FFCP PHASE1:Hg19::chr6:64237801..64237820,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:64237801..64237820,+ | |||
|coexpression_cluster_id=C1088 | |||
|description=CAGE_peak_at_chr6:64237801..64237820,+ | |description=CAGE_peak_at_chr6:64237801..64237820,+ | ||
|id=chr6:64237801..64237820,+ | |id=chr6:64237801..64237820,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.38e-18!254;CL:0000223!1.71e-13!59;CL:0002076!1.29e-10!43;CL:0002541!6.18e-08!3;CL:0002368!6.95e-08!13;CL:0002159!1.05e-07!13;CL:0002166!1.16e-07!3;CL:0002621!2.44e-07!3 | |ontology_enrichment_celltype=CL:0000066!1.38e-18!254;CL:0000223!1.71e-13!59;CL:0002076!1.29e-10!43;CL:0002541!6.18e-08!3;CL:0002368!6.95e-08!13;CL:0002159!1.05e-07!13;CL:0002166!1.16e-07!3;CL:0002621!2.44e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000317;1.07e-12;2!CL:1000448;1.07e-12;2!CL:0002308;1.07e-12;2!CL:0002140;1.07e-12;2!CL:0002368;5.50e-11;13!CL:0002541;4.32e-09;3!CL:0002231;1.00e-08;3!CL:0002166;1.88e-08;3!CL:0002076;4.69e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.14e-12,2;CL:1000448,1.14e-12,2;CL:0002308,1.14e-12,2;CL:0002140,1.14e-12,2;CL:0000066,4.06e-12,253;CL:0002368,5.93e-11,13;CL:0002541,4.15e-09,3;CL:0002231,1.06e-08,3;CL:0002166,1.96e-08,3;CL:0000223,3.88e-08,58;CL:0002076,1.45e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.77e-12!106;DOID:0050687!1.18e-10!143 | |ontology_enrichment_disease=DOID:305!1.77e-12!106;DOID:0050687!1.18e-10!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.60e-17!9;UBERON:0004119!1.38e-13!169;UBERON:0000925!1.38e-13!169;UBERON:0006595!1.38e-13!169;UBERON:0001004!4.34e-13!72;UBERON:0000065!4.06e-11!53;UBERON:0001007!1.80e-09!155;UBERON:0001555!1.80e-09!155;UBERON:0007026!1.80e-09!155;UBERON:0001557!4.78e-09!19;UBERON:0000077!5.44e-09!130;UBERON:0008947!6.33e-09!38;UBERON:0003258!6.33e-09!38;UBERON:0001041!1.24e-08!98;UBERON:0000476!6.18e-08!3;UBERON:0000920!6.18e-08!3;UBERON:0000072!8.22e-08!46;UBERON:0002365!9.64e-08!31;UBERON:0002330!9.64e-08!31;UBERON:0003929!1.34e-07!54;UBERON:0004921!1.36e-07!129;UBERON:0004185!1.36e-07!129;UBERON:0005911!2.25e-07!82;UBERON:0001949!2.44e-07!3;UBERON:0009497!7.57e-07!25;UBERON:0000015!7.57e-07!25;UBERON:0002423!7.57e-07!25;UBERON:0006235!7.57e-07!25;UBERON:0004161!7.57e-07!25;UBERON:0002530!8.12e-07!59 | |ontology_enrichment_uberon=UBERON:0001737!1.60e-17!9;UBERON:0004119!1.38e-13!169;UBERON:0000925!1.38e-13!169;UBERON:0006595!1.38e-13!169;UBERON:0001004!4.34e-13!72;UBERON:0000065!4.06e-11!53;UBERON:0001007!1.80e-09!155;UBERON:0001555!1.80e-09!155;UBERON:0007026!1.80e-09!155;UBERON:0001557!4.78e-09!19;UBERON:0000077!5.44e-09!130;UBERON:0008947!6.33e-09!38;UBERON:0003258!6.33e-09!38;UBERON:0001041!1.24e-08!98;UBERON:0000476!6.18e-08!3;UBERON:0000920!6.18e-08!3;UBERON:0000072!8.22e-08!46;UBERON:0002365!9.64e-08!31;UBERON:0002330!9.64e-08!31;UBERON:0003929!1.34e-07!54;UBERON:0004921!1.36e-07!129;UBERON:0004185!1.36e-07!129;UBERON:0005911!2.25e-07!82;UBERON:0001949!2.44e-07!3;UBERON:0009497!7.57e-07!25;UBERON:0000015!7.57e-07!25;UBERON:0002423!7.57e-07!25;UBERON:0006235!7.57e-07!25;UBERON:0004161!7.57e-07!25;UBERON:0002530!8.12e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.07e-12;2!UBERON:0007771;1.07e-12;2!UBERON:0003297;1.07e-12;2!UBERON:0001821;1.07e-12;2!UBERON:0003487;1.07e-12;2!UBERON:0001820;1.07e-12;2!UBERON:0003124;4.32e-09;3!UBERON:0000920;4.32e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.14e-12,2;UBERON:0007771,1.14e-12,2;UBERON:0003297,1.14e-12,2;UBERON:0001821,1.14e-12,2;UBERON:0003487,1.14e-12,2;UBERON:0001820,1.14e-12,2;UBERON:0005089,1.14e-12,2;UBERON:0005088,1.14e-12,2;UBERON:0004119,5.39e-10,160;UBERON:0000925,5.39e-10,160;UBERON:0006595,5.39e-10,160;UBERON:0005911,2.76e-09,82;UBERON:0000920,4.15e-09,3;UBERON:0002530,3.58e-08,59;UBERON:0003929,2.79e-07,54;UBERON:0000065,4.45e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.818238361772504,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,1.20505514941741,0.882351781859152,0.217879444092406,1.18635309555548,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0,0,2.53510069643662,4.91413608338813,0,0,0,0,0.878002283269004,0,0.201057944823262,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,1.17587489739202,0.992425680696705,0.358234090811393,0.581267877027924,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,1.20303882181971,9.02393691571784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,4.59412430396938,2.60024098414608,0,0,0,0,0,0,0,0.0852266274161009,0,4.79326254546837,4.03599141466723,2.80747967488085,3.33820676823315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,1.08890984861323,0.0941438007767792,0,1.68471475667626,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,7.25137046597742,0,0,0,0,0.102268682502155,0,0,0,3.22238114416096,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,5.42301971544263,0.549585560411174,9.59462596833542,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.438535902517113,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0.576361668616424,0,0,13.8292606068624,0,8.48498524620464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.247247575143499,0.404421263125109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15144807199414,0,0,0,0,0,0,0,0,0,0,0.113312091520126,10.4052085911439,5.30027555648885,0,0,3.07956308191793,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0.856396000634902,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21421101526972,0,0.606965604236632,0,0.532214220975833,0,0,0,0,4.60955979447476,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,1.07132363163395,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.818238361772504,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,1.20505514941741,0.882351781859152,0.217879444092406,1.18635309555548,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0,0,2.53510069643662,4.91413608338813,0,0,0,0,0.878002283269004,0,0.201057944823262,0.833296006426766,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,1.17587489739202,0.992425680696705,0.358234090811393,0.581267877027924,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,1.20303882181971,9.02393691571784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,4.59412430396938,2.60024098414608,0,0,0,0,0,0,0,0.0852266274161009,0,4.79326254546837,4.03599141466723,2.80747967488085,3.33820676823315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,1.08890984861323,0.0941438007767792,0,1.68471475667626,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,7.25137046597742,0,0,0,0,0.102268682502155,0,0,0,3.22238114416096,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,5.42301971544263,0.549585560411174,9.59462596833542,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0.216388639742091,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.438535902517113,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0.576361668616424,0,0,13.8292606068624,0,8.48498524620464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.247247575143499,0.404421263125109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15144807199414,0,0,0,0,0,0,0,0,0,0,0.113312091520126,10.4052085911439,5.30027555648885,0,0,3.07956308191793,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0,0,0.856396000634902,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21421101526972,0,0.606965604236632,0,0.532214220975833,0,0,0,0,4.60955979447476,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,1.07132363163395,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr6:64237801..64237820,+ | |short_description=p@chr6:64237801..64237820,+ | ||
}} | }} |
Latest revision as of 02:41, 31 July 2015
Short description: | p@chr6:64237801..64237820, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:64237801..64237820, + |
Coexpression cluster: | C1088_liver_giant_anaplastic_glassy_bile_Hepatocyte_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.14e-12 | 2 |
epithelial cell of sweat gland | 1.14e-12 | 2 |
epithelial cell of skin gland | 1.14e-12 | 2 |
acinar cell of sebaceous gland | 1.14e-12 | 2 |
epithelial cell | 4.06e-12 | 253 |
respiratory epithelial cell | 5.93e-11 | 13 |
chorionic membrane mesenchymal stem cell | 4.15e-09 | 3 |
epithelial cell of prostate | 1.06e-08 | 3 |
epithelial cell of Malassez | 1.96e-08 | 3 |
endodermal cell | 3.88e-08 | 58 |
endo-epithelial cell | 1.45e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.14e-12 | 2 |
epidermis gland | 1.14e-12 | 2 |
gland of integumental system | 1.14e-12 | 2 |
sebaceous gland | 1.14e-12 | 2 |
skin sebaceous gland | 1.14e-12 | 2 |
sweat gland | 1.14e-12 | 2 |
sweat gland placode | 1.14e-12 | 2 |
sebaceous gland placode | 1.14e-12 | 2 |
endoderm-derived structure | 5.39e-10 | 160 |
endoderm | 5.39e-10 | 160 |
presumptive endoderm | 5.39e-10 | 160 |
endo-epithelium | 2.76e-09 | 82 |
egg chorion | 4.15e-09 | 3 |
gland | 3.58e-08 | 59 |
gut epithelium | 2.79e-07 | 54 |
respiratory tract | 4.45e-07 | 54 |