FFCP PHASE1:Hg19::chr2:11052080..11052117,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3754 | |EntrezGene=3754 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6246 | |HGNC=6246 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H3M0 | |UniProt=Q9H3M0 | ||
|association_with_transcript=17bp_to_ENST00000295082,NM_002236,uc002rax.2_5end | |association_with_transcript=17bp_to_ENST00000295082,NM_002236,uc002rax.2_5end | ||
|cluster_id=chr2:11052080..11052117,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_KCNF1_5end | |description=CAGE_peak_1_at_KCNF1_5end | ||
|id=chr2:11052080..11052117,+ | |id=chr2:11052080..11052117,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.66e-08!25;CL:0000047!1.19e-07!8 | |ontology_enrichment_celltype=CL:0002319!1.66e-08!25;CL:0000047!1.19e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.94e-10;25!CL:0000128;1.11e-07;7!CL:0000126;1.11e-07;7!CL:0000127;1.11e-07;7!CL:0000540;5.87e-07;6!CL:0000404;5.87e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.59e-10,25;CL:0000047,3.52e-10,8;CL:0000128,8.20e-08,7;CL:0000126,8.20e-08,7;CL:0000127,8.20e-08,7;CL:0002453,8.20e-08,7;CL:0000540,6.41e-07,6;CL:0000031,6.41e-07,6;CL:0000404,6.41e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.14e-10;82!CL:0000031;5.87e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;5.96e-44;34!UBERON:0001869;9.76e-44;32!UBERON:0002791;3.09e-43;32!UBERON:0003528;6.67e-41;34!UBERON:0002020;6.67e-41;34!UBERON:0002780;1.60e-38;41!UBERON:0001890;1.60e-38;41!UBERON:0000956;1.72e-37;25!UBERON:0000203;1.72e-37;25!UBERON:0000073;2.41e-35;53!UBERON:0002616;2.41e-35;53!UBERON:0002619;2.35e-33;22!UBERON:0001950;2.03e-30;20!UBERON:0000955;1.05e-26;68!UBERON:0001017;3.33e-26;75!UBERON:0001016;1.89e-21;83!UBERON:0002420;1.45e-14;9!UBERON:0007245;1.45e-14;9!UBERON:0010009;1.45e-14;9!UBERON:0010011;1.45e-14;9!UBERON:0000454;1.45e-14;9!UBERON:0009663;1.34e-11;7!UBERON:0000125;5.95e-11;9!UBERON:0002308;5.95e-11;9!UBERON:0000200;5.96e-11;6!UBERON:0011216;3.68e-10;132!UBERON:0002021;2.96e-09;5!UBERON:0001872;3.30e-09;5!UBERON:0000349;3.90e-09;5!UBERON:0001871;3.93e-09;6!UBERON:0004733;1.85e-08;12!UBERON:0002028;1.85e-08;12!UBERON:0000369;5.14e-08;4!UBERON:0002435;5.14e-08;4!UBERON:0000204;5.14e-08;4!UBERON:0004732;1.14e-07;13!UBERON:0002784;7.83e-07;4 | |||
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| ||
|short_description=p1@KCNF1 | |short_description=p1@KCNF1 | ||
}} | }} |
Latest revision as of 07:32, 16 September 2015
Short description: | p1@KCNF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNF1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 17bp_to_ENST00000295082, NM_002236, uc002rax.2_5end |
EntrezGene: | KCNF1 |
HGNC: | 6246 |
UniProt: | Q9H3M0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.59e-10 | 25 |
neuronal stem cell | 3.52e-10 | 8 |
oligodendrocyte | 8.20e-08 | 7 |
macroglial cell | 8.20e-08 | 7 |
astrocyte | 8.20e-08 | 7 |
oligodendrocyte precursor cell | 8.20e-08 | 7 |
neuron | 6.41e-07 | 6 |
neuroblast | 6.41e-07 | 6 |
electrically signaling cell | 6.41e-07 | 6 |