FFCP PHASE1:Hg19::chr2:74754698..74754716,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=550 | |EntrezGene=550 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=891 | |HGNC=891 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000462297_5end | |association_with_transcript=24bp_to_ENST00000462297_5end | ||
|cluster_id=chr2:74754698..74754716,- | |||
|description=CAGE_peak_9_at_AUP1_5end | |description=CAGE_peak_9_at_AUP1_5end | ||
|id=chr2:74754698..74754716,- | |id=chr2:74754698..74754716,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;8.74e-17;3!CL:0002188;8.38e-11;5!CL:0002231;3.92e-08;3!CL:1000746;7.72e-08;7!CL:1000612;7.72e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,3.12e-17,3;CL:0002188,1.21e-10,5;CL:0002231,1.97e-08,3;CL:1000746,9.99e-08,7;CL:1000612,9.99e-08,7 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.62e-12;2!UBERON:0005754;4.05e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.15e-08;3!UBERON:0004054;2.15e-08;3!UBERON:0000074;7.72e-08;7!UBERON:0001229;7.72e-08;7!UBERON:0000998;4.05e-07;1!UBERON:0006868;4.05e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000080,3.50e-15,9;UBERON:0002120,3.50e-15,9;UBERON:0004875,3.50e-15,9;UBERON:0005721,3.50e-15,9;UBERON:0005754,3.50e-15,9;UBERON:0007297,3.50e-15,9;UBERON:0004876,2.21e-12,11;UBERON:0003887,2.49e-11,12;UBERON:0005103,4.09e-11,8;UBERON:0000083,4.09e-11,8;UBERON:0009201,4.09e-11,8;UBERON:0006553,4.09e-11,8;UBERON:0003074,4.09e-11,8;UBERON:0003060,4.09e-11,8;UBERON:0000058,6.25e-10,19;UBERON:0002417,5.95e-09,60;UBERON:0000916,5.95e-09,60;UBERON:0003064,8.15e-09,28;UBERON:0005172,2.05e-08,54;UBERON:0005173,2.05e-08,54;UBERON:0006947,3.54e-08,3;UBERON:0004054,3.54e-08,3;UBERON:0010532,9.99e-08,7;UBERON:0000074,9.99e-08,7;UBERON:0001229,9.99e-08,7;UBERON:0001230,9.99e-08,7;UBERON:0003220,9.99e-08,7;UBERON:0005749,9.99e-08,7;UBERON:0004199,9.99e-08,7;UBERON:0004209,9.99e-08,7;UBERON:0004198,9.99e-08,7;UBERON:0000998,3.95e-07,1;UBERON:0006868,3.95e-07,1;UBERON:0005256,5.94e-07,122 | |||
|phase1_expression=0.908391896352783,0,1.12763523276777,0,0.446961094427288,0.872338524100369,0,0,0,0,2.09340350391728,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0.154816123316076,1.83884244895785,0.30120591877825,0,0,0,0,0.553995408531877,0,0.434021741431704,0.895661896959697,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0,0.411167888021826,0,0.28769239232215,0,0,0.344745680736619,0,0,0.752969358170419,0.272906150057846,0,1.22433556948361,0.641858054152187,1.27867425159808,0,0,0.426224750532694,0,0,0.622822248995575,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0.182664153764634,0,0,0,0,1.20118796110804,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0.506039384039006,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0.0945348171640679,0,0,0.196468613246569,0,0.370784442784429,0,0.348259474598534,0,0.238490624305342,0,0,0.198762407366705,0.860234595106124,0,0,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0,0.805658634218294,0,0.488124115096339,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0.633152558322899,0.397227542439656,0.860509862246441,0,0,0,0.49333509683432,0.311211035399766,0,0,0.151357427644931,0,0,0.312160076830321,0.570471821544449,0.896692083310806,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0.103325781175765,1.18800285728205,0.494533858557114,0,0,0,0.250237039743928,0,0,0.30648779579902,0.150238058906597,0,0,0.427114777637135,0.211931901159562,0,0,0,0.18611685633159,0.337552664482532,0.194874010322397,0,0.0920498986422993,0,0,0.10075209822764,0,0.773043412653187,0.545492241181669,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,1.40241773803446,0,0,1.26755034821831,0.982827216677626,0,0,0.122988438543114,0.171567810298526,0.658501712451753,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0,0,0.462985512576611,0,0,0,0,0.234004265139238,0.297262324577456,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0.264145302039678,0,0.576479813667846,0.75745460055828,0,1.90994212779139,1.17217447210047,1.71072446022705,0.719792448923265,0.901029173531752,0.571652865261156,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0.791951872933429,0,0,0.199945982364114,1.2162378064119,0.502257091432126,0,0,0,0,0.144781306667579,0.205476322550383,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0.167516265334349,0.637938751653163,0,2.99161459204025,0.414415513436035,0.12269149171914,0,0,0.415941723061614,0.356857977594324,0,0,0,0,2.0694614258501,0.664225598535437,0,0.260650843404249,0.195801157462741,0.343143423810856,0,0,0,3.63753085735511,0,0,0.992431231275107,0.153461973288062,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0.154209693802656,0.355123450626254,0.0821271560138091,0.519254429183621,0.232420756919918,1.69203229428271,1.40354529212299,0.552485933615378,0,0.182091168006717,0.262248829918848,0,0,0,0,0,1.13733384070897,0,0.431831832204279,3.08454505380579,0,0.501689773854853,0,0,0,0,0,0,0,0,0.824328093181778,0.366277859273374,0,0,0,0,1.25671933779759,0.154048617114644,0,0.137836572484531,0,0,0.255679882248303,0.267096106940212,0.495854746082934,0,0,0.2023155617111,0.464845549297286,0.94443704049192,0,0,0,0,0.55597265731176,0.143124886741991,0,0,0,0.255897791311334,0,0.636406495851874,0,0,0,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0.243713489631284,0,0.272999822815972,0.282810863907425,0,0,0.66343897524122,0.438450885253763,0,0,0.608731130888112,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0.379473173765715,0,0.192444225451024,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0.211673582723883,0.324621940274555,0,0,0,0,0,0.1605880751037,0,0,0.687010689511529,0,0,0.333698283423817,0,0,0,0,0,0,0.18714054040822,0.439524537815682,0,0.557216921387392,0.568272293612826,0.23874448473769,0.890894042497916,0,0,0.281338832821026,0,0.16480387422676,0,0,0.552567831062295,0.755798243562828,0.102268682502155,0,0.311039587661807,0,0,0,0.690503839458535,0,0,0,0.649376687132959,0,0.260427761085233,0,0.724999575434793,0.227586896570999,0,0,0.344743373241465,0.583209226766509,0.694499979733169,0,0.120596438625408,0,0.884634079449797,0,0,0.10893846351899,0.278847488557207,0.153900517007594,0,0.46112780877612,1.34636466614658,0.217294743844016,0.638002319463839,0.641183153813036,1.5991043280559,0,0,0.498635045700469,0,0,0,0,0.158936578980379,0.210998064528027,0.1632328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| ||
|short_description=p9@AUP1 | |short_description=p9@AUP1 | ||
}} | }} |
Latest revision as of 11:44, 18 September 2015
Short description: | p9@AUP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_AUP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000462297_5end |
EntrezGene: | AUP1 |
HGNC: | 891 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 3.12e-17 | 3 |
glomerular endothelial cell | 1.21e-10 | 5 |
epithelial cell of prostate | 1.97e-08 | 3 |
glomerular cell | 9.99e-08 | 7 |
kidney corpuscule cell | 9.99e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mesonephros | 3.50e-15 | 9 |
pronephros | 3.50e-15 | 9 |
nephrogenic cord | 3.50e-15 | 9 |
pronephric mesoderm | 3.50e-15 | 9 |
rostral part of nephrogenic cord | 3.50e-15 | 9 |
presumptive pronephric mesoderm | 3.50e-15 | 9 |
urogenital ridge | 2.21e-12 | 11 |
intraembryonic coelom | 2.49e-11 | 12 |
mesonephric epithelium | 4.09e-11 | 8 |
mesonephric tubule | 4.09e-11 | 8 |
nephric duct | 4.09e-11 | 8 |
renal duct | 4.09e-11 | 8 |
mesonephric duct | 4.09e-11 | 8 |
pronephric duct | 4.09e-11 | 8 |
duct | 6.25e-10 | 19 |
abdominal segment of trunk | 5.95e-09 | 60 |
abdomen | 5.95e-09 | 60 |
intermediate mesoderm | 8.15e-09 | 28 |
abdomen element | 2.05e-08 | 54 |
abdominal segment element | 2.05e-08 | 54 |
male genital duct | 3.54e-08 | 3 |
internal male genitalia | 3.54e-08 | 3 |
primitive nephron | 9.99e-08 | 7 |
renal glomerulus | 9.99e-08 | 7 |
renal corpuscle | 9.99e-08 | 7 |
glomerular capsule | 9.99e-08 | 7 |
metanephric mesenchyme | 9.99e-08 | 7 |
glomerular tuft | 9.99e-08 | 7 |
S-shaped body | 9.99e-08 | 7 |
renal vesicle | 9.99e-08 | 7 |
comma-shaped body | 9.99e-08 | 7 |
seminal vesicle | 3.95e-07 | 1 |
seminal fluid secreting gland | 3.95e-07 | 1 |
trunk mesenchyme | 5.94e-07 | 122 |