FFCP PHASE1:Hg19::chr7:96635448..96635470,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1750 | |EntrezGene=1750 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2919 | |HGNC=2919 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-334bp_to_ENST00000493273_5end | |association_with_transcript=-334bp_to_ENST00000493273_5end | ||
|cluster_id=chr7:96635448..96635470,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_5_at_DLX6_5end | |description=CAGE_peak_5_at_DLX6_5end | ||
|id=chr7:96635448..96635470,+ | |id=chr7:96635448..96635470,+ | ||
|ontology_enrichment_celltype=CL:0000062!3.87e-10!11;CL:0000375!3.87e-10!11;CL:0000335!3.87e-10!11;CL:0000035!1.07e-07!20 | |ontology_enrichment_celltype=CL:0000062!3.87e-10!11;CL:0000375!3.87e-10!11;CL:0000335!3.87e-10!11;CL:0000035!1.07e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0000062;9.94e-16;9!CL:0000123;6.46e-07;2!CL:0000242;6.46e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,1.78e-12,11;CL:0000375,1.78e-12,11;CL:0000335,1.78e-12,11;CL:0000242,6.89e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000335;1.14e-12;11!UBERON:0010122;7.56e-08;2 | |||
|ontology_enrichment_disease=DOID:0050687!8.48e-17!143;DOID:305!9.84e-15!106;DOID:162!3.01e-12!235;DOID:14566!6.01e-12!239;DOID:3095!9.86e-09!22;DOID:2994!9.86e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;9.15e-10;22!DOID:2994;9.15e-10;22!DOID:169;9.96e-09;6!DOID:5409;2.92e-07;4!DOID:1325;7.23e-07;7!DOID:3904;7.23e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.87e-12,143;DOID:3095,8.71e-10,22;DOID:2994,8.71e-10,22;DOID:162,2.04e-09,235;DOID:14566,4.94e-09,239;DOID:169,8.12e-09,6;DOID:305,5.66e-08,106;DOID:5409,2.72e-07,4;DOID:1325,6.54e-07,7;DOID:3904,6.54e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001869!4.55e-15!32;UBERON:0002780!5.82e-15!41;UBERON:0001890!5.82e-15!41;UBERON:0006240!5.82e-15!41;UBERON:0001893!6.11e-15!34;UBERON:0002791!1.97e-14!33;UBERON:0003080!2.14e-14!42;UBERON:0002020!1.20e-12!34;UBERON:0003528!1.20e-12!34;UBERON:0001950!8.79e-11!20;UBERON:0002619!1.41e-10!22;UBERON:0001049!8.94e-10!57;UBERON:0005068!8.94e-10!57;UBERON:0006241!8.94e-10!57;UBERON:0007135!8.94e-10!57;UBERON:0000073!1.28e-09!94;UBERON:0001016!1.28e-09!94;UBERON:0000955!1.58e-09!69;UBERON:0006238!1.58e-09!69;UBERON:0002616!3.69e-09!59;UBERON:0003056!4.11e-09!61;UBERON:0001017!5.41e-09!82;UBERON:0000956!8.95e-09!25;UBERON:0000203!8.95e-09!25;UBERON:0005743!4.05e-08!86;UBERON:0000033!5.93e-08!123;UBERON:0000153!6.73e-08!129;UBERON:0007811!6.73e-08!129;UBERON:0004121!1.39e-07!169;UBERON:0000924!1.80e-07!173;UBERON:0006601!1.80e-07!173;UBERON:0009663!1.86e-07!7;UBERON:0005910!3.78e-07!6;UBERON:0002420!7.44e-07!9;UBERON:0007245!7.44e-07!9;UBERON:0010009!7.44e-07!9;UBERON:0010011!7.44e-07!9;UBERON:0000454!7.44e-07!9;UBERON:0007023!9.36e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0009663;2.44e-16;7!UBERON:0000369;1.00e-13;4!UBERON:0002435;1.00e-13;4!UBERON:0000204;1.00e-13;4!UBERON:0002420;1.58e-12;9!UBERON:0000125;1.58e-12;9!UBERON:0007245;1.58e-12;9!UBERON:0002308;1.58e-12;9!UBERON:0010009;1.58e-12;9!UBERON:0010011;1.58e-12;9!UBERON:0000454;1.58e-12;9!UBERON:0005383;6.13e-11;3!UBERON:0005382;6.13e-11;3!UBERON:0001873;7.56e-08;2!UBERON:0002791;2.83e-07;32!UBERON:0001875;3.53e-07;2!UBERON:0006514;3.53e-07;2!UBERON:0001869;5.30e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009663,2.41e-16,7;UBERON:0000369,1.15e-13,4;UBERON:0002435,1.15e-13,4;UBERON:0000204,1.15e-13,4;UBERON:0010082,1.15e-13,4;UBERON:0002420,1.56e-12,9;UBERON:0000125,1.56e-12,9;UBERON:0007245,1.56e-12,9;UBERON:0002308,1.56e-12,9;UBERON:0010009,1.56e-12,9;UBERON:0010011,1.56e-12,9;UBERON:0000454,1.56e-12,9;UBERON:0005383,6.18e-11,3;UBERON:0005382,6.18e-11,3;UBERON:0001873,7.60e-08,2;UBERON:0010122,7.60e-08,2;UBERON:0002791,2.95e-07,32;UBERON:0001869,2.95e-07,32;UBERON:0001875,3.04e-07,2;UBERON:0006514,3.04e-07,2;UBERON:0003528,9.89e-07,34;UBERON:0002020,9.89e-07,34;UBERON:0001893,9.89e-07,34 | |||
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| ||
|short_description=p5@DLX6 | |short_description=p5@DLX6 | ||
}} | }} |
Latest revision as of 06:01, 20 September 2015
Short description: | p5@DLX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DLX6_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -334bp_to_ENST00000493273_5end |
EntrezGene: | DLX6 |
HGNC: | 2919 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 1.78e-12 | 11 |
osteoprogenitor cell | 1.78e-12 | 11 |
mesenchyme condensation cell | 1.78e-12 | 11 |
Merkel cell | 6.89e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
telencephalic nucleus | 2.41e-16 | 7 |
corpus striatum | 1.15e-13 | 4 |
striatum | 1.15e-13 | 4 |
ventral part of telencephalon | 1.15e-13 | 4 |
future corpus striatum | 1.15e-13 | 4 |
basal ganglion | 1.56e-12 | 9 |
neural nucleus | 1.56e-12 | 9 |
nuclear complex of neuraxis | 1.56e-12 | 9 |
nucleus of brain | 1.56e-12 | 9 |
aggregate regional part of brain | 1.56e-12 | 9 |
collection of basal ganglia | 1.56e-12 | 9 |
cerebral subcortex | 1.56e-12 | 9 |
caudate-putamen | 6.18e-11 | 3 |
dorsal striatum | 6.18e-11 | 3 |
caudate nucleus | 7.60e-08 | 2 |
future caudate nucleus | 7.60e-08 | 2 |
regional part of telencephalon | 2.95e-07 | 32 |
cerebral hemisphere | 2.95e-07 | 32 |
globus pallidus | 3.04e-07 | 2 |
pallidum | 3.04e-07 | 2 |
brain grey matter | 9.89e-07 | 34 |
gray matter | 9.89e-07 | 34 |
telencephalon | 9.89e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.87e-12 | 143 |
germ cell and embryonal cancer | 8.71e-10 | 22 |
germ cell cancer | 8.71e-10 | 22 |
cancer | 2.04e-09 | 235 |
disease of cellular proliferation | 4.94e-09 | 239 |
neuroendocrine tumor | 8.12e-09 | 6 |
carcinoma | 5.66e-08 | 106 |
lung small cell carcinoma | 2.72e-07 | 4 |
bronchus cancer | 6.54e-07 | 7 |
bronchogenic carcinoma | 6.54e-07 | 7 |