FFCP PHASE1:Hg19::chr6:12296671..12296685,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:12296671..12296685,+ | |||
|coexpression_cluster_id=C4552 | |||
|description=CAGE_peak_at_chr6:12296671..12296685,+ | |description=CAGE_peak_at_chr6:12296671..12296685,+ | ||
|id=chr6:12296671..12296685,+ | |id=chr6:12296671..12296685,+ | ||
|ontology_enrichment_celltype=CL:0002139!5.64e-15!24;CL:0000115!1.21e-09!35;CL:0005020!4.17e-09!6;CL:0002138!4.17e-09!6;CL:0005022!4.17e-09!6;CL:0000071!1.53e-08!18;CL:0002546!1.53e-08!18;CL:0000213!1.81e-08!57;CL:0000215!1.81e-08!57;CL:0000066!2.12e-08!254;CL:0000076!2.59e-08!62 | |ontology_enrichment_celltype=CL:0002139!5.64e-15!24;CL:0000115!1.21e-09!35;CL:0005020!4.17e-09!6;CL:0002138!4.17e-09!6;CL:0005022!4.17e-09!6;CL:0000071!1.53e-08!18;CL:0002546!1.53e-08!18;CL:0000213!1.81e-08!57;CL:0000215!1.81e-08!57;CL:0000066!2.12e-08!254;CL:0000076!2.59e-08!62 | ||
|ontology_enrichment_celltype_v019=CL:0002138;8.44e-37;6!CL:0002139;3.72e-35;24!CL:0000115;2.09e-24;36!CL:0002078;2.63e-16;45!CL:0002144;4.60e-13;3!CL:0000071;4.08e-12;18!CL:1000306;1.17e-09;4!CL:0002547;1.17e-09;4!CL:0000213;4.97e-09;58!CL:0000215;4.97e-09;58!CL:0002537;6.76e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.14e-36,6;CL:0002138,1.14e-36,6;CL:0005022,1.14e-36,6;CL:0002139,3.23e-35,24;CL:0000115,6.35e-28,36;CL:0002078,5.40e-22,45;CL:0000213,1.14e-16,58;CL:0000215,1.14e-16,58;CL:0002144,4.61e-13,3;CL:0000071,3.38e-12,18;CL:0002546,3.38e-12,18;CL:1000306,1.39e-09,4;CL:0002547,1.39e-09,4;CL:0000222,1.79e-08,121;CL:0002537,5.69e-08,5 | |||
|ontology_enrichment_development_v019=CL:0005022;8.44e-37;6!CL:0002546;4.08e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;6.91e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,4.85e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000055!3.58e-11!69;UBERON:0002049!4.25e-11!79;UBERON:0007798!4.25e-11!79;UBERON:0001986!1.53e-08!18;UBERON:0004638!1.53e-08!18;UBERON:0004852!1.53e-08!18;UBERON:0001009!2.10e-08!113;UBERON:0004535!2.30e-08!110;UBERON:0001981!6.61e-08!60;UBERON:0007500!6.61e-08!60;UBERON:0004537!6.61e-08!60;UBERON:0006965!6.61e-08!60;UBERON:0001637!1.58e-07!42;UBERON:0003509!1.58e-07!42;UBERON:0004572!1.58e-07!42;UBERON:0004872!2.95e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;1.33e-27;8!UBERON:0004536;1.33e-27;8!UBERON:0006558;1.33e-27;8!UBERON:0002465;4.46e-22;10!UBERON:0000055;6.92e-14;65!UBERON:0010523;4.60e-13;3!UBERON:0001915;4.60e-13;3!UBERON:0001982;4.60e-13;3!UBERON:0004638;4.08e-12;18!UBERON:0001986;4.08e-12;18!UBERON:0004852;4.08e-12;18!UBERON:0000487;6.95e-10;22!UBERON:0002049;1.06e-09;75!UBERON:0007798;1.06e-09;75!UBERON:0004797;1.17e-09;4!UBERON:0000415;1.17e-09;4!UBERON:0007240;1.17e-09;4!UBERON:0005742;1.17e-09;4!UBERON:0005734;1.17e-09;4!UBERON:0004664;1.17e-09;4!UBERON:0004663;1.17e-09;4!UBERON:0006914;1.12e-08;25!UBERON:0002405;4.36e-08;27!UBERON:0000490;7.36e-08;33!UBERON:0000947;8.03e-07;21!UBERON:0010191;8.03e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.66e-27,8;UBERON:0004536,1.66e-27,8;UBERON:0006558,1.66e-27,8;UBERON:0002465,5.33e-22,10;UBERON:0000055,1.47e-19,68;UBERON:0002049,9.00e-17,78;UBERON:0007798,9.00e-17,78;UBERON:0010523,4.61e-13,3;UBERON:0001915,4.61e-13,3;UBERON:0001982,4.61e-13,3;UBERON:0004638,3.38e-12,18;UBERON:0001986,3.38e-12,18;UBERON:0004852,3.38e-12,18;UBERON:0004535,2.25e-11,109;UBERON:0001009,5.20e-11,112;UBERON:0000487,5.97e-10,22;UBERON:0000415,1.39e-09,4;UBERON:0007240,1.39e-09,4;UBERON:0005742,1.39e-09,4;UBERON:0005734,1.39e-09,4;UBERON:0004664,1.39e-09,4;UBERON:0004663,1.39e-09,4;UBERON:0006914,9.81e-09,25;UBERON:0007500,1.89e-08,59;UBERON:0001981,1.89e-08,59;UBERON:0004537,1.89e-08,59;UBERON:0006965,1.89e-08,59;UBERON:0000947,8.96e-07,21;UBERON:0010191,8.96e-07,21 | |||
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|short_description=p@chr6:12296671..12296685,+ | |short_description=p@chr6:12296671..12296685,+ | ||
}} | }} |
Latest revision as of 18:56, 30 July 2015
Short description: | p@chr6:12296671..12296685, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:12296671..12296685, + |
Coexpression cluster: | C4552_Lymphatic_Endothelial_Renal_pharyngeal_papillary_amniotic_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.14e-36 | 6 |
endothelial cell of lymphatic vessel | 1.14e-36 | 6 |
vascular lymphangioblast | 1.14e-36 | 6 |
endothelial cell of vascular tree | 3.23e-35 | 24 |
endothelial cell | 6.35e-28 | 36 |
meso-epithelial cell | 5.40e-22 | 45 |
lining cell | 1.14e-16 | 58 |
barrier cell | 1.14e-16 | 58 |
capillary endothelial cell | 4.61e-13 | 3 |
blood vessel endothelial cell | 3.38e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.38e-12 | 18 |
fibroblast of tunica adventitia of artery | 1.39e-09 | 4 |
fibroblast of the aortic adventitia | 1.39e-09 | 4 |
mesodermal cell | 1.79e-08 | 121 |
amnion mesenchymal stem cell | 5.69e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.66e-27 | 8 |
lymph vasculature | 1.66e-27 | 8 |
lymphatic part of lymphoid system | 1.66e-27 | 8 |
lymphoid system | 5.33e-22 | 10 |
vessel | 1.47e-19 | 68 |
vasculature | 9.00e-17 | 78 |
vascular system | 9.00e-17 | 78 |
microcirculatory vessel | 4.61e-13 | 3 |
endothelium of capillary | 4.61e-13 | 3 |
capillary | 4.61e-13 | 3 |
blood vessel endothelium | 3.38e-12 | 18 |
endothelium | 3.38e-12 | 18 |
cardiovascular system endothelium | 3.38e-12 | 18 |
cardiovascular system | 2.25e-11 | 109 |
circulatory system | 5.20e-11 | 112 |
simple squamous epithelium | 5.97e-10 | 22 |
artery wall | 1.39e-09 | 4 |
tunica adventitia of artery | 1.39e-09 | 4 |
adventitia | 1.39e-09 | 4 |
tunica adventitia of blood vessel | 1.39e-09 | 4 |
aorta tunica adventitia | 1.39e-09 | 4 |
aorta wall | 1.39e-09 | 4 |
squamous epithelium | 9.81e-09 | 25 |
epithelial tube open at both ends | 1.89e-08 | 59 |
blood vessel | 1.89e-08 | 59 |
blood vasculature | 1.89e-08 | 59 |
vascular cord | 1.89e-08 | 59 |
aorta | 8.96e-07 | 21 |
aortic system | 8.96e-07 | 21 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 4.85e-10 | 1 |