FFCP PHASE1:Hg19::chr2:29297395..29297402,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388939 | |EntrezGene=388939 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34383 | |HGNC=34383 | ||
|TSSclassifier=strong | |||
|UniProt=A6NGG8 | |UniProt=A6NGG8 | ||
|association_with_transcript=-268bp_to_ENST00000331664,NM_001029883,uc002rmt.1_5end | |association_with_transcript=-268bp_to_ENST00000331664,NM_001029883,uc002rmt.1_5end | ||
|cluster_id=chr2:29297395..29297402,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_4_at_C2orf71_5end | |description=CAGE_peak_4_at_C2orf71_5end | ||
|id=chr2:29297395..29297402,- | |id=chr2:29297395..29297402,- | ||
|ontology_enrichment_celltype=CL:0002586!2.79e-07!3 | |ontology_enrichment_celltype=CL:0002586!2.79e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.89e-53;3 | |||
|ontology_enrichment_disease=DOID:3093!5.47e-07!11 | |ontology_enrichment_disease=DOID:3093!5.47e-07!11 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.89e-37!2;UBERON:0002757!1.89e-37!2;UBERON:0010134!1.89e-37!2;UBERON:0002784!1.89e-37!2;UBERON:0005408!1.89e-37!2;UBERON:0001899!1.89e-37!2;UBERON:0000966!4.31e-33!5;UBERON:0005388!4.31e-33!5;UBERON:0001802!4.31e-33!5;UBERON:0002079!2.25e-19!1;UBERON:0003296!2.71e-19!4;UBERON:0010133!2.71e-19!4;UBERON:0002372!4.69e-19!1;UBERON:0001961!4.69e-19!1;UBERON:0001744!4.69e-19!1;UBERON:0001735!4.69e-19!1;UBERON:0000970!6.91e-15!20;UBERON:0002104!3.39e-14!21;UBERON:0000020!5.40e-13!23;UBERON:0001032!1.81e-12!24;UBERON:0004456!1.81e-12!24;UBERON:0001894!1.87e-11!7;UBERON:0006222!1.87e-11!7;UBERON:0003056!2.21e-10!61;UBERON:0002081!2.27e-10!2;UBERON:0001870!3.58e-10!2;UBERON:0005743!9.43e-10!86;UBERON:0000019!3.24e-09!19;UBERON:0000047!3.24e-09!19;UBERON:0004088!3.24e-09!19;UBERON:0003072!3.24e-09!19;UBERON:0003071!3.24e-09!19;UBERON:0004128!3.24e-09!19;UBERON:0000073!8.21e-09!94;UBERON:0001016!8.21e-09!94;UBERON:0000033!9.22e-09!123;UBERON:0001456!2.16e-08!21;UBERON:0000153!2.46e-08!129;UBERON:0007811!2.46e-08!129;UBERON:0003075!2.42e-07!86;UBERON:0007284!2.42e-07!86;UBERON:0004151!2.47e-07!3;UBERON:0001781!2.79e-07!3;UBERON:0001782!2.79e-07!3;UBERON:0005424!2.79e-07!3;UBERON:0002346!5.21e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.34e-79;2!UBERON:0002757;2.34e-79;2!UBERON:0010134;2.34e-79;2!UBERON:0005408;2.34e-79;2!UBERON:0001899;2.34e-79;2!UBERON:0003296;2.22e-40;4!UBERON:0010133;2.22e-40;4!UBERON:0002784;2.22e-40;4!UBERON:0000966;2.34e-32;5!UBERON:0005388;2.34e-32;5!UBERON:0001802;2.34e-32;5!UBERON:0001894;1.28e-23;7!UBERON:0000970;1.42e-18;20!UBERON:0002104;9.85e-18;21!UBERON:0000020;2.85e-16;23!UBERON:0001032;1.25e-15;24!UBERON:0004456;1.25e-15;24!UBERON:0000019;2.46e-09;19!UBERON:0000047;2.46e-09;19!UBERON:0004088;2.46e-09;19!UBERON:0010230;2.46e-09;19!UBERON:0001456;1.53e-08;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.34e-79,2;UBERON:0002757,2.34e-79,2;UBERON:0010134,2.34e-79,2;UBERON:0005408,2.34e-79,2;UBERON:0001899,2.34e-79,2;UBERON:0003296,2.22e-40,4;UBERON:0010133,2.22e-40,4;UBERON:0002784,2.22e-40,4;UBERON:0000966,3.55e-27,6;UBERON:0005388,3.55e-27,6;UBERON:0001802,3.55e-27,6;UBERON:0001894,1.28e-23,7;UBERON:0006222,1.28e-23,7;UBERON:0000970,9.85e-18,21;UBERON:0002104,9.85e-18,21;UBERON:0000020,1.25e-15,24;UBERON:0001032,1.25e-15,24;UBERON:0004456,1.25e-15,24;UBERON:0003056,6.84e-11,61;UBERON:0000019,6.42e-09,20;UBERON:0000047,6.42e-09,20;UBERON:0010312,6.42e-09,20;UBERON:0004088,6.42e-09,20;UBERON:0010230,6.42e-09,20;UBERON:0003072,6.42e-09,20;UBERON:0004128,6.42e-09,20;UBERON:0003071,6.42e-09,20;UBERON:0003075,2.69e-08,82;UBERON:0007284,2.69e-08,82;UBERON:0001456,3.39e-08,22;UBERON:0002346,6.09e-08,86 | |||
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|short_description=p4@C2orf71 | |short_description=p4@C2orf71 | ||
}} | }} |
Latest revision as of 20:25, 16 September 2015
Short description: | p4@C2orf71 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C2orf71_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -268bp_to_ENST00000331664, NM_001029883, uc002rmt.1_5end |
EntrezGene: | C2orf71 |
HGNC: | 34383 |
UniProt: | A6NGG8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.34e-79 | 2 |
regional part of epithalamus | 2.34e-79 | 2 |
secretory circumventricular organ | 2.34e-79 | 2 |
circumventricular organ | 2.34e-79 | 2 |
epithalamus | 2.34e-79 | 2 |
gland of diencephalon | 2.22e-40 | 4 |
neuroendocrine gland | 2.22e-40 | 4 |
regional part of diencephalon | 2.22e-40 | 4 |
retina | 3.55e-27 | 6 |
photoreceptor array | 3.55e-27 | 6 |
posterior segment of eyeball | 3.55e-27 | 6 |
diencephalon | 1.28e-23 | 7 |
future diencephalon | 1.28e-23 | 7 |
eye | 9.85e-18 | 21 |
visual system | 9.85e-18 | 21 |
sense organ | 1.25e-15 | 24 |
sensory system | 1.25e-15 | 24 |
entire sense organ system | 1.25e-15 | 24 |
pre-chordal neural plate | 6.84e-11 | 61 |
camera-type eye | 6.42e-09 | 20 |
simple eye | 6.42e-09 | 20 |
immature eye | 6.42e-09 | 20 |
ocular region | 6.42e-09 | 20 |
eyeball of camera-type eye | 6.42e-09 | 20 |
optic cup | 6.42e-09 | 20 |
optic vesicle | 6.42e-09 | 20 |
eye primordium | 6.42e-09 | 20 |
neural plate | 2.69e-08 | 82 |
presumptive neural plate | 2.69e-08 | 82 |
face | 3.39e-08 | 22 |
neurectoderm | 6.09e-08 | 86 |