FFCP PHASE1:Hg19::chr2:204398121..204398132,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65059 | |EntrezGene=65059 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14436 | |HGNC=14436 | ||
|TSSclassifier=strong | |||
|UniProt=C9JLG4 | |UniProt=C9JLG4 | ||
|association_with_transcript=23bp_to_ENST00000428637_5end | |association_with_transcript=23bp_to_ENST00000428637_5end | ||
|cluster_id=chr2:204398121..204398132,- | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_18_at_RAPH1_5end | |description=CAGE_peak_18_at_RAPH1_5end | ||
|id=chr2:204398121..204398132,- | |id=chr2:204398121..204398132,- | ||
|ontology_enrichment_celltype=CL:0000667!8.50e-11!6;CL:0000058!8.50e-11!6;CL:0000138!8.50e-11!6;CL:0000153!1.03e-09!9;CL:0000447!1.03e-09!9;CL:0000453!1.28e-08!5 | |ontology_enrichment_celltype=CL:0000667!8.50e-11!6;CL:0000058!8.50e-11!6;CL:0000138!8.50e-11!6;CL:0000153!1.03e-09!9;CL:0000447!1.03e-09!9;CL:0000453!1.28e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.29e-26;2!CL:0001016;1.29e-26;2!CL:0000453;2.20e-23;5!CL:0000222;1.10e-13;1!CL:0000990;2.79e-13;8!CL:0000451;5.70e-11;10!CL:0000840;1.61e-09;5!CL:0000138;3.56e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.29e-26,2;CL:0001016,1.29e-26,2;CL:0000453,1.63e-23,5;CL:0000990,2.37e-13,8;CL:0000451,4.98e-11,10;CL:0000840,1.61e-09,5;CL:0001029,1.61e-09,5;CL:0000058,3.42e-09,6;CL:0000138,3.42e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.53e-14;1!UBERON:0005425;1.10e-13;1!UBERON:0004872;5.47e-08;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.11e-17;3!UBERON:0000941;1.10e-13;1!UBERON:0001785;1.10e-13;1!UBERON:0002464;1.10e-13;1!UBERON:0004904;1.10e-13;1!UBERON:0001021;1.10e-13;1!UBERON:0004177;7.88e-11;5!UBERON:0005057;7.88e-11;5!UBERON:0003714;1.75e-07;2!UBERON:0005162;1.75e-07;2!UBERON:0000122;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.64e-17,3;UBERON:0004854,1.64e-17,3;UBERON:0009034,1.64e-17,3;UBERON:0002095,1.64e-17,3;UBERON:0004782,1.64e-17,3;UBERON:0003281,1.64e-17,3;UBERON:0009664,1.64e-17,3;UBERON:0002296,1.64e-17,3;UBERON:0005602,1.64e-17,3;UBERON:0001179,1.64e-17,3;UBERON:0006293,1.64e-17,3;UBERON:0000941,9.73e-14,1;UBERON:0001785,9.73e-14,1;UBERON:0002464,9.73e-14,1;UBERON:0004904,9.73e-14,1;UBERON:0001021,9.73e-14,1;UBERON:0003902,9.73e-14,1;UBERON:0005425,9.73e-14,1;UBERON:0003887,8.02e-10,12;UBERON:0004177,4.92e-08,7;UBERON:0005057,4.92e-08,7;UBERON:0003714,1.64e-07,2;UBERON:0005162,1.64e-07,2;UBERON:0000122,1.64e-07,2;UBERON:0000945,3.90e-07,8;UBERON:0010039,3.90e-07,8 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0.50133791063589,1.30361867064741,1.5905718941022,0.486634870302636,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,1.24484414159907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0,0,0.211931901159562,0,0.206105058476878,0.257640540045629,0.18611685633159,0,0,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.301439377059586,0,0.699810938274399,0,0,0,0,0,0,0.723906533337896,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0.485560759068186,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353024506766001,0.225980740780532,0.137041924646751,0,0.189932387867636,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2734596015385,9.2856234546954,0,0,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0.378806010550178,0,0,0.457680136793847,0.756154618816195,0,0,0,0,0,0,0,0,0.300515217994437,1.14241563650639,0,0,0,0,0.398095888698616,0,0,0,1.26184898228651,0,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0,0,0,0,1.94860308839388,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,1.4097587696978,1.61144719933943,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,2.34640942403454,0,0,0,0.201273793591026,0 | ||
|short_description=p18@RAPH1 | |short_description=p18@RAPH1 | ||
}} | }} |
Latest revision as of 15:52, 19 September 2015
Short description: | p18@RAPH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_RAPH1_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 23bp_to_ENST00000428637_5end |
EntrezGene: | RAPH1 |
HGNC: | 14436 |
UniProt: | C9JLG4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.29e-26 | 2 |
immature CD1a-positive Langerhans cell | 1.29e-26 | 2 |
Langerhans cell | 1.63e-23 | 5 |
conventional dendritic cell | 2.37e-13 | 8 |
dendritic cell | 4.98e-11 | 10 |
immature conventional dendritic cell | 1.61e-09 | 5 |
common dendritic progenitor | 1.61e-09 | 5 |
chondroblast | 3.42e-09 | 6 |
chondrocyte | 3.42e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.64e-17 | 3 |
gastrointestinal system mesentery | 1.64e-17 | 3 |
stomach region | 1.64e-17 | 3 |
mesentery | 1.64e-17 | 3 |
gastrointestinal system serosa | 1.64e-17 | 3 |
mesentery of stomach | 1.64e-17 | 3 |
gut mesentery | 1.64e-17 | 3 |
dorsal mesentery | 1.64e-17 | 3 |
dorsal mesogastrium | 1.64e-17 | 3 |
peritoneal cavity | 1.64e-17 | 3 |
spleen primordium | 1.64e-17 | 3 |
cranial nerve II | 9.73e-14 | 1 |
cranial nerve | 9.73e-14 | 1 |
nerve trunk | 9.73e-14 | 1 |
nerve connecting eye with brain | 9.73e-14 | 1 |
nerve | 9.73e-14 | 1 |
retinal neural layer | 9.73e-14 | 1 |
presumptive neural retina | 9.73e-14 | 1 |
intraembryonic coelom | 8.02e-10 | 12 |
hemopoietic organ | 4.92e-08 | 7 |
immune organ | 4.92e-08 | 7 |
neural tissue | 1.64e-07 | 2 |
multi cell component structure | 1.64e-07 | 2 |
neuron projection bundle | 1.64e-07 | 2 |
stomach | 3.90e-07 | 8 |
food storage organ | 3.90e-07 | 8 |