FFCP PHASE1:Hg19::chr15:51973708..51973725,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:51973708..51973725,+
|short_description=p3@SCG3
|description=CAGE_peak_3_at_SCG3_5end
|association_with_transcript=-3bp_to_ENST00000558709_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29106 | |EntrezGene=29106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13707 | |HGNC=13707 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000558709_5end | |||
|cluster_id=chr15:51973708..51973725,+ | |||
|coexpression_cluster_id=C1405 | |||
|description=CAGE_peak_3_at_SCG3_5end | |||
|id=chr15:51973708..51973725,+ | |||
|ontology_enrichment_celltype=CL:0000047!9.13e-12!8;CL:0000540!4.79e-09!6;CL:0000031!4.79e-09!6;CL:0000404!4.79e-09!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.71e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.63e-23;82!UBERON:0006215;2.42e-07;3!UBERON:0006241;3.04e-07;3!UBERON:0003057;3.04e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;4.85e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.78e-07,6 | |||
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| ||
|short_description=p3@SCG3 | |||
}} | }} |
Latest revision as of 01:09, 18 September 2015
Short description: | p3@SCG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCG3_5end |
Coexpression cluster: | C1405_smallcell_pineal_small_occipital_somatostatinoma_medial_amygdala |
Association with transcript: | -3bp_to_ENST00000558709_5end |
EntrezGene: | SCG3 |
HGNC: | 13707 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.71e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.78e-07 | 6 |