FFCP PHASE1:Hg19::chr8:117658838..117658848,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:117658838..117658848,- | |||
|coexpression_cluster_id=C472 | |||
|description=CAGE_peak_at_chr8:117658838..117658848,- | |description=CAGE_peak_at_chr8:117658838..117658848,- | ||
|id=chr8:117658838..117658848,- | |id=chr8:117658838..117658848,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000228;7.62e-26;1!CL:0002372;7.62e-26;1!CL:0000056;1.80e-07;4!CL:0000737;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,4.61e-26,1;CL:0002372,4.61e-26,1;CL:0000737,1.59e-07,4;CL:0000515,1.59e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.80e-07;4 | |||
|ontology_enrichment_disease=DOID:162!1.92e-09!235;DOID:0050687!2.18e-09!143;DOID:14566!6.96e-09!239;DOID:1749!1.84e-07!14;DOID:1324!6.04e-07!15 | |ontology_enrichment_disease=DOID:162!1.92e-09!235;DOID:0050687!2.18e-09!143;DOID:14566!6.96e-09!239;DOID:1749!1.84e-07!14;DOID:1324!6.04e-07!15 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001876;8.82e-51;2!UBERON:0000349;1.89e-45;5!UBERON:0001871;2.47e-15;6!UBERON:0001954;8.28e-14;2!UBERON:0003022;8.28e-14;2!UBERON:0002421;8.28e-14;2!UBERON:0002600;8.28e-14;2!UBERON:0002420;3.74e-12;9!UBERON:0007245;3.74e-12;9!UBERON:0010009;3.74e-12;9!UBERON:0010011;3.74e-12;9!UBERON:0000454;3.74e-12;9!UBERON:0002619;1.69e-10;22!UBERON:0000956;2.31e-09;25!UBERON:0000203;2.31e-09;25!UBERON:0002791;2.10e-07;32!UBERON:0001869;2.10e-07;32!UBERON:0001134;4.02e-07;16!UBERON:0002036;4.02e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001876,8.82e-51,2;UBERON:0000349,1.89e-45,5;UBERON:0001871,2.47e-15,6;UBERON:0001954,8.28e-14,2;UBERON:0003022,8.28e-14,2;UBERON:0002421,8.28e-14,2;UBERON:0002600,8.28e-14,2;UBERON:0002420,3.74e-12,9;UBERON:0007245,3.74e-12,9;UBERON:0010009,3.74e-12,9;UBERON:0010011,3.74e-12,9;UBERON:0000454,3.74e-12,9;UBERON:0002619,1.69e-10,22;UBERON:0000956,2.31e-09,25;UBERON:0000203,2.31e-09,25;UBERON:0002791,1.66e-07,32;UBERON:0001869,1.66e-07,32;UBERON:0003528,4.12e-07,34;UBERON:0002020,4.12e-07,34;UBERON:0001893,4.12e-07,34 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0.344745680736619,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0.795285947051099,0,0,0.221729397462564,0,0,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0.112085143993527,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0.735120647943095,0,0,0,0,0.399158742865633,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.242721043499027,0,0,0.23874448473769,0,0,14.9122147164945,4.50142132513641,0,0,0.422250816255987,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.455173793141999,0.508507300585533,0.472775363535873,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0.0769502585037971,0,0,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0,0.17472666824203,0.171986032471617,0.0967563312890851,0,0.164230914106418,0.0969890164884194,0.0882561266915003,0,0,0.19871461170299,0,0,0,0,0,0.288180834308212,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,3.54128855890097,0,0,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0.13223260174269,0,0.704815022316672,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0.617602894321944,0,0.176689145945881,0,0,0.256241518587947,0,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0,0.211312123358627,0,0.320075189082423,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0,0,0,0.247871528518004,0.558644917973244,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0.115525666150338,0.381382095467167,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0.351742488719241,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0.333694205676207,0,0.157115589916002,0,0,0,0,0,0,0,0,0.801711364730253,0,0.17071847709395,0,0,0,0,0.423387050190929,0.4582137370881,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,0.397901550322736,0.118920090777569,0,0.439762066981716,0.150962843566674,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0.157771562193185,0.135982980381829,0.436350690340377,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0.344745680736619,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0.211255286311942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0.795285947051099,0,0,0.221729397462564,0,0,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0.760272105718513,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0.112085143993527,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0.735120647943095,0,0,0,0,0.399158742865633,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.242721043499027,0,0,0.23874448473769,0,0,14.9122147164945,4.50142132513641,0,0,0.422250816255987,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0.455173793141999,0.508507300585533,0.472775363535873,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0.0769502585037971,0,0,0.0897576444097721,0,0.31900115973192,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0,0.17472666824203,0.171986032471617,0.0967563312890851,0,0.164230914106418,0.0969890164884194,0.0882561266915003,0,0,0.19871461170299,0,0,0,0,0,0.288180834308212,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0,0,3.54128855890097,0,0,0,0,0,0.0607495566580247,0,0,0,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0.13223260174269,0,0.704815022316672,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0.617602894321944,0,0.176689145945881,0,0,0.256241518587947,0,0.303859956177382,0.138258436151731,0,0,0,0.327609848846413,0,0.211312123358627,0,0.320075189082423,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0,0,0,0.247871528518004,0.558644917973244,0.318004350653419,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0.115525666150338,0.381382095467167,0,0.198916222116275,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0.351742488719241,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0.333694205676207,0,0.157115589916002,0,0,0,0,0,0,0,0,0.801711364730253,0,0.17071847709395,0,0,0,0,0.423387050190929,0.4582137370881,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,0.397901550322736,0.118920090777569,0,0.439762066981716,0.150962843566674,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0.157771562193185,0.135982980381829,0.436350690340377,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr8:117658838..117658848,- | |short_description=p@chr8:117658838..117658848,- | ||
}} | }} |
Latest revision as of 14:17, 31 July 2015
Short description: | p@chr8:117658838..117658848, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:117658838..117658848, - |
Coexpression cluster: | C472_amygdala_medial_hippocampus_insula_frontal_temporal_paracentral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 4.61e-26 | 1 |
myotube | 4.61e-26 | 1 |
striated muscle cell | 1.59e-07 | 4 |
skeletal muscle myoblast | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
amygdala | 8.82e-51 | 2 |
limbic system | 1.89e-45 | 5 |
temporal lobe | 2.47e-15 | 6 |
Ammon's horn | 8.28e-14 | 2 |
lobe parts of cerebral cortex | 8.28e-14 | 2 |
hippocampal formation | 8.28e-14 | 2 |
limbic lobe | 8.28e-14 | 2 |
basal ganglion | 3.74e-12 | 9 |
nuclear complex of neuraxis | 3.74e-12 | 9 |
aggregate regional part of brain | 3.74e-12 | 9 |
collection of basal ganglia | 3.74e-12 | 9 |
cerebral subcortex | 3.74e-12 | 9 |
regional part of cerebral cortex | 1.69e-10 | 22 |
cerebral cortex | 2.31e-09 | 25 |
pallium | 2.31e-09 | 25 |
regional part of telencephalon | 1.66e-07 | 32 |
cerebral hemisphere | 1.66e-07 | 32 |
brain grey matter | 4.12e-07 | 34 |
gray matter | 4.12e-07 | 34 |
telencephalon | 4.12e-07 | 34 |