FFCP PHASE1:Hg19::chr12:68617683..68617703,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:68617683..68617703,+
|short_description=p@chr12:68617683..68617703,+
|description=CAGE_peak_at_chr12:68617683..68617703,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:68617683..68617703,+ | |||
|coexpression_cluster_id=C153 | |||
|description=CAGE_peak_at_chr12:68617683..68617703,+ | |||
|id=chr12:68617683..68617703,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.57e-16!52;CL:0000542!6.37e-16!53;CL:0000051!6.37e-16!53;CL:0000791!1.42e-10!18;CL:0000789!1.42e-10!18;CL:0002420!1.42e-10!18;CL:0002419!1.42e-10!18;CL:0000790!1.42e-10!18;CL:0000084!5.01e-09!25;CL:0000827!5.01e-09!25;CL:0002087!9.43e-09!119;CL:0000945!8.68e-08!24;CL:0000826!8.68e-08!24;CL:0000625!2.20e-07!11;CL:0002031!2.52e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000236;8.33e-18;13!CL:0000945;5.65e-10;24!CL:0000083;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.20e-16,14;CL:0000945,5.23e-10,24;CL:0000826,5.23e-10,24;CL:0000838,4.54e-08,52;CL:0000542,6.35e-08,53;CL:0000051,6.35e-08,53;CL:0000083,1.92e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.15e-26;1!UBERON:0003056;1.14e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;7.62e-26;1!DOID:10165;7.62e-26;1!DOID:1798;7.62e-26;1!DOID:1793;1.80e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,9.79e-26,1;DOID:10165,9.79e-26,1;DOID:1798,9.79e-26,1;DOID:1793,1.92e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001829!8.03e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.15e-26;1!UBERON:0001785;3.15e-26;1!UBERON:0002464;3.15e-26;1!UBERON:0004904;3.15e-26;1!UBERON:0001021;3.15e-26;1!UBERON:0003714;7.77e-14;2!UBERON:0005162;7.77e-14;2!UBERON:0000122;7.77e-14;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.58e-26,1;UBERON:0001785,3.58e-26,1;UBERON:0002464,3.58e-26,1;UBERON:0004904,3.58e-26,1;UBERON:0001021,3.58e-26,1;UBERON:0003902,3.58e-26,1;UBERON:0005425,3.58e-26,1;UBERON:0003714,8.28e-14,2;UBERON:0005162,8.28e-14,2;UBERON:0000122,8.28e-14,2;UBERON:0001781,1.49e-07,4 | |||
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| ||
|short_description=p@chr12:68617683..68617703,+ | |||
}} | }} |
Latest revision as of 11:40, 24 July 2015
Short description: | p@chr12:68617683..68617703, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:68617683..68617703, + |
Coexpression cluster: | C153_rhabdomyosarcoma_liposarcoma_pancreatic_somatostatinoma_Reticulocytes_lymphoma_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.20e-16 | 14 |
lymphocyte of B lineage | 5.23e-10 | 24 |
pro-B cell | 5.23e-10 | 24 |
lymphoid lineage restricted progenitor cell | 4.54e-08 | 52 |
lymphocyte | 6.35e-08 | 53 |
common lymphoid progenitor | 6.35e-08 | 53 |
epithelial cell of pancreas | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.58e-26 | 1 |
cranial nerve | 3.58e-26 | 1 |
nerve trunk | 3.58e-26 | 1 |
nerve connecting eye with brain | 3.58e-26 | 1 |
nerve | 3.58e-26 | 1 |
retinal neural layer | 3.58e-26 | 1 |
presumptive neural retina | 3.58e-26 | 1 |
neural tissue | 8.28e-14 | 2 |
multi cell component structure | 8.28e-14 | 2 |
neuron projection bundle | 8.28e-14 | 2 |
layer of retina | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 9.79e-26 | 1 |
endocrine pancreas cancer | 9.79e-26 | 1 |
pancreatic endocrine carcinoma | 9.79e-26 | 1 |
pancreatic cancer | 1.92e-07 | 4 |