FFCP PHASE1:Hg19::chr1:99387558..99387571,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:99387558..99387571,- | |||
|description=CAGE_peak_at_chr1:99387558..99387571,- | |description=CAGE_peak_at_chr1:99387558..99387571,- | ||
|id=chr1:99387558..99387571,- | |id=chr1:99387558..99387571,- | ||
|ontology_enrichment_celltype=CL:0000244!4.40e-19!4;CL:0000731!4.40e-19!4;CL:0002621!8.87e-15!3;CL:0002166!1.11e-14!3;CL:0002159!2.74e-12!13;CL:0002551!2.49e-07!6;CL:0002076!7.32e-07!43 | |ontology_enrichment_celltype=CL:0000244!4.40e-19!4;CL:0000731!4.40e-19!4;CL:0002621!8.87e-15!3;CL:0002166!1.11e-14!3;CL:0002159!2.74e-12!13;CL:0002551!2.49e-07!6;CL:0002076!7.32e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000244;6.58e-45;4!CL:0000731;6.58e-45;4!CL:0002166;1.82e-27;3!CL:0002621;2.08e-27;3!CL:0002601;6.31e-21;1!CL:0002231;7.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,5.66e-45,4;CL:0000731,5.66e-45,4;CL:0002166,1.82e-27,3;CL:0002621,3.11e-27,3;CL:0002601,6.31e-21,1;CL:0002231,6.78e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009847;4.84e-08;3!UBERON:0003353;4.84e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!2.75e-15!5;UBERON:0001949!8.87e-15!3;UBERON:0005910!9.44e-13!6;UBERON:0001708!4.01e-11!4;UBERON:0001704!4.01e-11!4;UBERON:0000486!4.11e-09!82;UBERON:0002090!1.51e-07!6;UBERON:0003102!2.43e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;3.29e-41;12!UBERON:0000365;4.13e-36;5!UBERON:0005910;3.07e-30;6!UBERON:0001949;2.08e-27;3!UBERON:0001708;7.00e-21;4!UBERON:0008895;7.00e-21;4!UBERON:0011159;6.40e-17;5!UBERON:0003929;2.37e-12;7!UBERON:0003350;6.29e-11;8!UBERON:0001828;6.29e-11;8!UBERON:0005911;8.63e-11;36!UBERON:0011137;3.25e-08;11!UBERON:0010323;3.25e-08;11!UBERON:0002367;3.37e-08;11!UBERON:0010147;3.37e-08;11!UBERON:0003937;1.37e-07;12!UBERON:0005399;1.37e-07;12!UBERON:0003729;4.52e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.66e-36,5;UBERON:0005910,2.78e-30,6;UBERON:0001949,3.11e-27,3;UBERON:0001708,7.00e-21,4;UBERON:0008895,7.00e-21,4;UBERON:0011159,6.40e-17,5;UBERON:0010188,2.85e-14,6;UBERON:0002539,2.85e-14,6;UBERON:0008816,2.85e-14,6;UBERON:0005911,1.23e-11,82;UBERON:0003350,7.30e-11,8;UBERON:0001828,7.30e-11,8;UBERON:0006554,1.03e-10,47;UBERON:0001008,1.71e-10,48;UBERON:0000161,3.34e-09,36;UBERON:0000486,1.68e-08,83;UBERON:0002367,3.14e-08,11;UBERON:0010147,3.14e-08,11;UBERON:0009846,3.14e-08,11;UBERON:0003353,3.14e-08,11;UBERON:0004902,3.14e-08,11;UBERON:0003820,3.14e-08,11;UBERON:0009847,3.14e-08,11;UBERON:0010323,3.25e-08,11;UBERON:0003937,1.29e-07,12;UBERON:0005399,1.29e-07,12;UBERON:0003102,3.85e-07,99;UBERON:0003729,4.95e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469737994575059,0.485618833104395,0.561803226808994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09217365061275,1.09098448236334,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0.502644862058154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,2.18376766658517,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0,0,1.60405176242628,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,1.41904425628239,0,0,0,0,0.48111056362756,0,0,0,3.44404298136984,1.68471475667626,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.522355239482415,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44817345865414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469737994575059,0.485618833104395,0.561803226808994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09217365061275,1.09098448236334,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658501712451753,0,0.502644862058154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,2.18376766658517,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0,0,1.60405176242628,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0.143411352204052,0,0,1.41904425628239,0,0,0,0,0.48111056362756,0,0,0,3.44404298136984,1.68471475667626,0.443430153536676,1.1486170010348,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0.522355239482415,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44817345865414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:99387558..99387571,- | |short_description=p@chr1:99387558..99387571,- | ||
}} | }} |
Latest revision as of 11:44, 28 July 2015
Short description: | p@chr1:99387558..99387571, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:99387558..99387571, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 5.66e-45 | 4 |
urothelial cell | 5.66e-45 | 4 |
epithelial cell of Malassez | 1.82e-27 | 3 |
gingival epithelial cell | 3.11e-27 | 3 |
uterine smooth muscle cell | 6.31e-21 | 1 |
epithelial cell of prostate | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.66e-36 | 5 |
transitional epithelium | 2.78e-30 | 6 |
gingival epithelium | 3.11e-27 | 3 |
jaw skeleton | 7.00e-21 | 4 |
splanchnocranium | 7.00e-21 | 4 |
primary subdivision of cranial skeletal system | 6.40e-17 | 5 |
protuberance | 2.85e-14 | 6 |
pharyngeal arch | 2.85e-14 | 6 |
embryonic head | 2.85e-14 | 6 |
endo-epithelium | 1.23e-11 | 82 |
epithelium of mucosa | 7.30e-11 | 8 |
gingiva | 7.30e-11 | 8 |
urinary system structure | 1.03e-10 | 47 |
renal system | 1.71e-10 | 48 |
orifice | 3.34e-09 | 36 |
multilaminar epithelium | 1.68e-08 | 83 |
prostate gland | 3.14e-08 | 11 |
male accessory sex gland | 3.14e-08 | 11 |
embryonic cloacal epithelium | 3.14e-08 | 11 |
epithelium of hindgut | 3.14e-08 | 11 |
urogenital sinus epithelium | 3.14e-08 | 11 |
prostate bud | 3.14e-08 | 11 |
prostate field | 3.14e-08 | 11 |
cranial skeletal system | 3.25e-08 | 11 |
sex gland | 1.29e-07 | 12 |
male reproductive gland | 1.29e-07 | 12 |
surface structure | 3.85e-07 | 99 |
mouth mucosa | 4.95e-07 | 13 |