FFCP PHASE1:Hg19::chr5:149492967..149492997,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1436 | |EntrezGene=1436 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2433 | |HGNC=2433 | ||
|TSSclassifier=strong | |||
|UniProt=P07333,D6RGW1 | |UniProt=P07333,D6RGW1 | ||
|association_with_transcript=-32bp_to_ENST00000286301,ENST00000511344,NM_005211,uc003lrm.2_5end | |association_with_transcript=-32bp_to_ENST00000286301,ENST00000511344,NM_005211,uc003lrm.2_5end | ||
|cluster_id=chr5:149492967..149492997,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_5_at_CSF1R_5end | |description=CAGE_peak_5_at_CSF1R_5end | ||
|id=chr5:149492967..149492997,- | |id=chr5:149492967..149492997,- | ||
|ontology_enrichment_celltype=CL:0002541!2.14e-08!3;CL:0000039!4.59e-08!7;CL:0000586!4.59e-08!7;CL:0000349!6.80e-08!3;CL:0002577!6.80e-08!3;CL:0002586!9.12e-08!3 | |ontology_enrichment_celltype=CL:0002541!2.14e-08!3;CL:0000039!4.59e-08!7;CL:0000586!4.59e-08!7;CL:0000349!6.80e-08!3;CL:0002577!6.80e-08!3;CL:0002586!9.12e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.45e-34;19!CL:0002541;2.84e-22;3!CL:0002577;1.37e-20;3!CL:0002536;5.33e-15;2!CL:0001014;1.57e-14;2!CL:0001016;1.57e-14;2!CL:0002586;5.42e-10;3!CL:0000039;1.08e-09;7!CL:0000586;1.08e-09;7!CL:0000149;1.05e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.45e-34,19;CL:0002541,2.84e-22,3;CL:0002577,9.39e-21,3;CL:0002536,5.92e-15,2;CL:0001014,1.37e-14,2;CL:0001016,1.37e-14,2;CL:0002586,5.94e-10,3;CL:0000039,1.14e-09,7;CL:0000586,1.14e-09,7;CL:0000149,1.12e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.05e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;1.69e-08;1!DOID:10165;1.69e-08;1!DOID:1798;1.69e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.63e-08,1;DOID:10165,1.63e-08,1;DOID:1798,1.63e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!9.82e-23!14;UBERON:0000158!9.82e-23!14;UBERON:0004923!2.08e-19!57;UBERON:0003124!7.05e-17!7;UBERON:0000478!8.20e-14!24;UBERON:0000966!1.38e-11!5;UBERON:0005388!1.38e-11!5;UBERON:0001802!1.38e-11!5;UBERON:0001987!3.54e-10!4;UBERON:0004340!3.54e-10!4;UBERON:0000476!2.14e-08!3;UBERON:0000920!2.14e-08!3;UBERON:0000305!2.39e-08!7;UBERON:0000064!8.27e-08!219;UBERON:0001781!9.12e-08!3;UBERON:0001782!9.12e-08!3;UBERON:0005424!9.12e-08!3;UBERON:0004871!3.08e-07!8;UBERON:0005085!8.30e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.55e-33;10!UBERON:0000158;1.55e-33;10!UBERON:0000478;5.94e-33;24!UBERON:0001987;1.61e-27;4!UBERON:0003124;2.84e-22;3!UBERON:0000920;2.84e-22;3!UBERON:0000305;5.86e-16;7!UBERON:0001905;1.07e-14;2!UBERON:0002757;1.07e-14;2!UBERON:0010134;1.07e-14;2!UBERON:0005408;1.07e-14;2!UBERON:0001899;1.07e-14;2!UBERON:0000966;4.22e-13;5!UBERON:0005388;4.22e-13;5!UBERON:0001802;4.22e-13;5!UBERON:0001781;5.42e-10;3!UBERON:0001782;5.42e-10;3!UBERON:0003296;8.68e-08;4!UBERON:0010133;8.68e-08;4!UBERON:0002784;8.68e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.09e-58,14;UBERON:0000158,8.09e-58,14;UBERON:0003124,3.72e-48,7;UBERON:0000478,5.94e-33,24;UBERON:0001987,1.10e-27,4;UBERON:0004340,1.10e-27,4;UBERON:0000920,2.84e-22,3;UBERON:0004923,8.81e-18,66;UBERON:0000305,7.26e-16,7;UBERON:0001905,7.84e-15,2;UBERON:0002757,7.84e-15,2;UBERON:0010134,7.84e-15,2;UBERON:0005408,7.84e-15,2;UBERON:0001899,7.84e-15,2;UBERON:0004871,6.58e-14,8;UBERON:0000966,5.64e-11,6;UBERON:0005388,5.64e-11,6;UBERON:0001802,5.64e-11,6;UBERON:0001782,5.94e-10,3;UBERON:0005424,5.94e-10,3;UBERON:0003296,7.44e-08,4;UBERON:0010133,7.44e-08,4;UBERON:0002784,7.44e-08,4;UBERON:0001781,1.12e-07,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,4.36882744260345,5.01157258634062,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,4.67356066463832,0,0,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0.234004265139238,0,0,0.335964256397719,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,1.5156378572313,1.66435439510497,1.5119514666484,0.248107807818777,0,0,0,0,0.160853921143607,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0.512900250232778,1.31205858279882,2.92840555197873,20.5051613178967,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.3120807840967,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,0.296964680832639,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41832609060762,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,11.7587591237911,23.3369875465408,2.17294743844016,14.0360510282045,9.61774730719554,44.7749211855653,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0.34945333648406,0,0,0,0,0,0,5.42353777873278,0,0,0,0.391102765469606,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4747128070665,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0.115525666150338,0,0,0,0,0.40341013740704,0,11.785801251664,0,0,0,0,0,0,0,0,0,0,0,5.35701835878287,1.68141861109412,0.606965604236632,0,40.270876053838,0,0,0,0,0,0,0,0,0,0,0,0,24.2305484758865,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0.101988829741982,0,0.36757959813938,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,4.36882744260345,5.01157258634062,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,4.67356066463832,0,0,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0.234004265139238,0,0,0.335964256397719,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,1.5156378572313,1.66435439510497,1.5119514666484,0.248107807818777,0,0,0,0,0.160853921143607,0,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0.512900250232778,1.31205858279882,2.92840555197873,20.5051613178967,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.3120807840967,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,0.296964680832639,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41832609060762,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0,11.7587591237911,23.3369875465408,2.17294743844016,14.0360510282045,9.61774730719554,44.7749211855653,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0.284609546029793,0,0,0,0.0870592065804026,0.34945333648406,0,0,0,0,0,0,5.42353777873278,0,0,0,0.391102765469606,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4747128070665,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0,0.115525666150338,0,0,0,0,0.40341013740704,0,11.785801251664,0,0,0,0,0,0,0,0,0,0,0,5.35701835878287,1.68141861109412,0.606965604236632,0,40.270876053838,0,0,0,0,0,0,0,0,0,0,0,0,24.2305484758865,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0.101988829741982,0,0.36757959813938,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@CSF1R | |short_description=p5@CSF1R | ||
}} | }} |
Latest revision as of 02:55, 16 September 2015
Short description: | p5@CSF1R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CSF1R_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | -32bp_to_ENST00000286301, ENST00000511344, NM_005211, uc003lrm.2_5end |
EntrezGene: | CSF1R |
HGNC: | 2433 |
UniProt: | P07333D6RGW1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.45e-34 | 19 |
chorionic membrane mesenchymal stem cell | 2.84e-22 | 3 |
placental epithelial cell | 9.39e-21 | 3 |
amniotic epithelial cell | 5.92e-15 | 2 |
CD1a-positive Langerhans cell | 1.37e-14 | 2 |
immature CD1a-positive Langerhans cell | 1.37e-14 | 2 |
retinal pigment epithelial cell | 5.94e-10 | 3 |
germ line cell | 1.14e-09 | 7 |
germ cell | 1.14e-09 | 7 |
visual pigment cell | 1.12e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.09e-58 | 14 |
membranous layer | 8.09e-58 | 14 |
chorion | 3.72e-48 | 7 |
extraembryonic structure | 5.94e-33 | 24 |
placenta | 1.10e-27 | 4 |
allantois | 1.10e-27 | 4 |
egg chorion | 2.84e-22 | 3 |
organ component layer | 8.81e-18 | 66 |
amnion | 7.26e-16 | 7 |
pineal body | 7.84e-15 | 2 |
regional part of epithalamus | 7.84e-15 | 2 |
secretory circumventricular organ | 7.84e-15 | 2 |
circumventricular organ | 7.84e-15 | 2 |
epithalamus | 7.84e-15 | 2 |
somatic layer of lateral plate mesoderm | 6.58e-14 | 8 |
retina | 5.64e-11 | 6 |
photoreceptor array | 5.64e-11 | 6 |
posterior segment of eyeball | 5.64e-11 | 6 |
pigmented layer of retina | 5.94e-10 | 3 |
presumptive retinal pigmented epithelium | 5.94e-10 | 3 |
gland of diencephalon | 7.44e-08 | 4 |
neuroendocrine gland | 7.44e-08 | 4 |
regional part of diencephalon | 7.44e-08 | 4 |
layer of retina | 1.12e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.63e-08 | 1 |
endocrine pancreas cancer | 1.63e-08 | 1 |
pancreatic endocrine carcinoma | 1.63e-08 | 1 |