FFCP PHASE1:Hg19::chr6:152957988..152958037,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23345 | |EntrezGene=23345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |HGNC=17089 | ||
|TSSclassifier=strong | |||
|UniProt=F5GXQ8 | |UniProt=F5GXQ8 | ||
|association_with_transcript=0bp_to_ENST00000367248_5end | |association_with_transcript=0bp_to_ENST00000367248_5end | ||
|cluster_id=chr6:152957988..152958037,- | |||
|coexpression_cluster_id=C4575 | |||
|description=CAGE_peak_3_at_SYNE1_5end | |description=CAGE_peak_3_at_SYNE1_5end | ||
|id=chr6:152957988..152958037,- | |id=chr6:152957988..152958037,- | ||
|ontology_enrichment_celltype=CL:0000625!3.03e-09!11;CL:0000791!4.34e-08!18;CL:0000789!4.34e-08!18;CL:0002420!4.34e-08!18;CL:0002419!4.34e-08!18;CL:0000790!4.34e-08!18;CL:0000094!8.27e-07!8 | |ontology_enrichment_celltype=CL:0000625!3.03e-09!11;CL:0000791!4.34e-08!18;CL:0000789!4.34e-08!18;CL:0002420!4.34e-08!18;CL:0002419!4.34e-08!18;CL:0000790!4.34e-08!18;CL:0000094!8.27e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000625;4.19e-12;11!CL:0000791;3.09e-09;18!CL:0000789;3.09e-09;18!CL:0002419;3.09e-09;18!CL:0000094;8.91e-09;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.30e-12,11;CL:0000791,3.28e-09,18;CL:0000789,3.28e-09,18;CL:0002420,3.28e-09,18;CL:0002419,3.28e-09,18;CL:0000790,3.28e-09,18;CL:0000094,9.19e-09,8 | |||
|ontology_enrichment_development_v019=CL:0000790;3.09e-09;18!UBERON:0006601;2.95e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.07e-51!115;UBERON:0001049!2.13e-24!57;UBERON:0005068!2.13e-24!57;UBERON:0006241!2.13e-24!57;UBERON:0007135!2.13e-24!57;UBERON:0002616!1.36e-20!59;UBERON:0003080!5.98e-20!42;UBERON:0002780!1.81e-19!41;UBERON:0001890!1.81e-19!41;UBERON:0006240!1.81e-19!41;UBERON:0000955!2.36e-19!69;UBERON:0006238!2.36e-19!69;UBERON:0001017!1.71e-18!82;UBERON:0005743!3.35e-17!86;UBERON:0003075!1.21e-16!86;UBERON:0007284!1.21e-16!86;UBERON:0001893!2.08e-16!34;UBERON:0002020!2.54e-16!34;UBERON:0003528!2.54e-16!34;UBERON:0000073!7.69e-16!94;UBERON:0001016!7.69e-16!94;UBERON:0001869!7.80e-16!32;UBERON:0002791!9.94e-16!33;UBERON:0002346!2.47e-15!90;UBERON:0002619!1.51e-13!22;UBERON:0001950!2.07e-12!20;UBERON:0000153!1.01e-11!129;UBERON:0007811!1.01e-11!129;UBERON:0000956!2.07e-11!25;UBERON:0000203!2.07e-11!25;UBERON:0003056!3.48e-11!61;UBERON:0000033!4.33e-10!123;UBERON:0004121!5.26e-08!169;UBERON:0000924!1.59e-07!173;UBERON:0006601!1.59e-07!173;UBERON:0000479!1.91e-07!787 | |ontology_enrichment_uberon=UBERON:0007023!3.07e-51!115;UBERON:0001049!2.13e-24!57;UBERON:0005068!2.13e-24!57;UBERON:0006241!2.13e-24!57;UBERON:0007135!2.13e-24!57;UBERON:0002616!1.36e-20!59;UBERON:0003080!5.98e-20!42;UBERON:0002780!1.81e-19!41;UBERON:0001890!1.81e-19!41;UBERON:0006240!1.81e-19!41;UBERON:0000955!2.36e-19!69;UBERON:0006238!2.36e-19!69;UBERON:0001017!1.71e-18!82;UBERON:0005743!3.35e-17!86;UBERON:0003075!1.21e-16!86;UBERON:0007284!1.21e-16!86;UBERON:0001893!2.08e-16!34;UBERON:0002020!2.54e-16!34;UBERON:0003528!2.54e-16!34;UBERON:0000073!7.69e-16!94;UBERON:0001016!7.69e-16!94;UBERON:0001869!7.80e-16!32;UBERON:0002791!9.94e-16!33;UBERON:0002346!2.47e-15!90;UBERON:0002619!1.51e-13!22;UBERON:0001950!2.07e-12!20;UBERON:0000153!1.01e-11!129;UBERON:0007811!1.01e-11!129;UBERON:0000956!2.07e-11!25;UBERON:0000203!2.07e-11!25;UBERON:0003056!3.48e-11!61;UBERON:0000033!4.33e-10!123;UBERON:0004121!5.26e-08!169;UBERON:0000924!1.59e-07!173;UBERON:0006601!1.59e-07!173;UBERON:0000479!1.91e-07!787 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.08e-19;34!UBERON:0001869;6.83e-19;32!UBERON:0003528;1.17e-18;34!UBERON:0002020;1.17e-18;34!UBERON:0002780;1.87e-18;41!UBERON:0001890;1.87e-18;41!UBERON:0002791;2.21e-18;32!UBERON:0002619;2.81e-18;22!UBERON:0000073;8.73e-18;53!UBERON:0002616;8.73e-18;53!UBERON:0001950;1.02e-16;20!UBERON:0007023;3.93e-15;114!UBERON:0000956;3.96e-15;25!UBERON:0000203;3.96e-15;25!UBERON:0000955;9.54e-12;68!UBERON:0001017;4.39e-11;75!UBERON:0001016;2.00e-09;83!UBERON:0002420;1.83e-08;9!UBERON:0007245;1.83e-08;9!UBERON:0010009;1.83e-08;9!UBERON:0010011;1.83e-08;9!UBERON:0000454;1.83e-08;9!UBERON:0000125;2.03e-08;9!UBERON:0002308;2.03e-08;9!UBERON:0000178;2.46e-08;15!UBERON:0000179;2.46e-08;15!UBERON:0000463;2.46e-08;15!UBERON:0009663;4.81e-07;7!UBERON:0000200;5.64e-07;6 | |||
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| ||
|short_description=p3@SYNE1 | |short_description=p3@SYNE1 | ||
}} | }} |
Latest revision as of 07:08, 16 September 2015
Short description: | p3@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SYNE1_5end |
Coexpression cluster: | C4575_Neutrophils_cerebellum_Natural_CD8_Basophils_pituitary_Eosinophils |
Association with transcript: | 0bp_to_ENST00000367248_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | F5GXQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.30e-12 | 11 |
mature alpha-beta T cell | 3.28e-09 | 18 |
alpha-beta T cell | 3.28e-09 | 18 |
immature T cell | 3.28e-09 | 18 |
mature T cell | 3.28e-09 | 18 |
immature alpha-beta T cell | 3.28e-09 | 18 |
granulocyte | 9.19e-09 | 8 |