FFCP PHASE1:Hg19::chr3:42004071..42004088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:42004071..42004088,+ | |||
|coexpression_cluster_id=C4272 | |||
|description=CAGE_peak_at_chr3:42004071..42004088,+ | |description=CAGE_peak_at_chr3:42004071..42004088,+ | ||
|id=chr3:42004071..42004088,+ | |id=chr3:42004071..42004088,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.71e-31!42;CL:0000860!1.76e-29!45;CL:0000766!1.03e-28!76;CL:0000738!2.89e-28!140;CL:0000037!6.93e-26!172;CL:0000566!6.93e-26!172;CL:0002032!8.74e-26!165;CL:0000837!8.74e-26!165;CL:0000557!7.58e-25!71;CL:0002031!2.38e-24!124;CL:0000988!4.93e-23!182;CL:0000763!9.69e-23!112;CL:0000049!9.69e-23!112;CL:0002009!5.07e-22!65;CL:0002087!1.24e-21!119;CL:0000839!3.04e-21!70;CL:0002194!1.90e-20!63;CL:0000576!1.90e-20!63;CL:0000040!1.90e-20!63;CL:0000559!1.90e-20!63;CL:0002320!8.91e-14!365;CL:0000134!4.26e-13!358;CL:0000219!4.58e-11!390;CL:0002393!8.69e-10!9;CL:0002397!8.69e-10!9;CL:0000034!3.28e-09!444;CL:0000048!3.70e-09!430;CL:0000094!9.87e-09!8;CL:0000723!1.25e-08!436 | |ontology_enrichment_celltype=CL:0002057!6.71e-31!42;CL:0000860!1.76e-29!45;CL:0000766!1.03e-28!76;CL:0000738!2.89e-28!140;CL:0000037!6.93e-26!172;CL:0000566!6.93e-26!172;CL:0002032!8.74e-26!165;CL:0000837!8.74e-26!165;CL:0000557!7.58e-25!71;CL:0002031!2.38e-24!124;CL:0000988!4.93e-23!182;CL:0000763!9.69e-23!112;CL:0000049!9.69e-23!112;CL:0002009!5.07e-22!65;CL:0002087!1.24e-21!119;CL:0000839!3.04e-21!70;CL:0002194!1.90e-20!63;CL:0000576!1.90e-20!63;CL:0000040!1.90e-20!63;CL:0000559!1.90e-20!63;CL:0002320!8.91e-14!365;CL:0000134!4.26e-13!358;CL:0000219!4.58e-11!390;CL:0002393!8.69e-10!9;CL:0002397!8.69e-10!9;CL:0000034!3.28e-09!444;CL:0000048!3.70e-09!430;CL:0000094!9.87e-09!8;CL:0000723!1.25e-08!436 | ||
|ontology_enrichment_celltype_v019=CL:0000094;7.28e-21;8!CL:0000767;8.74e-21;3!CL:0000623;9.98e-21;3!CL:0000081;3.97e-15;11!CL:0000771;1.82e-14;2!CL:0000097;2.50e-12;5!CL:0000037;3.55e-08;1!CL:0001024;3.55e-08;1!CL:0002032;1.26e-07;1!CL:0000557;1.26e-07;1!CL:0000163;4.69e-07;9!CL:0000766;6.83e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.36e-27,168;CL:0000738,3.15e-27,136;CL:0000988,1.03e-25,177;CL:0002032,2.59e-24,161;CL:0000837,2.59e-24,161;CL:0000623,6.94e-21,3;CL:0000825,6.94e-21,3;CL:0000094,7.61e-21,8;CL:0000767,9.68e-21,3;CL:0002031,2.87e-17,120;CL:0000766,4.83e-17,72;CL:0000763,1.26e-15,108;CL:0000049,1.26e-15,108;CL:0000081,4.10e-15,11;CL:0000771,1.77e-14,2;CL:0002087,1.41e-12,115;CL:0000097,1.91e-12,5;CL:0002028,1.91e-12,5;CL:0000557,2.80e-11,67;CL:0000134,2.65e-10,354;CL:0002320,5.31e-10,361;CL:0000219,6.19e-09,386;CL:0000838,1.12e-08,52;CL:0000542,1.74e-08,53;CL:0000051,1.74e-08,53;CL:0001024,3.55e-08,1;CL:0000034,4.61e-08,441;CL:0000839,6.88e-08,66;CL:0000048,1.26e-07,427;CL:0000723,1.91e-07,433;CL:0000163,4.06e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.06e-23!80;UBERON:0001474!3.20e-21!86;UBERON:0004765!1.94e-17!101;UBERON:0001434!1.94e-17!101;UBERON:0002390!2.19e-17!102;UBERON:0003061!2.19e-17!102;UBERON:0002405!6.49e-15!115;UBERON:0002193!2.03e-14!112;UBERON:0002384!1.40e-13!375;UBERON:0002204!4.54e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.42e-11,76;UBERON:0001474,1.47e-10,82;UBERON:0002390,5.86e-10,98;UBERON:0003061,5.86e-10,98;UBERON:0002384,1.37e-09,371;UBERON:0004765,2.04e-09,90;UBERON:0002405,4.88e-09,93;UBERON:0002193,8.45e-09,108;UBERON:0001434,3.04e-08,100 | |||
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| ||
|short_description=p@chr3:42004071..42004088,+ | |short_description=p@chr3:42004071..42004088,+ | ||
}} | }} |
Latest revision as of 20:58, 29 July 2015
Short description: | p@chr3:42004071..42004088, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:42004071..42004088, + |
Coexpression cluster: | C4272_Basophils_Mast_Natural_CD133_CD8_CD19_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.42e-11 | 76 |
bone element | 1.47e-10 | 82 |
hematopoietic system | 5.86e-10 | 98 |
blood island | 5.86e-10 | 98 |
connective tissue | 1.37e-09 | 371 |
skeletal element | 2.04e-09 | 90 |
immune system | 4.88e-09 | 93 |
hemolymphoid system | 8.45e-09 | 108 |
skeletal system | 3.04e-08 | 100 |