FFCP PHASE1:Hg19::chr13:86373476..86373501,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:86373476..86373501,-
|short_description=p4@SLITRK6
|description=CAGE_peak_4_at_SLITRK6_5end
|association_with_transcript=0bp_to_NM_032229,uc001vll.1_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84189 | |EntrezGene=84189 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23503 | |HGNC=23503 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H5Y7 | |UniProt=Q9H5Y7 | ||
|association_with_transcript=0bp_to_NM_032229,uc001vll.1_5end | |||
|cluster_id=chr13:86373476..86373501,- | |||
|coexpression_cluster_id=C1710 | |||
|description=CAGE_peak_4_at_SLITRK6_5end | |||
|id=chr13:86373476..86373501,- | |||
|ontology_enrichment_celltype=CL:0002076!1.11e-10!43;CL:0000223!1.54e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.41e-13;19!CL:0002076;2.10e-08;42!CL:0002541;4.67e-08;3!CL:0002577;1.54e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.85e-13,19;CL:0002076,2.24e-09,42;CL:0002541,5.41e-08,3;CL:0000223,9.95e-08,58;CL:0002577,1.77e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1749;4.50e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.63e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.44e-15!169;UBERON:0000925!5.44e-15!169;UBERON:0006595!5.44e-15!169;UBERON:0005631!2.67e-11!14;UBERON:0000158!2.67e-11!14;UBERON:0001007!9.14e-11!155;UBERON:0001555!9.14e-11!155;UBERON:0007026!9.14e-11!155;UBERON:0003124!2.57e-08!7;UBERON:0000077!3.33e-08!130;UBERON:0004921!6.51e-08!129;UBERON:0004185!6.51e-08!129;UBERON:0001004!7.74e-08!72;UBERON:0005153!1.46e-07!37;UBERON:0009663!2.91e-07!7;UBERON:0000924!6.90e-07!173;UBERON:0006601!6.90e-07!173;UBERON:0000062!7.53e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.36e-15;10!UBERON:0000158;2.36e-15;10!UBERON:0000478;3.04e-14;24!UBERON:0000305;2.57e-09;7!UBERON:0001987;2.72e-09;4!UBERON:0003124;4.67e-08;3!UBERON:0000920;4.67e-08;3!UBERON:0005383;1.96e-07;3!UBERON:0005382;1.96e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.54e-22,14;UBERON:0000158,1.54e-22,14;UBERON:0003124,2.24e-15,7;UBERON:0000478,4.88e-14,24;UBERON:0004119,4.64e-13,160;UBERON:0000925,4.64e-13,160;UBERON:0006595,4.64e-13,160;UBERON:0000305,2.98e-09,7;UBERON:0001004,3.89e-09,74;UBERON:0001987,4.47e-09,4;UBERON:0004340,4.47e-09,4;UBERON:0004871,4.99e-08,8;UBERON:0000920,5.41e-08,3;UBERON:0005383,1.09e-07,3;UBERON:0005382,1.09e-07,3;UBERON:0001007,1.39e-07,145;UBERON:0001555,1.39e-07,145;UBERON:0007026,1.39e-07,145 | |||
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| ||
|short_description=p4@SLITRK6 | |||
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Latest revision as of 03:32, 18 September 2015
Short description: | p4@SLITRK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLITRK6_5end |
Coexpression cluster: | C1710_Placental_endometrial_amniotic_smallcell_leiomyoblastoma_pineal_malignant |
Association with transcript: | 0bp_to_NM_032229, uc001vll.1_5end |
EntrezGene: | SLITRK6 |
HGNC: | 23503 |
UniProt: | Q9H5Y7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.85e-13 | 19 |
endo-epithelial cell | 2.24e-09 | 42 |
chorionic membrane mesenchymal stem cell | 5.41e-08 | 3 |
endodermal cell | 9.95e-08 | 58 |
placental epithelial cell | 1.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.54e-22 | 14 |
membranous layer | 1.54e-22 | 14 |
chorion | 2.24e-15 | 7 |
extraembryonic structure | 4.88e-14 | 24 |
endoderm-derived structure | 4.64e-13 | 160 |
endoderm | 4.64e-13 | 160 |
presumptive endoderm | 4.64e-13 | 160 |
amnion | 2.98e-09 | 7 |
respiratory system | 3.89e-09 | 74 |
placenta | 4.47e-09 | 4 |
allantois | 4.47e-09 | 4 |
somatic layer of lateral plate mesoderm | 4.99e-08 | 8 |
egg chorion | 5.41e-08 | 3 |
caudate-putamen | 1.09e-07 | 3 |
dorsal striatum | 1.09e-07 | 3 |
digestive system | 1.39e-07 | 145 |
digestive tract | 1.39e-07 | 145 |
primitive gut | 1.39e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.63e-09 | 14 |