FFCP PHASE1:Hg19::chr20:62371206..62371224,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56731 | |EntrezGene=56731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15930 | |HGNC=15930 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NR83 | |UniProt=Q9NR83 | ||
|association_with_transcript=0bp_to_ENST00000266077,NM_020062,uc002ygq.2_5end | |association_with_transcript=0bp_to_ENST00000266077,NM_020062,uc002ygq.2_5end | ||
|cluster_id=chr20:62371206..62371224,+ | |||
|coexpression_cluster_id=C193 | |||
|description=CAGE_peak_6_at_SLC2A4RG_5end | |description=CAGE_peak_6_at_SLC2A4RG_5end | ||
|id=chr20:62371206..62371224,+ | |id=chr20:62371206..62371224,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.26e-17!254;CL:0000220!1.31e-12!246;CL:0002321!2.03e-12!248;CL:0000222!9.54e-11!119;CL:0000223!4.50e-08!59 | |ontology_enrichment_celltype=CL:0000066!1.26e-17!254;CL:0000220!1.31e-12!246;CL:0002321!2.03e-12!248;CL:0000222!9.54e-11!119;CL:0000223!4.50e-08!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.05e-12,253;CL:0002321,2.25e-10,250;CL:0000222,1.45e-09,121;CL:0000223,6.03e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!2.70e-17!238;UBERON:0009142!2.70e-17!238;UBERON:0002100!1.03e-15!216;UBERON:0000490!1.13e-14!138;UBERON:0004119!1.00e-13!169;UBERON:0000925!1.00e-13!169;UBERON:0006595!1.00e-13!169;UBERON:0005256!1.16e-12!143;UBERON:0001007!6.96e-11!155;UBERON:0001555!6.96e-11!155;UBERON:0007026!6.96e-11!155;UBERON:0000077!1.19e-10!130;UBERON:0000481!1.01e-09!347;UBERON:0005177!1.38e-09!107;UBERON:0004921!1.71e-09!129;UBERON:0004185!1.71e-09!129;UBERON:0003914!2.73e-09!118;UBERON:0000475!4.63e-09!365;UBERON:0009569!1.50e-08!113;UBERON:0001041!4.14e-08!98;UBERON:0000926!3.85e-07!448;UBERON:0004120!3.85e-07!448;UBERON:0006603!3.85e-07!448;UBERON:0005172!5.33e-07!55;UBERON:0005173!5.33e-07!55;UBERON:0000466!6.48e-07!126;UBERON:0000486!7.65e-07!82;UBERON:0000119!7.82e-07!312;UBERON:0001134!8.47e-07!61;UBERON:0002036!8.47e-07!61;UBERON:0003082!8.47e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.28e-14,199;UBERON:0000490,3.19e-14,148;UBERON:0005256,8.56e-12,122;UBERON:0004119,6.43e-11,160;UBERON:0000925,6.43e-11,160;UBERON:0006595,6.43e-11,160;UBERON:0003104,8.60e-11,160;UBERON:0009142,8.60e-11,160;UBERON:0005177,1.47e-08,101;UBERON:0001007,2.17e-08,145;UBERON:0001555,2.17e-08,145;UBERON:0007026,2.17e-08,145;UBERON:0004921,8.61e-08,118;UBERON:0003914,1.67e-07,117;UBERON:0007503,2.37e-07,78;UBERON:0001041,2.44e-07,87;UBERON:0001134,3.54e-07,62;UBERON:0002036,3.54e-07,62;UBERON:0003082,3.54e-07,62;UBERON:0002329,9.61e-07,71;UBERON:0003059,9.61e-07,71;UBERON:0007282,9.61e-07,71;UBERON:0004290,9.61e-07,71;UBERON:0009618,9.61e-07,71;UBERON:0000486,9.64e-07,83 | |||
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| ||
|short_description=p6@SLC2A4RG | |short_description=p6@SLC2A4RG | ||
}} | }} |
Latest revision as of 14:11, 17 September 2015
Short description: | p6@SLC2A4RG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SLC2A4RG_5end |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | 0bp_to_ENST00000266077, NM_020062, uc002ygq.2_5end |
EntrezGene: | SLC2A4RG |
HGNC: | 15930 |
UniProt: | Q9NR83 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.05e-12 | 253 |
embryonic cell | 2.25e-10 | 250 |
mesodermal cell | 1.45e-09 | 121 |
endodermal cell | 6.03e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.28e-14 | 199 |
unilaminar epithelium | 3.19e-14 | 148 |
trunk mesenchyme | 8.56e-12 | 122 |
endoderm-derived structure | 6.43e-11 | 160 |
endoderm | 6.43e-11 | 160 |
presumptive endoderm | 6.43e-11 | 160 |
mesenchyme | 8.60e-11 | 160 |
entire embryonic mesenchyme | 8.60e-11 | 160 |
trunk region element | 1.47e-08 | 101 |
digestive system | 2.17e-08 | 145 |
digestive tract | 2.17e-08 | 145 |
primitive gut | 2.17e-08 | 145 |
subdivision of digestive tract | 8.61e-08 | 118 |
epithelial tube | 1.67e-07 | 117 |
epithelial vesicle | 2.37e-07 | 78 |
foregut | 2.44e-07 | 87 |
skeletal muscle tissue | 3.54e-07 | 62 |
striated muscle tissue | 3.54e-07 | 62 |
myotome | 3.54e-07 | 62 |
somite | 9.61e-07 | 71 |
presomitic mesoderm | 9.61e-07 | 71 |
presumptive segmental plate | 9.61e-07 | 71 |
dermomyotome | 9.61e-07 | 71 |
trunk paraxial mesoderm | 9.61e-07 | 71 |
multilaminar epithelium | 9.64e-07 | 83 |