FFCP PHASE1:Hg19::chr6:157099387..157099403,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57492 | |EntrezGene=57492 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18040 | |HGNC=18040 | ||
|TSSclassifier=strong | |||
|UniProt=C9JZD6,F5H333 | |UniProt=C9JZD6,F5H333 | ||
|association_with_transcript=301bp_to_ENST00000354354,ENST00000506048,ENST00000535255_5end | |association_with_transcript=301bp_to_ENST00000354354,ENST00000506048,ENST00000535255_5end | ||
|cluster_id=chr6:157099387..157099403,+ | |||
|description=CAGE_peak_8_at_ARID1B_5end | |description=CAGE_peak_8_at_ARID1B_5end | ||
|id=chr6:157099387..157099403,+ | |id=chr6:157099387..157099403,+ | ||
|ontology_enrichment_celltype=CL:0000037!8.16e-13!172;CL:0000566!8.16e-13!172;CL:0000988!3.49e-12!182;CL:0002032!2.02e-10!165;CL:0000837!2.02e-10!165;CL:0000738!2.70e-10!140;CL:0000838!4.18e-10!52;CL:0000542!1.62e-09!53;CL:0000051!1.62e-09!53;CL:0002031!7.81e-07!124 | |ontology_enrichment_celltype=CL:0000037!8.16e-13!172;CL:0000566!8.16e-13!172;CL:0000988!3.49e-12!182;CL:0002032!2.02e-10!165;CL:0000837!2.02e-10!165;CL:0000738!2.70e-10!140;CL:0000838!4.18e-10!52;CL:0000542!1.62e-09!53;CL:0000051!1.62e-09!53;CL:0002031!7.81e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.62e-10;25!CL:0000791;4.70e-10;18!CL:0000789;4.70e-10;18!CL:0002419;4.70e-10;18!CL:0000624;1.85e-09;6!CL:0000542;5.52e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.47e-16,168;CL:0000988,6.86e-15,177;CL:0000838,2.58e-13,52;CL:0000738,5.10e-13,136;CL:0000542,6.53e-13,53;CL:0000051,6.53e-13,53;CL:0002032,3.63e-12,161;CL:0000837,3.63e-12,161;CL:0000084,9.97e-11,25;CL:0000827,9.97e-11,25;CL:0000791,2.23e-10,18;CL:0000789,2.23e-10,18;CL:0002420,2.23e-10,18;CL:0002419,2.23e-10,18;CL:0000790,2.23e-10,18;CL:0000624,1.05e-09,6;CL:0002087,2.94e-07,115;CL:0002031,3.34e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;4.70e-10;18!CL:0000051;5.52e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!2.67e-13!32;UBERON:0002780!4.80e-13!41;UBERON:0001890!4.80e-13!41;UBERON:0006240!4.80e-13!41;UBERON:0002020!8.53e-13!34;UBERON:0003528!8.53e-13!34;UBERON:0001893!2.52e-12!34;UBERON:0003080!3.10e-12!42;UBERON:0002791!3.56e-12!33;UBERON:0001049!5.18e-11!57;UBERON:0005068!5.18e-11!57;UBERON:0006241!5.18e-11!57;UBERON:0007135!5.18e-11!57;UBERON:0007023!6.61e-11!115;UBERON:0002619!7.65e-11!22;UBERON:0001950!4.99e-10!20;UBERON:0000956!5.00e-10!25;UBERON:0000203!5.00e-10!25;UBERON:0002616!1.64e-09!59;UBERON:0000073!1.14e-08!94;UBERON:0001016!1.14e-08!94;UBERON:0003056!6.41e-08!61;UBERON:0001017!9.34e-08!82;UBERON:0005743!1.06e-07!86;UBERON:0002346!5.15e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.38e-14;32!UBERON:0001869;3.34e-14;32!UBERON:0003528;1.25e-13;34!UBERON:0002020;1.25e-13;34!UBERON:0002619;1.43e-13;22!UBERON:0001950;8.55e-12;20!UBERON:0001893;1.04e-11;34!UBERON:0000956;1.90e-11;25!UBERON:0000203;1.90e-11;25!UBERON:0002780;4.11e-10;41!UBERON:0001890;4.11e-10;41!UBERON:0000369;7.46e-07;4!UBERON:0002435;7.46e-07;4!UBERON:0000204;7.46e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.05e-15,34;UBERON:0002020,1.05e-15,34;UBERON:0002791,1.34e-15,32;UBERON:0001869,1.34e-15,32;UBERON:0001893,2.51e-14,34;UBERON:0002619,1.52e-13,22;UBERON:0002780,2.85e-13,41;UBERON:0001890,2.85e-13,41;UBERON:0003080,2.85e-13,41;UBERON:0006240,2.85e-13,41;UBERON:0001950,7.63e-12,20;UBERON:0000956,1.99e-11,25;UBERON:0000203,1.99e-11,25;UBERON:0000073,1.04e-10,53;UBERON:0002616,1.04e-10,53;UBERON:0001049,9.09e-10,56;UBERON:0005068,9.09e-10,56;UBERON:0006241,9.09e-10,56;UBERON:0007135,9.09e-10,56;UBERON:0003056,1.93e-08,61;UBERON:0000369,5.49e-07,4;UBERON:0002435,5.49e-07,4;UBERON:0000204,5.49e-07,4;UBERON:0010082,5.49e-07,4 | |||
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|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,1.39560233594486,0.436882744260345,0.791300934685361,0,0,0.672325146451775,0,1.46062018077475,0,0.369363174230364,0.612002073732759,0,0,0.684372125364421,0.627713197974014,0.305653622991805,0.57470412614962,0.472264687882075,1.57345710739562,5.75744097145819,0.77408061658038,0,0,0,1.70427841276664,0.710846162437108,7.04641054403633,0,2.20598892217156,1.08505435357926,0.223915474239924,0.32389366601898,0,1.01778767145695,0.377875943688809,0.970336244751265,0.232429036905685,0.822335776043652,0,0.575384784644301,0,0,0,0,1.35426486594342,0.376484679085209,0,0.449446968890169,0,0.320929027076094,0.639337125799041,0.659702600373432,0.797854630486527,0.426224750532694,0,0,0,1.00499466102697,0.521482918420201,0.65156653411535,0.605399502633369,0,0.632924774881769,0,0.637812899895131,0,0.336985893439485,0.300353785683013,0.16072558669708,0.570025487482497,0.99458338599545,0.365328307529268,1.75996244461323,0.546138611262131,0.889509253863555,1.70692089026603,1.60158394814405,0,0,1.90810750907073,2.27685187643779,3.52342313622563,2.29363936875137,2.64342657158052,3.36305137788922,2.89722493252585,2.55722701147983,5.10913991573914,1.85041349099558,0.501559486172034,2.28145586643513,1.89379122293893,0,0.891283655081389,2.3568472597987,0.886135578334485,1.62482318259009,1.0247305578054,1.04047478047903,0.986627427622057,1.10540007114339,0.869409257205157,2.37258501059297,2.1403266247177,1.04535523804977,0.793165398882963,2.29932296161153,1.37450978193052,1.26509846009751,1.27426165729639,0,0,0.752875595388864,1.66382594500744,0,2.8413270245282,0,2.62088766192152,4.01160293675261,2.60683926989038,2.43806866313962,0,0,0,0.50133791063589,0.144846518960824,0.795285947051099,0,0.567208902984407,0,0.790513071238134,0.589405839739707,0.364295288292542,0.370784442784429,0,0.348259474598534,0.26591592103773,2.62339686735876,5.71994910780128,3.71457501329565,0.596287222100115,0,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0.35576626268671,0.66944122552934,0.402829317109147,0,0.488124115096339,0,0,0.267899184852239,0,0.337834441449967,0,0,0.183201743930407,1.31780417436063,0,0,0.496971951695318,0.379891534993739,0.397227542439656,0.573673241497627,0,0.560677600142307,0,0,0.311211035399766,0,0.326923806226917,0,0,0.234321431833797,0,0.570471821544449,0.298897361103602,0.23486899728753,0,0,0,0.122834317311768,0.103325781175765,0,0,0.910161361938026,0,0.168336113954066,0,0,0.438977620880838,0.30648779579902,0.45071417671979,0,1.07633781413317,0,0,0.300091096084402,0,0.772921620136887,0,1.18143432568886,0.389748020644795,0.252433774244115,0.368199594569197,0,1.06502877754984,0,0,0,0,0.286804595389004,0.853815942907168,1.19276791489337,0.580969714347592,0.518305275076852,0.504641701751257,1.09493207722749,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0.330881918197182,0,0.237270619111097,0.134831308160164,0,0,0,0,0.8231480226628,0,0,0,0.590789906681404,5.73902029239046,0.491953754172454,0.171567810298526,0.329250856225877,0,0.100528972411631,0,0,0,0,0.231860809950154,0.352226082707465,0.721832238805369,0.462985512576611,0.380508304469197,0,0,0,0,0.297262324577456,0,0.16798212819886,0.141775097242386,0,0,0,0,0.968532774145487,2.28060927094849,1.72943944100354,0.75745460055828,0,1.14596527667483,0,0,0.102827492703324,0,0,0.224262168690721,0,0.07333828582095,0,0,0.845302752556,0,0,0.257207374262142,0,0,0.57191197463259,0.542621605391443,0,0,0,0,0,0,0.299918973546171,0,0.502257091432126,2.10833939483032,0.239624855491583,1.14861935834114,0,0.144781306667579,0.205476322550383,0.179060963239896,0.336255431980582,3.94061520403854,6.46882724578552,4.62034930607094,1.01637849688985,0,0.773288812777695,0.670065061337395,1.27587750330633,0.749007023947182,0,1.24324654030811,0.12269149171914,0,0.271265023699736,0.623912584592421,0.178428988797162,0.473107245101804,0,0,0,0,0.664225598535437,0,0.260650843404249,0,0,0.620304078368662,1.94142780736755,2.02782359826544,0.606255142892519,1.66435439510497,0.30239029332968,0.248107807818777,0.306923946576125,0,0,0,0.482561763430822,1.48418066444991,0,0,0.328508624055237,0,0.232420756919918,0.483437798366489,0.200506470303285,0.0920809889358963,0,0,0.131124414959424,0,0.0770153371044148,0,0,0.316654886678627,0,0.510281115829547,0.215915916102139,0,0,0,0.254876273045038,0,0,0.219259876645935,0.261435451024901,0,1.64007322849853,0.325378394664303,0.206082023295445,0.457847324091717,0.742585499285292,0,0.650060246036521,1.6068392984416,0.193341436584244,0.308097234229289,0.15350367472613,0.551346289938122,0.429680979473094,0.145016693914229,0.170453254832202,0.356128142586949,0.165284915360978,0.576570202095319,0.638063562472921,0.50578890427775,0.464845549297286,0.62962469366128,0.6970372701606,0.616067160352178,0,0,0.37064843820784,0,0.372158369359667,0,0.190630193923825,0,0.855877976067841,0.636406495851874,0,0,0.823611089208164,0.235624804691373,0.404364963146632,0,0,0.975267478179181,0,0,0,0.424216295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| ||
|short_description=p8@ARID1B | |short_description=p8@ARID1B | ||
}} | }} |
Latest revision as of 09:53, 16 September 2015
Short description: | p8@ARID1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ARID1B_5end |
Coexpression cluster: | NA |
Association with transcript: | 301bp_to_ENST00000354354, ENST00000506048, ENST00000535255_5end |
EntrezGene: | ARID1B |
HGNC: | 18040 |
UniProt: | C9JZD6F5H333 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 6.47e-16 | 168 |
hematopoietic cell | 6.86e-15 | 177 |
lymphoid lineage restricted progenitor cell | 2.58e-13 | 52 |
leukocyte | 5.10e-13 | 136 |
lymphocyte | 6.53e-13 | 53 |
common lymphoid progenitor | 6.53e-13 | 53 |
hematopoietic oligopotent progenitor cell | 3.63e-12 | 161 |
hematopoietic multipotent progenitor cell | 3.63e-12 | 161 |
T cell | 9.97e-11 | 25 |
pro-T cell | 9.97e-11 | 25 |
mature alpha-beta T cell | 2.23e-10 | 18 |
alpha-beta T cell | 2.23e-10 | 18 |
immature T cell | 2.23e-10 | 18 |
mature T cell | 2.23e-10 | 18 |
immature alpha-beta T cell | 2.23e-10 | 18 |
CD4-positive, alpha-beta T cell | 1.05e-09 | 6 |
nongranular leukocyte | 2.94e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 3.34e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 1.05e-15 | 34 |
gray matter | 1.05e-15 | 34 |
regional part of telencephalon | 1.34e-15 | 32 |
cerebral hemisphere | 1.34e-15 | 32 |
telencephalon | 2.51e-14 | 34 |
regional part of cerebral cortex | 1.52e-13 | 22 |
regional part of forebrain | 2.85e-13 | 41 |
forebrain | 2.85e-13 | 41 |
anterior neural tube | 2.85e-13 | 41 |
future forebrain | 2.85e-13 | 41 |
neocortex | 7.63e-12 | 20 |
cerebral cortex | 1.99e-11 | 25 |
pallium | 1.99e-11 | 25 |
regional part of nervous system | 1.04e-10 | 53 |
regional part of brain | 1.04e-10 | 53 |
neural tube | 9.09e-10 | 56 |
neural rod | 9.09e-10 | 56 |
future spinal cord | 9.09e-10 | 56 |
neural keel | 9.09e-10 | 56 |
pre-chordal neural plate | 1.93e-08 | 61 |
corpus striatum | 5.49e-07 | 4 |
striatum | 5.49e-07 | 4 |
ventral part of telencephalon | 5.49e-07 | 4 |
future corpus striatum | 5.49e-07 | 4 |