FFCP PHASE1:Hg19::chr13:28552898..28552907,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:28552898..28552907,- | |||
|coexpression_cluster_id=C1705 | |||
|description=CAGE_peak_at_chr13:28552898..28552907,- | |description=CAGE_peak_at_chr13:28552898..28552907,- | ||
|id=chr13:28552898..28552907,- | |id=chr13:28552898..28552907,- | ||
|ontology_enrichment_celltype=CL:0002253!3.27e-10!2;CL:0002231!3.35e-07!3 | |ontology_enrichment_celltype=CL:0002253!3.27e-10!2;CL:0002231!3.35e-07!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!5.89e-41!11;UBERON:0000160!1.03e-40!27;UBERON:0001155!3.08e-32!9;UBERON:0005409!1.29e-31!35;UBERON:0001052!5.15e-19!4;UBERON:0004907!2.02e-15!5;UBERON:0004921!2.88e-13!129;UBERON:0004185!2.88e-13!129;UBERON:0002108!1.52e-11!14;UBERON:0001007!6.08e-11!155;UBERON:0001555!6.08e-11!155;UBERON:0007026!6.08e-11!155;UBERON:0004119!5.55e-10!169;UBERON:0000925!5.55e-10!169;UBERON:0006595!5.55e-10!169;UBERON:0001046!3.94e-09!19 | |ontology_enrichment_uberon=UBERON:0000059!5.89e-41!11;UBERON:0000160!1.03e-40!27;UBERON:0001155!3.08e-32!9;UBERON:0005409!1.29e-31!35;UBERON:0001052!5.15e-19!4;UBERON:0004907!2.02e-15!5;UBERON:0004921!2.88e-13!129;UBERON:0004185!2.88e-13!129;UBERON:0002108!1.52e-11!14;UBERON:0001007!6.08e-11!155;UBERON:0001555!6.08e-11!155;UBERON:0007026!6.08e-11!155;UBERON:0004119!5.55e-10!169;UBERON:0000925!5.55e-10!169;UBERON:0006595!5.55e-10!169;UBERON:0001046!3.94e-09!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.19e-35;17!UBERON:0002108;1.70e-32;4!UBERON:0005409;4.22e-28;22!UBERON:0004921;1.75e-17;33!UBERON:0000059;1.95e-15;11!UBERON:0001052;2.80e-11;4!UBERON:0004907;2.74e-09;5!UBERON:0001555;3.67e-07;54!UBERON:0001007;7.03e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.14e-35,17;UBERON:0002108,1.70e-32,4;UBERON:0005409,5.65e-25,25;UBERON:0000059,1.88e-15,11;UBERON:0001052,2.80e-11,4;UBERON:0004907,2.74e-09,5;UBERON:0004921,6.01e-09,118;UBERON:0001007,2.16e-07,145;UBERON:0001555,2.16e-07,145;UBERON:0007026,2.16e-07,145;UBERON:0004119,9.48e-07,160;UBERON:0000925,9.48e-07,160;UBERON:0006595,9.48e-07,160 | |||
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|short_description=p@chr13:28552898..28552907,- | |short_description=p@chr13:28552898..28552907,- | ||
}} | }} |
Latest revision as of 15:22, 24 July 2015
Short description: | p@chr13:28552898..28552907, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:28552898..28552907, - |
Coexpression cluster: | C1705_rectal_small_colon_temporal_duodenum_hepatoblastoma_appendix |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.14e-35 | 17 |
small intestine | 1.70e-32 | 4 |
gastrointestinal system | 5.65e-25 | 25 |
large intestine | 1.88e-15 | 11 |
rectum | 2.80e-11 | 4 |
lower digestive tract | 2.74e-09 | 5 |
subdivision of digestive tract | 6.01e-09 | 118 |
digestive system | 2.16e-07 | 145 |
digestive tract | 2.16e-07 | 145 |
primitive gut | 2.16e-07 | 145 |
endoderm-derived structure | 9.48e-07 | 160 |
endoderm | 9.48e-07 | 160 |
presumptive endoderm | 9.48e-07 | 160 |