0,0,0,0,0,3.95102198979638,0.858486162094873,1.47730203652438,2.10603838625314,2.0808362720422,0,0.16798212819886,0,0.0895585227028483,0,0,9.36060152002293,11.7104417237591,5.1832028885193,8.35895729818376,7.70078843900918,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,2.51128545716063,2.10833939483032,0,0,0,0,0,0,13.5623024232168,24.0377527446351,26.7378192825801,26.5670085099079,0,0,0,0,0,59.9205619157746,41.8826042885635,50.1442771257603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5451693322673,9.70713903683776,14.9418580924822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0,0.657779629937804,0,0,0,0,0.412164046590889,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.239293992399,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.659006605437454,0,3.36942951335251,0,0.229723400206959,24.8649328523763,20.6452045928441,27.3430649843598,24.7761046476101,21.8022004735683,24.6419858253233,27.5416032991439,27.7593811702995,0.534120355637366,0.962479855263359,0.245040215981032,5.01668572839441,4.61661481524624,3.55709216742071,11.0004128182887,11.974762285969,11.2988168378096,31.9627109913063,7.46630462631478,23.3061657834171,6.84704037099577,4.23035718587163,10.0253790836027,15.5748435577475,4.17528995269619,3.22879531505676,4.25846237690326,5.15258017133647,7.06653757909453,3.13146551049382,4.33807768450962,4.88470238505101,0.278406173895242,2.46174797895425,4.05683517713975,19.6512461118714,4.22961015263549,1.8714054040822,0.586032717087576,0,9.02691412647575,0,0.23874448473769,0.296964680832639,0,0,0.562677665642051,0.111308705022906,9.88823245360557,0,1.19548792950642,11.6039244523082,0,0.20453736500431,4.92339221844278,0,0.449341755736634,0.358042349351218,2.55786185113436,1.1837208676432,19.1586473877552,0,0,0.278304294485554,0,2.86470537193757,0.699679999969566,0.724999575434793,0,0,0,1.03423011972439,0,0,0,0.241192877250816,0,0.331737779793674,0,0,0,0.139423744278603,0.307801034015188,0,0,1.70539524378567,0,0.31900115973192,0,0,10.2193298195736,12.715400767997,5.98362054840563,0,0.19606253431774,0,0,4.13235105348985,0,1.14262965711403,0,0,0,1.76915129006678,1.22206028986725,4.74433805888995,6.79601664205766,7.30953646538188,0.539209063845416,0,0,9.48764903921463,0.978323094660449,0,0.394584402849391,1.20990716048664,0,1.95878396848313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| ||
|short_description=p1@AGAP2 | |||
}} | }} |
Latest revision as of 16:17, 19 September 2015
Short description: | p1@AGAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AGAP2_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000257897, NM_014770, uc001spr.2_5end |
EntrezGene: | AGAP2 |
HGNC: | 16921 |
UniProt: | Q99490 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.69e-28 | 98 |
blood island | 8.69e-28 | 98 |
hemolymphoid system | 2.40e-25 | 108 |
connective tissue | 3.66e-16 | 371 |
blood | 2.66e-15 | 15 |
haemolymphatic fluid | 2.66e-15 | 15 |
organism substance | 2.66e-15 | 15 |
immune system | 4.58e-15 | 93 |
bone marrow | 1.13e-12 | 76 |
bone element | 8.56e-11 | 82 |
skeletal element | 9.67e-09 | 90 |
hemopoietic organ | 4.02e-07 | 7 |
immune organ | 4.02e-07 | 7 |
skeletal system | 9.85e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.36e-25 | 51 |
immune system cancer | 1.36e-25 | 51 |
leukemia | 2.55e-20 | 39 |
myeloid leukemia | 1.19e-14 | 31 |
lymphoma | 1.64e-08 | 10 |