FFCP PHASE1:Hg19::chr14:93388989..93389000,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:93388989..93389000,+
|short_description=p6@CHGA
|description=CAGE_peak_6_at_CHGA_5end
|association_with_transcript=-424bp_to_ENST00000216492_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1113 | |EntrezGene=1113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1929 | |HGNC=1929 | ||
|TSSclassifier=strong | |||
|UniProt=P10645 | |UniProt=P10645 | ||
|association_with_transcript=-424bp_to_ENST00000216492_5end | |||
|cluster_id=chr14:93388989..93389000,+ | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_6_at_CHGA_5end | |||
|id=chr14:93388989..93389000,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000319;1.71e-19;1!CL:0002535;1.43e-10;2!CL:0000159;1.97e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,2.25e-19,1;CL:0002535,1.43e-10,2;CL:0000159,2.27e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;1.71e-19;1!DOID:4556;2.25e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.25e-19,1;DOID:4556,2.19e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002619!2.53e-40!22;UBERON:0001950!2.98e-39!20;UBERON:0001049!3.36e-36!57;UBERON:0005068!3.36e-36!57;UBERON:0006241!3.36e-36!57;UBERON:0007135!3.36e-36!57;UBERON:0000956!3.25e-35!25;UBERON:0000203!3.25e-35!25;UBERON:0001869!2.19e-34!32;UBERON:0002780!6.59e-33!41;UBERON:0001890!6.59e-33!41;UBERON:0006240!6.59e-33!41;UBERON:0001893!3.66e-32!34;UBERON:0002020!4.03e-32!34;UBERON:0003528!4.03e-32!34;UBERON:0003080!5.04e-32!42;UBERON:0002616!6.68e-32!59;UBERON:0002791!2.08e-29!33;UBERON:0000955!2.11e-28!69;UBERON:0006238!2.11e-28!69;UBERON:0001017!2.56e-27!82;UBERON:0007023!4.09e-27!115;UBERON:0000073!1.22e-26!94;UBERON:0001016!1.22e-26!94;UBERON:0005743!9.01e-26!86;UBERON:0003075!4.58e-24!86;UBERON:0007284!4.58e-24!86;UBERON:0000200!9.27e-24!6;UBERON:0002346!1.01e-22!90;UBERON:0003056!1.13e-20!61;UBERON:0001871!1.23e-17!7;UBERON:0000033!7.11e-15!123;UBERON:0000153!6.58e-14!129;UBERON:0007811!6.58e-14!129;UBERON:0004121!4.24e-13!169;UBERON:0000924!1.21e-12!173;UBERON:0006601!1.21e-12!173;UBERON:0002771!2.55e-12!3;UBERON:0000007!1.74e-09!2;UBERON:0001870!2.95e-09!2;UBERON:0000025!4.27e-09!194;UBERON:0000064!4.13e-08!219;UBERON:0001872!7.97e-08!5;UBERON:0002298!8.08e-08!8;UBERON:0000349!1.78e-07!5;UBERON:0002021!2.04e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002581;3.91e-19;1!UBERON:0001950;6.25e-14;20!UBERON:0000200;7.33e-13;6!UBERON:0002619;9.43e-13;22!UBERON:0000956;2.54e-11;25!UBERON:0000203;2.54e-11;25!UBERON:0001871;3.66e-11;6!UBERON:0006955;1.43e-10;2!UBERON:0004801;1.43e-10;2!UBERON:0000007;1.97e-10;2!UBERON:0001876;2.99e-10;2!UBERON:0002702;2.99e-10;2!UBERON:0001869;1.82e-09;32!UBERON:0003528;1.10e-08;34!UBERON:0002791;1.10e-08;32!UBERON:0002020;1.10e-08;34!UBERON:0002780;1.47e-08;41!UBERON:0001890;1.47e-08;41!UBERON:0001893;1.25e-07;34!UBERON:0002114;1.93e-07;2!UBERON:0001870;2.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002581,4.69e-19,1;UBERON:0001950,6.25e-14,20;UBERON:0000200,7.33e-13,6;UBERON:0002619,9.43e-13,22;UBERON:0000956,2.54e-11,25;UBERON:0000203,2.54e-11,25;UBERON:0001871,3.66e-11,6;UBERON:0002780,9.29e-11,41;UBERON:0001890,9.29e-11,41;UBERON:0003080,9.29e-11,41;UBERON:0006240,9.29e-11,41;UBERON:0006955,1.43e-10,2;UBERON:0004801,1.43e-10,2;UBERON:0000007,1.72e-10,2;UBERON:0001876,2.49e-10,2;UBERON:0002702,2.72e-10,2;UBERON:0002791,5.47e-09,32;UBERON:0001869,5.47e-09,32;UBERON:0003528,1.72e-08,34;UBERON:0002020,1.72e-08,34;UBERON:0001893,1.72e-08,34;UBERON:0000073,2.23e-08,53;UBERON:0002616,2.23e-08,53;UBERON:0001049,6.13e-08,56;UBERON:0005068,6.13e-08,56;UBERON:0006241,6.13e-08,56;UBERON:0007135,6.13e-08,56;UBERON:0002114,1.93e-07,2;UBERON:0003056,2.67e-07,61;UBERON:0001870,2.79e-07,3 | |||
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| ||
|short_description=p6@CHGA | |||
}} | }} |
Latest revision as of 15:36, 16 September 2015
Short description: | p6@CHGA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CHGA_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | -424bp_to_ENST00000216492_5end |
EntrezGene: | CHGA |
HGNC: | 1929 |
UniProt: | P10645 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 2.25e-19 | 1 |
epithelial cell of cervix | 1.43e-10 | 2 |
seromucus secreting cell | 2.27e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
postcentral gyrus | 4.69e-19 | 1 |
neocortex | 6.25e-14 | 20 |
gyrus | 7.33e-13 | 6 |
regional part of cerebral cortex | 9.43e-13 | 22 |
cerebral cortex | 2.54e-11 | 25 |
pallium | 2.54e-11 | 25 |
temporal lobe | 3.66e-11 | 6 |
regional part of forebrain | 9.29e-11 | 41 |
forebrain | 9.29e-11 | 41 |
anterior neural tube | 9.29e-11 | 41 |
future forebrain | 9.29e-11 | 41 |
uterine epithelium | 1.43e-10 | 2 |
cervix epithelium | 1.43e-10 | 2 |
pituitary gland | 1.72e-10 | 2 |
amygdala | 2.49e-10 | 2 |
middle frontal gyrus | 2.72e-10 | 2 |
regional part of telencephalon | 5.47e-09 | 32 |
cerebral hemisphere | 5.47e-09 | 32 |
brain grey matter | 1.72e-08 | 34 |
gray matter | 1.72e-08 | 34 |
telencephalon | 1.72e-08 | 34 |
regional part of nervous system | 2.23e-08 | 53 |
regional part of brain | 2.23e-08 | 53 |
neural tube | 6.13e-08 | 56 |
neural rod | 6.13e-08 | 56 |
future spinal cord | 6.13e-08 | 56 |
neural keel | 6.13e-08 | 56 |
duodenum | 1.93e-07 | 2 |
pre-chordal neural plate | 2.67e-07 | 61 |
frontal cortex | 2.79e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.25e-19 | 1 |
lung large cell carcinoma | 2.19e-07 | 3 |