FFCP PHASE1:Hg19::chr14:65170917..65170935,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:65170917..65170935,+
|short_description=p5@PLEKHG3
|description=CAGE_peak_5_at_PLEKHG3_5end
|association_with_transcript=-218bp_to_ENST00000247226_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26030 | |EntrezGene=26030 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20364 | |HGNC=20364 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-218bp_to_ENST00000247226_5end | |||
|cluster_id=chr14:65170917..65170935,+ | |||
|coexpression_cluster_id=C3444 | |||
|description=CAGE_peak_5_at_PLEKHG3_5end | |||
|id=chr14:65170917..65170935,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.20e-15!18;CL:0000789!1.20e-15!18;CL:0002420!1.20e-15!18;CL:0002419!1.20e-15!18;CL:0000790!1.20e-15!18;CL:0000037!1.58e-15!172;CL:0000566!1.58e-15!172;CL:0002032!1.17e-14!165;CL:0000837!1.17e-14!165;CL:0000738!1.82e-14!140;CL:0000988!1.69e-13!182;CL:0000625!2.98e-11!11;CL:0000094!9.16e-11!8;CL:0000084!1.05e-09!25;CL:0000827!1.05e-09!25;CL:0000763!1.78e-09!112;CL:0000049!1.78e-09!112;CL:0002031!2.42e-09!124;CL:0002087!3.54e-09!119;CL:0000766!5.24e-09!76;CL:0000624!2.83e-07!6;CL:0000081!3.51e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000094;4.94e-26;8!CL:0000791;2.88e-25;18!CL:0000789;2.88e-25;18!CL:0002419;2.88e-25;18!CL:0000625;6.06e-23;11!CL:0000081;1.17e-18;11!CL:0000084;1.47e-17;25!CL:0000775;3.46e-14;3!CL:0000623;3.94e-14;3!CL:0000771;5.08e-10;2!CL:0002393;9.29e-07;6!CL:0002397;9.29e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.63e-26,8;CL:0000791,1.55e-25,18;CL:0000789,1.55e-25,18;CL:0002420,1.55e-25,18;CL:0002419,1.55e-25,18;CL:0000790,1.55e-25,18;CL:0000625,2.86e-23,11;CL:0000738,8.64e-19,136;CL:0000081,9.41e-19,11;CL:0000084,9.53e-18,25;CL:0000827,9.53e-18,25;CL:0000037,2.01e-16,168;CL:0000988,3.15e-15,177;CL:0002032,1.00e-14,161;CL:0000837,1.00e-14,161;CL:0000775,3.40e-14,3;CL:0000623,4.60e-14,3;CL:0000825,4.60e-14,3;CL:0000838,1.26e-12,52;CL:0000542,2.49e-12,53;CL:0000051,2.49e-12,53;CL:0000771,4.56e-10,2;CL:0002087,1.48e-09,115;CL:0002031,7.34e-09,120;CL:0000766,6.97e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000790;2.88e-25;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.20e-12!115;UBERON:0000178!4.06e-11!15;UBERON:0000179!4.06e-11!15;UBERON:0000463!4.06e-11!15;UBERON:0002390!2.33e-09!102;UBERON:0003061!2.33e-09!102;UBERON:0002193!6.45e-08!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.62e-26;15!UBERON:0000179;3.62e-26;15!UBERON:0000463;3.62e-26;15!UBERON:0002390;1.74e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.95e-26,15;UBERON:0000179,3.95e-26,15;UBERON:0000463,3.95e-26,15;UBERON:0002390,4.86e-08,98;UBERON:0003061,4.86e-08,98;UBERON:0002193,5.66e-07,108 | |||
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| ||
|short_description=p5@PLEKHG3 | |||
}} | }} |
Latest revision as of 01:57, 25 September 2015
Short description: | p5@PLEKHG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PLEKHG3_5end |
Coexpression cluster: | C3444_Neutrophils_CD8_Natural_Whole_CD4_Eosinophils_Peripheral |
Association with transcript: | -218bp_to_ENST00000247226_5end |
EntrezGene: | PLEKHG3 |
HGNC: | 20364 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 3.63e-26 | 8 |
mature alpha-beta T cell | 1.55e-25 | 18 |
alpha-beta T cell | 1.55e-25 | 18 |
immature T cell | 1.55e-25 | 18 |
mature T cell | 1.55e-25 | 18 |
immature alpha-beta T cell | 1.55e-25 | 18 |
CD8-positive, alpha-beta T cell | 2.86e-23 | 11 |
leukocyte | 8.64e-19 | 136 |
blood cell | 9.41e-19 | 11 |
T cell | 9.53e-18 | 25 |
pro-T cell | 9.53e-18 | 25 |
hematopoietic stem cell | 2.01e-16 | 168 |
hematopoietic cell | 3.15e-15 | 177 |
hematopoietic oligopotent progenitor cell | 1.00e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.00e-14 | 161 |
neutrophil | 3.40e-14 | 3 |
natural killer cell | 4.60e-14 | 3 |
pro-NK cell | 4.60e-14 | 3 |
lymphoid lineage restricted progenitor cell | 1.26e-12 | 52 |
lymphocyte | 2.49e-12 | 53 |
common lymphoid progenitor | 2.49e-12 | 53 |
eosinophil | 4.56e-10 | 2 |
nongranular leukocyte | 1.48e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 7.34e-09 | 120 |
myeloid leukocyte | 6.97e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
blood | 3.95e-26 | 15 |
haemolymphatic fluid | 3.95e-26 | 15 |
organism substance | 3.95e-26 | 15 |
hematopoietic system | 4.86e-08 | 98 |
blood island | 4.86e-08 | 98 |
hemolymphoid system | 5.66e-07 | 108 |