FFCP PHASE1:Hg19::chrX:82763328..82763340,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5456 | |EntrezGene=5456 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9217 | |HGNC=9217 | ||
|TSSclassifier=strong | |||
|UniProt=P49335,B2RC71 | |UniProt=P49335,B2RC71 | ||
|association_with_transcript=59bp_to_ENST00000373200,NM_000307,uc004eeg.2_5end | |association_with_transcript=59bp_to_ENST00000373200,NM_000307,uc004eeg.2_5end | ||
|cluster_id=chrX:82763328..82763340,+ | |||
|coexpression_cluster_id=C1309 | |||
|description=CAGE_peak_3_at_POU3F4_5end | |description=CAGE_peak_3_at_POU3F4_5end | ||
|id=chrX:82763328..82763340,+ | |id=chrX:82763328..82763340,+ | ||
|ontology_enrichment_celltype=CL:0000128!4.62e-15!7;CL:0000126!4.62e-15!7;CL:0000127!4.62e-15!7;CL:0002453!4.62e-15!7;CL:0002319!4.68e-14!25;CL:0000047!2.89e-10!8;CL:0002603!9.06e-10!3;CL:0002605!1.26e-09!3;CL:0000095!8.23e-07!17;CL:0000123!8.23e-07!17;CL:0000133!8.52e-07!59 | |ontology_enrichment_celltype=CL:0000128!4.62e-15!7;CL:0000126!4.62e-15!7;CL:0000127!4.62e-15!7;CL:0002453!4.62e-15!7;CL:0002319!4.68e-14!25;CL:0000047!2.89e-10!8;CL:0002603!9.06e-10!3;CL:0002605!1.26e-09!3;CL:0000095!8.23e-07!17;CL:0000123!8.23e-07!17;CL:0000133!8.52e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.17e-16;2!CL:0002319;3.62e-13;25!CL:0000540;3.27e-12;6!CL:0000404;3.27e-12;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.34e-24,8;CL:0002319,3.42e-13,25;CL:0000540,3.03e-12,6;CL:0000031,3.03e-12,6;CL:0000404,3.03e-12,6;CL:0000133,8.66e-09,59;CL:0000221,5.18e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0010122;9.25e-17;2!CL:0000031;3.27e-12;6!UBERON:0006222;4.19e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.05e-77!57;UBERON:0005068!2.05e-77!57;UBERON:0006241!2.05e-77!57;UBERON:0007135!2.05e-77!57;UBERON:0001017!9.48e-76!82;UBERON:0005743!9.53e-72!86;UBERON:0002616!1.10e-70!59;UBERON:0000955!1.19e-64!69;UBERON:0006238!1.19e-64!69;UBERON:0000073!5.99e-64!94;UBERON:0001016!5.99e-64!94;UBERON:0001893!5.81e-57!34;UBERON:0002020!1.01e-56!34;UBERON:0003528!1.01e-56!34;UBERON:0001869!2.04e-56!32;UBERON:0002791!2.79e-54!33;UBERON:0002780!5.64e-54!41;UBERON:0001890!5.64e-54!41;UBERON:0006240!5.64e-54!41;UBERON:0003080!1.57e-52!42;UBERON:0003075!1.01e-50!86;UBERON:0007284!1.01e-50!86;UBERON:0002346!5.20e-48!90;UBERON:0000956!1.32e-41!25;UBERON:0000203!1.32e-41!25;UBERON:0002619!4.71e-34!22;UBERON:0003056!5.91e-34!61;UBERON:0000033!6.74e-34!123;UBERON:0001950!1.67e-33!20;UBERON:0004121!2.57e-32!169;UBERON:0000153!7.73e-32!129;UBERON:0007811!7.73e-32!129;UBERON:0000924!2.66e-31!173;UBERON:0006601!2.66e-31!173;UBERON:0007023!1.23e-27!115;UBERON:0004733!5.07e-27!12;UBERON:0002028!5.07e-27!12;UBERON:0007277!5.07e-27!12;UBERON:0003076!3.36e-25!15;UBERON:0003057!3.36e-25!15;UBERON:0002680!5.22e-25!9;UBERON:0001895!5.22e-25!9;UBERON:0010092!5.22e-25!9;UBERON:0004732!9.30e-25!13;UBERON:0000025!9.12e-19!194;UBERON:0002037!9.45e-18!6;UBERON:0006215!9.45e-18!6;UBERON:0002308!3.04e-16!9;UBERON:0000125!3.04e-16!9;UBERON:0002021!1.19e-15!5;UBERON:0000369!5.96e-14!4;UBERON:0002435!5.96e-14!4;UBERON:0000204!5.96e-14!4;UBERON:0010082!5.96e-14!4;UBERON:0004111!4.89e-13!241;UBERON:0002420!2.33e-12!9;UBERON:0007245!2.33e-12!9;UBERON:0010009!2.33e-12!9;UBERON:0010011!2.33e-12!9;UBERON:0000454!2.33e-12!9;UBERON:0009663!1.44e-11!7;UBERON:0005383!6.41e-11!3;UBERON:0005382!6.41e-11!3;UBERON:0000064!6.45e-11!219;UBERON:0000477!7.84e-11!286;UBERON:0001872!4.82e-10!5;UBERON:0001871!2.82e-09!7;UBERON:0000483!3.07e-09!309;UBERON:0000119!4.75e-09!312;UBERON:0000988!5.62e-09!3;UBERON:0000475!1.45e-08!365;UBERON:0002298!1.90e-08!8;UBERON:0000200!3.17e-08!6;UBERON:0001873!8.96e-08!2;UBERON:0010122!8.96e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;5.82e-32;4!UBERON:0002435;5.82e-32;4!UBERON:0000204;5.82e-32;4!UBERON:0002791;2.69e-26;32!UBERON:0001869;2.37e-25;32!UBERON:0005383;1.85e-24;3!UBERON:0005382;1.85e-24;3!UBERON:0002021;2.58e-24;5!UBERON:0001893;1.89e-22;34!UBERON:0003528;4.24e-21;34!UBERON:0002020;4.24e-21;34!UBERON:0002780;2.18e-19;41!UBERON:0001890;2.18e-19;41!UBERON:0009663;2.20e-18;7!UBERON:0001873;9.25e-17;2!UBERON:0002420;2.41e-14;9!UBERON:0000125;2.41e-14;9!UBERON:0007245;2.41e-14;9!UBERON:0002308;2.41e-14;9!UBERON:0010009;2.41e-14;9!UBERON:0010011;2.41e-14;9!UBERON:0000454;2.41e-14;9!UBERON:0000073;8.49e-14;53!UBERON:0002616;8.49e-14;53!UBERON:0000956;1.13e-13;25!UBERON:0000203;1.13e-13;25!UBERON:0000955;1.23e-13;68!UBERON:0001950;9.56e-13;20!UBERON:0001017;1.07e-12;75!UBERON:0002619;1.35e-11;22!UBERON:0001874;1.81e-09;1!UBERON:0001016;2.66e-09;83!UBERON:0001882;2.82e-09;1!UBERON:0005403;2.82e-09;1!UBERON:0002902;8.16e-09;1!UBERON:0009899;8.16e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.60e-33,81;UBERON:0000369,5.61e-32,4;UBERON:0002435,5.61e-32,4;UBERON:0000204,5.61e-32,4;UBERON:0010082,5.61e-32,4;UBERON:0001016,6.69e-30,89;UBERON:0002791,2.17e-26,32;UBERON:0001869,2.17e-26,32;UBERON:0000073,2.70e-25,53;UBERON:0002616,2.70e-25,53;UBERON:0003528,8.88e-25,34;UBERON:0002020,8.88e-25,34;UBERON:0001893,8.88e-25,34;UBERON:0005383,1.65e-24,3;UBERON:0005382,1.65e-24,3;UBERON:0002780,2.65e-24,41;UBERON:0001890,2.65e-24,41;UBERON:0003080,2.65e-24,41;UBERON:0006240,2.65e-24,41;UBERON:0002021,4.34e-24,5;UBERON:0001049,7.86e-24,56;UBERON:0005068,7.86e-24,56;UBERON:0006241,7.86e-24,56;UBERON:0007135,7.86e-24,56;UBERON:0000955,6.85e-22,68;UBERON:0006238,6.85e-22,68;UBERON:0009663,2.16e-18,7;UBERON:0001873,8.55e-17,2;UBERON:0010122,8.55e-17,2;UBERON:0003056,8.65e-16,61;UBERON:0003075,1.43e-15,82;UBERON:0007284,1.43e-15,82;UBERON:0002346,9.71e-15,86;UBERON:0002420,2.37e-14,9;UBERON:0000125,2.37e-14,9;UBERON:0007245,2.37e-14,9;UBERON:0002308,2.37e-14,9;UBERON:0010009,2.37e-14,9;UBERON:0010011,2.37e-14,9;UBERON:0000454,2.37e-14,9;UBERON:0004121,3.97e-14,171;UBERON:0000924,3.97e-14,171;UBERON:0006601,3.97e-14,171;UBERON:0000956,1.39e-13,25;UBERON:0000203,1.39e-13,25;UBERON:0001950,1.16e-12,20;UBERON:0010371,8.93e-12,104;UBERON:0002619,1.60e-11,22;UBERON:0011216,2.80e-11,223;UBERON:0001874,1.74e-09,1;UBERON:0001882,3.05e-09,1;UBERON:0005403,3.05e-09,1;UBERON:0010314,9.22e-09,132;UBERON:0002902,1.07e-08,1;UBERON:0009899,1.07e-08,1 | |||
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|short_description=p3@POU3F4 | |short_description=p3@POU3F4 | ||
}} | }} |
Latest revision as of 13:10, 16 September 2015
Short description: | p3@POU3F4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_POU3F4_5end |
Coexpression cluster: | C1309_putamen_parietal_caudate_temporal_duodenum_Neurons_occipital |
Association with transcript: | 59bp_to_ENST00000373200, NM_000307, uc004eeg.2_5end |
EntrezGene: | POU3F4 |
HGNC: | 9217 |
UniProt: | P49335B2RC71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.34e-24 | 8 |
neural cell | 3.42e-13 | 25 |
neuron | 3.03e-12 | 6 |
neuroblast | 3.03e-12 | 6 |
electrically signaling cell | 3.03e-12 | 6 |
neurectodermal cell | 8.66e-09 | 59 |
ectodermal cell | 5.18e-07 | 72 |